RNA–Protein interactions for RNA: ENST00000283256.10

SCN2A-201, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN2A, Length 8,660 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-201ENST00000283256 DNAH7Q8WXX0 4024 aa2.18□□□□□ -2.06
SCN2A-201ENST00000283256 MUC3AQ02505 3323 aa2.17□□□□□ -2.06
SCN2A-201ENST00000283256 KRTAP3-2Q9BYR7 98 aa2.16□□□□□ -2.06
SCN2A-201ENST00000283256 KRTAP3-3Q9BYR6 98 aa2.16□□□□□ -2.06
SCN2A-201ENST00000283256 CRCT1Q9UGL9 99 aa2.15□□□□□ -2.07
SCN2A-201ENST00000283256 KMT2AQ03164 3969 aa2.14□□□□□ -2.07
SCN2A-201ENST00000283256 FLGP20930 4061 aaPredicted RBP2.14□□□□□ -2.07
SCN2A-201ENST00000283256 SVEP1Q4LDE5 3571 aa2.13□□□□□ -2.07
SCN2A-201ENST00000283256 DNAH6Q9C0G6 4158 aa2.1□□□□□ -2.07
SCN2A-201ENST00000283256 ZNF469Q96JG9 3925 aaPredicted RBP2.1□□□□□ -2.07
SCN2A-201ENST00000283256 LCE3AQ5TA76 89 aa2.08□□□□□ -2.08
SCN2A-201ENST00000283256 HECTD4Q9Y4D8 3996 aa2.08□□□□□ -2.08
SCN2A-201ENST00000283256 KRTAP10-4P60372 401 aaPredicted RBP2.06□□□□□ -2.08
SCN2A-201ENST00000283256 DNHD1Q96M86 4753 aa2.05□□□□□ -2.08
SCN2A-201ENST00000283256 ANK2Q01484 3957 aa2.01□□□□□ -2.09
SCN2A-201ENST00000283256 PCLOQ9Y6V0 5065 aa2.01□□□□□ -2.09
SCN2A-201ENST00000283256 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
SCN2A-201ENST00000283256 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
SCN2A-201ENST00000283256 FRAS1Q86XX4 4008 aa1.95□□□□□ -2.1
SCN2A-201ENST00000283256 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
SCN2A-201ENST00000283256 RYR3Q15413 4870 aa1.94□□□□□ -2.1
SCN2A-201ENST00000283256 LORP23490 312 aaPredicted RBP1.93□□□□□ -2.1
SCN2A-201ENST00000283256 KRTAP8-1Q8IUC2 63 aa1.92□□□□□ -2.1
SCN2A-201ENST00000283256 MT1HL1P0DM35 61 aa1.92□□□□□ -2.1
SCN2A-201ENST00000283256 HUWE1Q7Z6Z7 4374 aaKnown RBP1.91□□□□□ -2.1
SCN2A-201ENST00000283256 HYDINQ4G0P3 5121 aa1.91□□□□□ -2.1
SCN2A-201ENST00000283256 LCE2DQ5TA82 110 aaPredicted RBP1.91□□□□□ -2.1
SCN2A-201ENST00000283256 RYR2Q92736 4967 aa1.9□□□□□ -2.11
SCN2A-201ENST00000283256 VPS13BQ7Z7G8 4022 aa1.89□□□□□ -2.11
SCN2A-201ENST00000283256 SPRR2GQ9BYE4 73 aa1.88□□□□□ -2.11
SCN2A-201ENST00000283256 UBR4Q5T4S7 5183 aa1.88□□□□□ -2.11
SCN2A-201ENST00000283256 DNAH2Q9P225 4427 aa1.88□□□□□ -2.11
SCN2A-201ENST00000283256 DNAH10Q8IVF4 4471 aa1.88□□□□□ -2.11
SCN2A-201ENST00000283256 DNAH1Q9P2D7 4330 aa1.82□□□□□ -2.12
SCN2A-201ENST00000283256 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
SCN2A-201ENST00000283256 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
SCN2A-201ENST00000283256 EPPK1P58107 5090 aaKnown RBP1.79□□□□□ -2.12
SCN2A-201ENST00000283256 DNAH11Q96DT5 4516 aa1.79□□□□□ -2.12
SCN2A-201ENST00000283256 LCE2AQ5TA79 106 aaPredicted RBP1.79□□□□□ -2.12
SCN2A-201ENST00000283256 ANK3Q12955 4377 aaKnown RBP1.79□□□□□ -2.12
SCN2A-201ENST00000283256 LCE3BQ5TA77 95 aa1.77□□□□□ -2.13
SCN2A-201ENST00000283256 PRKDCP78527 4128 aaKnown RBP1.77□□□□□ -2.13
SCN2A-201ENST00000283256 HERC1Q15751 4861 aa1.77□□□□□ -2.13
SCN2A-201ENST00000283256 KRTAP19-5Q3LI72 72 aa1.77□□□□□ -2.13
SCN2A-201ENST00000283256 KRTAP19-8Q3LI54 63 aa1.74□□□□□ -2.13
SCN2A-201ENST00000283256 ABCA13Q86UQ4 5058 aa1.72□□□□□ -2.13
SCN2A-201ENST00000283256 PRM1P04553 51 aa1.71□□□□□ -2.14
SCN2A-201ENST00000283256 DYNC1H1Q14204 4646 aaKnown RBP1.71□□□□□ -2.14
SCN2A-201ENST00000283256 DYNC2H1Q8NCM8 4307 aaKnown RBP1.7□□□□□ -2.14
SCN2A-201ENST00000283256 VPS13DQ5THJ4 4388 aa1.7□□□□□ -2.14
SCN2A-201ENST00000283256 KMT2CQ8NEZ4 4911 aaKnown RBP1.69□□□□□ -2.14
SCN2A-201ENST00000283256 KRTAP4-5Q9BYR2 181 aa1.69□□□□□ -2.14
SCN2A-201ENST00000283256 DNAH17Q9UFH2 4485 aa1.68□□□□□ -2.14
SCN2A-201ENST00000283256 DNAH5Q8TE73 4624 aa1.68□□□□□ -2.14
SCN2A-201ENST00000283256 PKHD1P08F94 4074 aa1.68□□□□□ -2.14
SCN2A-201ENST00000283256 LRP1Q07954 4544 aaKnown RBP1.67□□□□□ -2.14
SCN2A-201ENST00000283256 SPRR2FQ96RM1 72 aa1.66□□□□□ -2.14
SCN2A-201ENST00000283256 MT2AP02795 61 aa1.65□□□□□ -2.15
SCN2A-201ENST00000283256 PLECQ15149 4684 aaKnown RBP1.64□□□□□ -2.15
SCN2A-201ENST00000283256 MYCBP2O75592 4640 aa1.64□□□□□ -2.15
SCN2A-201ENST00000283256 DNAH9Q9NYC9 4486 aa1.63□□□□□ -2.15
SCN2A-201ENST00000283256 KRTAP19-1Q8IUB9 90 aa1.63□□□□□ -2.15
SCN2A-201ENST00000283256 DNAH8Q96JB1 4490 aa1.63□□□□□ -2.15
SCN2A-201ENST00000283256 FAT2Q9NYQ8 4349 aa1.62□□□□□ -2.15
SCN2A-201ENST00000283256 HERC2O95714 4834 aa1.62□□□□□ -2.15
SCN2A-201ENST00000283256 MT1HP80294 61 aa1.62□□□□□ -2.15
SCN2A-201ENST00000283256 HMCN2Q8NDA2 5059 aa1.61□□□□□ -2.15
SCN2A-201ENST00000283256 KIAA1109Q2LD37 5005 aa1.61□□□□□ -2.15
SCN2A-201ENST00000283256 SPRR2AP35326 72 aa1.6□□□□□ -2.15
SCN2A-201ENST00000283256 LCE2CQ5TA81 110 aa1.6□□□□□ -2.15
SCN2A-201ENST00000283256 BIRC6Q9NR09 4857 aa1.59□□□□□ -2.15
SCN2A-201ENST00000283256 PKHD1L1Q86WI1 4243 aa1.59□□□□□ -2.15
SCN2A-201ENST00000283256 SPRR2BP35325 72 aa1.59□□□□□ -2.16
SCN2A-201ENST00000283256 MT1XP80297 61 aa1.59□□□□□ -2.16
SCN2A-201ENST00000283256 MT1LQ93083 61 aa1.59□□□□□ -2.16
SCN2A-201ENST00000283256 STARD9Q9P2P6 4700 aa1.58□□□□□ -2.16
SCN2A-201ENST00000283256 KRTAP4-1Q9BYQ7 146 aa1.58□□□□□ -2.16
SCN2A-201ENST00000283256 MT1FP04733 61 aa1.57□□□□□ -2.16
SCN2A-201ENST00000283256 RNF213Q63HN8 5207 aa1.57□□□□□ -2.16
SCN2A-201ENST00000283256 SPRR2EP22531 72 aa1.57□□□□□ -2.16
SCN2A-201ENST00000283256 LCE2BO14633 110 aa1.57□□□□□ -2.16
SCN2A-201ENST00000283256 MT1GP13640 62 aa1.56□□□□□ -2.16
SCN2A-201ENST00000283256 HSPG2P98160 4391 aa1.56□□□□□ -2.16
SCN2A-201ENST00000283256 SACSQ9NZJ4 4579 aa1.55□□□□□ -2.16
SCN2A-201ENST00000283256 PKD1P98161 4303 aa1.55□□□□□ -2.16
SCN2A-201ENST00000283256 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
SCN2A-201ENST00000283256 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
SCN2A-201ENST00000283256 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
SCN2A-201ENST00000283256 MT1EP04732 61 aa1.54□□□□□ -2.16
SCN2A-201ENST00000283256 SPRR2DP22532 72 aa1.53□□□□□ -2.16
SCN2A-201ENST00000283256 APOBP04114 4563 aaKnown RBP1.52□□□□□ -2.17
SCN2A-201ENST00000283256 LRP1BQ9NZR2 4599 aa1.52□□□□□ -2.17
SCN2A-201ENST00000283256 MT1BP07438 61 aa1.52□□□□□ -2.17
SCN2A-201ENST00000283256 FAT4Q6V0I7 4981 aa1.51□□□□□ -2.17
SCN2A-201ENST00000283256 FAT1Q14517 4588 aa1.49□□□□□ -2.17
SCN2A-201ENST00000283256 MT1AP04731 61 aa1.49□□□□□ -2.17
SCN2A-201ENST00000283256 KRTAP9-8Q9BYQ0 159 aa1.47□□□□□ -2.17
SCN2A-201ENST00000283256 TNXBP22105 4242 aa1.47□□□□□ -2.17
SCN2A-201ENST00000283256 KRTAP19-2Q3LHN2 52 aa1.47□□□□□ -2.17
SCN2A-201ENST00000283256 FAT3Q8TDW7 4589 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms