RNA–Protein interactions for RNA: ENST00000283256.10

SCN2A-201, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN2A, Length 8,660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-201ENST00000283256 DNAH7Q8WXX0 4024 aa2.18□□□□□ -2.06
SCN2A-201ENST00000283256 MUC3AQ02505 3323 aa2.17□□□□□ -2.06
SCN2A-201ENST00000283256 KRTAP3-2Q9BYR7 98 aa2.16□□□□□ -2.06
SCN2A-201ENST00000283256 KRTAP3-3Q9BYR6 98 aa2.16□□□□□ -2.06
SCN2A-201ENST00000283256 CRCT1Q9UGL9 99 aa2.15□□□□□ -2.07
SCN2A-201ENST00000283256 KMT2AQ03164 3969 aa2.14□□□□□ -2.07
SCN2A-201ENST00000283256 FLGP20930 4061 aaPredicted RBP2.14□□□□□ -2.07
SCN2A-201ENST00000283256 SVEP1Q4LDE5 3571 aa2.13□□□□□ -2.07
SCN2A-201ENST00000283256 DNAH6Q9C0G6 4158 aa2.1□□□□□ -2.07
SCN2A-201ENST00000283256 ZNF469Q96JG9 3925 aaPredicted RBP2.1□□□□□ -2.07
SCN2A-201ENST00000283256 LCE3AQ5TA76 89 aa2.08□□□□□ -2.08
SCN2A-201ENST00000283256 HECTD4Q9Y4D8 3996 aa2.08□□□□□ -2.08
SCN2A-201ENST00000283256 KRTAP10-4P60372 401 aaPredicted RBP2.06□□□□□ -2.08
SCN2A-201ENST00000283256 DNHD1Q96M86 4753 aa2.05□□□□□ -2.08
SCN2A-201ENST00000283256 ANK2Q01484 3957 aa2.01□□□□□ -2.09
SCN2A-201ENST00000283256 PCLOQ9Y6V0 5065 aa2.01□□□□□ -2.09
SCN2A-201ENST00000283256 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
SCN2A-201ENST00000283256 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
SCN2A-201ENST00000283256 FRAS1Q86XX4 4008 aa1.95□□□□□ -2.1
SCN2A-201ENST00000283256 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
SCN2A-201ENST00000283256 RYR3Q15413 4870 aa1.94□□□□□ -2.1
SCN2A-201ENST00000283256 LORP23490 312 aaPredicted RBP1.93□□□□□ -2.1
SCN2A-201ENST00000283256 KRTAP8-1Q8IUC2 63 aa1.92□□□□□ -2.1
SCN2A-201ENST00000283256 MT1HL1P0DM35 61 aa1.92□□□□□ -2.1
SCN2A-201ENST00000283256 HUWE1Q7Z6Z7 4374 aaKnown RBP1.91□□□□□ -2.1
SCN2A-201ENST00000283256 HYDINQ4G0P3 5121 aa1.91□□□□□ -2.1
SCN2A-201ENST00000283256 LCE2DQ5TA82 110 aaPredicted RBP1.91□□□□□ -2.1
SCN2A-201ENST00000283256 RYR2Q92736 4967 aa1.9□□□□□ -2.11
SCN2A-201ENST00000283256 VPS13BQ7Z7G8 4022 aa1.89□□□□□ -2.11
SCN2A-201ENST00000283256 SPRR2GQ9BYE4 73 aa1.88□□□□□ -2.11
SCN2A-201ENST00000283256 UBR4Q5T4S7 5183 aa1.88□□□□□ -2.11
SCN2A-201ENST00000283256 DNAH2Q9P225 4427 aa1.88□□□□□ -2.11
SCN2A-201ENST00000283256 DNAH10Q8IVF4 4471 aa1.88□□□□□ -2.11
SCN2A-201ENST00000283256 DNAH1Q9P2D7 4330 aa1.82□□□□□ -2.12
SCN2A-201ENST00000283256 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
SCN2A-201ENST00000283256 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
SCN2A-201ENST00000283256 EPPK1P58107 5090 aaKnown RBP1.79□□□□□ -2.12
SCN2A-201ENST00000283256 DNAH11Q96DT5 4516 aa1.79□□□□□ -2.12
SCN2A-201ENST00000283256 LCE2AQ5TA79 106 aaPredicted RBP1.79□□□□□ -2.12
SCN2A-201ENST00000283256 ANK3Q12955 4377 aaKnown RBP1.79□□□□□ -2.12
SCN2A-201ENST00000283256 LCE3BQ5TA77 95 aa1.77□□□□□ -2.13
SCN2A-201ENST00000283256 PRKDCP78527 4128 aaKnown RBP1.77□□□□□ -2.13
SCN2A-201ENST00000283256 HERC1Q15751 4861 aa1.77□□□□□ -2.13
SCN2A-201ENST00000283256 KRTAP19-5Q3LI72 72 aa1.77□□□□□ -2.13
SCN2A-201ENST00000283256 KRTAP19-8Q3LI54 63 aa1.74□□□□□ -2.13
SCN2A-201ENST00000283256 ABCA13Q86UQ4 5058 aa1.72□□□□□ -2.13
SCN2A-201ENST00000283256 PRM1P04553 51 aa1.71□□□□□ -2.14
SCN2A-201ENST00000283256 DYNC1H1Q14204 4646 aaKnown RBP1.71□□□□□ -2.14
SCN2A-201ENST00000283256 DYNC2H1Q8NCM8 4307 aaKnown RBP1.7□□□□□ -2.14
SCN2A-201ENST00000283256 VPS13DQ5THJ4 4388 aa1.7□□□□□ -2.14
SCN2A-201ENST00000283256 KMT2CQ8NEZ4 4911 aaKnown RBP1.69□□□□□ -2.14
SCN2A-201ENST00000283256 KRTAP4-5Q9BYR2 181 aa1.69□□□□□ -2.14
SCN2A-201ENST00000283256 DNAH17Q9UFH2 4485 aa1.68□□□□□ -2.14
SCN2A-201ENST00000283256 DNAH5Q8TE73 4624 aa1.68□□□□□ -2.14
SCN2A-201ENST00000283256 PKHD1P08F94 4074 aa1.68□□□□□ -2.14
SCN2A-201ENST00000283256 LRP1Q07954 4544 aaKnown RBP1.67□□□□□ -2.14
SCN2A-201ENST00000283256 SPRR2FQ96RM1 72 aa1.66□□□□□ -2.14
SCN2A-201ENST00000283256 MT2AP02795 61 aa1.65□□□□□ -2.15
SCN2A-201ENST00000283256 PLECQ15149 4684 aaKnown RBP1.64□□□□□ -2.15
SCN2A-201ENST00000283256 MYCBP2O75592 4640 aa1.64□□□□□ -2.15
SCN2A-201ENST00000283256 DNAH9Q9NYC9 4486 aa1.63□□□□□ -2.15
SCN2A-201ENST00000283256 KRTAP19-1Q8IUB9 90 aa1.63□□□□□ -2.15
SCN2A-201ENST00000283256 DNAH8Q96JB1 4490 aa1.63□□□□□ -2.15
SCN2A-201ENST00000283256 FAT2Q9NYQ8 4349 aa1.62□□□□□ -2.15
SCN2A-201ENST00000283256 HERC2O95714 4834 aa1.62□□□□□ -2.15
SCN2A-201ENST00000283256 MT1HP80294 61 aa1.62□□□□□ -2.15
SCN2A-201ENST00000283256 HMCN2Q8NDA2 5059 aa1.61□□□□□ -2.15
SCN2A-201ENST00000283256 KIAA1109Q2LD37 5005 aa1.61□□□□□ -2.15
SCN2A-201ENST00000283256 SPRR2AP35326 72 aa1.6□□□□□ -2.15
SCN2A-201ENST00000283256 LCE2CQ5TA81 110 aa1.6□□□□□ -2.15
SCN2A-201ENST00000283256 BIRC6Q9NR09 4857 aa1.59□□□□□ -2.15
SCN2A-201ENST00000283256 PKHD1L1Q86WI1 4243 aa1.59□□□□□ -2.15
SCN2A-201ENST00000283256 SPRR2BP35325 72 aa1.59□□□□□ -2.16
SCN2A-201ENST00000283256 MT1XP80297 61 aa1.59□□□□□ -2.16
SCN2A-201ENST00000283256 MT1LQ93083 61 aa1.59□□□□□ -2.16
SCN2A-201ENST00000283256 STARD9Q9P2P6 4700 aa1.58□□□□□ -2.16
SCN2A-201ENST00000283256 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
SCN2A-201ENST00000283256 MT1FP04733 61 aa1.57□□□□□ -2.16
SCN2A-201ENST00000283256 RNF213Q63HN8 5207 aa1.57□□□□□ -2.16
SCN2A-201ENST00000283256 SPRR2EP22531 72 aa1.57□□□□□ -2.16
SCN2A-201ENST00000283256 LCE2BO14633 110 aa1.57□□□□□ -2.16
SCN2A-201ENST00000283256 MT1GP13640 62 aa1.56□□□□□ -2.16
SCN2A-201ENST00000283256 HSPG2P98160 4391 aa1.56□□□□□ -2.16
SCN2A-201ENST00000283256 SACSQ9NZJ4 4579 aa1.55□□□□□ -2.16
SCN2A-201ENST00000283256 PKD1P98161 4303 aa1.55□□□□□ -2.16
SCN2A-201ENST00000283256 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
SCN2A-201ENST00000283256 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
SCN2A-201ENST00000283256 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
SCN2A-201ENST00000283256 MT1EP04732 61 aa1.54□□□□□ -2.16
SCN2A-201ENST00000283256 SPRR2DP22532 72 aa1.53□□□□□ -2.16
SCN2A-201ENST00000283256 APOBP04114 4563 aaKnown RBP1.52□□□□□ -2.17
SCN2A-201ENST00000283256 LRP1BQ9NZR2 4599 aa1.52□□□□□ -2.17
SCN2A-201ENST00000283256 MT1BP07438 61 aa1.52□□□□□ -2.17
SCN2A-201ENST00000283256 FAT4Q6V0I7 4981 aa1.51□□□□□ -2.17
SCN2A-201ENST00000283256 FAT1Q14517 4588 aa1.49□□□□□ -2.17
SCN2A-201ENST00000283256 MT1AP04731 61 aa1.49□□□□□ -2.17
SCN2A-201ENST00000283256 KRTAP9-8Q9BYQ0 159 aa1.47□□□□□ -2.17
SCN2A-201ENST00000283256 TNXBP22105 4242 aa1.47□□□□□ -2.17
SCN2A-201ENST00000283256 KRTAP19-2Q3LHN2 52 aa1.47□□□□□ -2.17
SCN2A-201ENST00000283256 FAT3Q8TDW7 4589 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms