RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 IGLV7-46A0A075B6I9 117 aa5.99□□□□□ -1.45
GGPS1-201ENST00000282841 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
GGPS1-201ENST00000282841 LRP2P98164 4655 aa5.97□□□□□ -1.45
GGPS1-201ENST00000282841 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
GGPS1-201ENST00000282841 IGKV2-30P06310 120 aa5.97□□□□□ -1.45
GGPS1-201ENST00000282841 H3BPC8 53 aa5.97□□□□□ -1.45
GGPS1-201ENST00000282841 HERC1Q15751 4861 aa5.95□□□□□ -1.46
GGPS1-201ENST00000282841 HRES1P13985 223 aa5.92□□□□□ -1.46
GGPS1-201ENST00000282841 J3QL48 77 aa5.92□□□□□ -1.46
GGPS1-201ENST00000282841 SPATA8Q6RVD6 105 aa5.9□□□□□ -1.47
GGPS1-201ENST00000282841 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
GGPS1-201ENST00000282841 A8MUU9 505 aa5.88□□□□□ -1.47
GGPS1-201ENST00000282841 C20orf166-AS1Q96NR2 134 aa5.88□□□□□ -1.47
GGPS1-201ENST00000282841 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
GGPS1-201ENST00000282841 XP32Q5T750 250 aa5.87□□□□□ -1.47
GGPS1-201ENST00000282841 A0A1B0GU69 56 aa5.85□□□□□ -1.47
GGPS1-201ENST00000282841 UQCR11O14957 56 aa5.82□□□□□ -1.48
GGPS1-201ENST00000282841 MUC2Q02817 5179 aa5.81□□□□□ -1.48
GGPS1-201ENST00000282841 RPL37P61927 97 aaKnown RBP5.78□□□□□ -1.48
GGPS1-201ENST00000282841 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
GGPS1-201ENST00000282841 CRIPTQ9P021 101 aa5.76□□□□□ -1.49
GGPS1-201ENST00000282841 SPINT4Q6UDR6 99 aa5.74□□□□□ -1.49
GGPS1-201ENST00000282841 TPRXLQ17RH7 258 aa5.73□□□□□ -1.49
GGPS1-201ENST00000282841 KRTAP3-1Q9BYR8 98 aa5.7□□□□□ -1.5
GGPS1-201ENST00000282841 HMCN2Q8NDA2 5059 aa5.69□□□□□ -1.5
GGPS1-201ENST00000282841 DMAC1Q96GE9 116 aa5.69□□□□□ -1.5
GGPS1-201ENST00000282841 ACYP2P14621 99 aa5.67□□□□□ -1.5
GGPS1-201ENST00000282841 SEC61BP60468 96 aaKnown RBP5.67□□□□□ -1.5
GGPS1-201ENST00000282841 RNF213Q63HN8 5207 aa5.64□□□□□ -1.51
GGPS1-201ENST00000282841 UBR4Q5T4S7 5183 aa5.62□□□□□ -1.51
GGPS1-201ENST00000282841 K7ERS5 55 aa5.62□□□□□ -1.51
GGPS1-201ENST00000282841 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
GGPS1-201ENST00000282841 MUC17Q685J3 4493 aa5.59□□□□□ -1.51
GGPS1-201ENST00000282841 COX6B2Q6YFQ2 88 aa5.59□□□□□ -1.51
GGPS1-201ENST00000282841 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
GGPS1-201ENST00000282841 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.53
GGPS1-201ENST00000282841 KRTAP3-3Q9BYR6 98 aa5.46□□□□□ -1.53
GGPS1-201ENST00000282841 H0YAA0 97 aa5.45□□□□□ -1.54
GGPS1-201ENST00000282841 S4R3F8 94 aa5.45□□□□□ -1.54
GGPS1-201ENST00000282841 H1FX-AS1Q4G0G2 97 aa5.44□□□□□ -1.54
GGPS1-201ENST00000282841 KRTAP19-2Q3LHN2 52 aa5.37□□□□□ -1.55
GGPS1-201ENST00000282841 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
GGPS1-201ENST00000282841 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
GGPS1-201ENST00000282841 A0A1B0GU33 70 aa5.29□□□□□ -1.56
GGPS1-201ENST00000282841 KRTAP3-2Q9BYR7 98 aa5.28□□□□□ -1.56
GGPS1-201ENST00000282841 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
GGPS1-201ENST00000282841 LCE2CQ5TA81 110 aa5.25□□□□□ -1.57
GGPS1-201ENST00000282841 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
GGPS1-201ENST00000282841 A0A0D9SG42 100 aa5.19□□□□□ -1.58
GGPS1-201ENST00000282841 LORP23490 312 aaPredicted RBP5.19□□□□□ -1.58
GGPS1-201ENST00000282841 M0R2T5 61 aa5.18□□□□□ -1.58
GGPS1-201ENST00000282841 MT1HP80294 61 aa5.14□□□□□ -1.59
GGPS1-201ENST00000282841 CAMK2N1Q7Z7J9 78 aa5.11□□□□□ -1.59
GGPS1-201ENST00000282841 M0QZ58 72 aa5.08□□□□□ -1.6
GGPS1-201ENST00000282841 R4GN34 69 aa5.06□□□□□ -1.6
GGPS1-201ENST00000282841 KRTAP12-2P59991 146 aa5□□□□□ -1.61
GGPS1-201ENST00000282841 MT1FP04733 61 aa4.96□□□□□ -1.62
GGPS1-201ENST00000282841 KRTAP10-10P60014 251 aa4.96□□□□□ -1.62
GGPS1-201ENST00000282841 MT2AP02795 61 aa4.95□□□□□ -1.62
GGPS1-201ENST00000282841 KRTAP9-8Q9BYQ0 159 aa4.95□□□□□ -1.62
GGPS1-201ENST00000282841 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
GGPS1-201ENST00000282841 PLAC4Q8WY50 150 aa4.94□□□□□ -1.62
GGPS1-201ENST00000282841 USH2AO75445 5202 aa4.86□□□□□ -1.63
GGPS1-201ENST00000282841 KRTAP19-1Q8IUB9 90 aa4.86□□□□□ -1.63
GGPS1-201ENST00000282841 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.63
GGPS1-201ENST00000282841 LCE2AQ5TA79 106 aaPredicted RBP4.83□□□□□ -1.64
GGPS1-201ENST00000282841 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
GGPS1-201ENST00000282841 LCE2DQ5TA82 110 aaPredicted RBP4.8□□□□□ -1.64
GGPS1-201ENST00000282841 SPRR2GQ9BYE4 73 aa4.78□□□□□ -1.64
GGPS1-201ENST00000282841 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
GGPS1-201ENST00000282841 LCE2BO14633 110 aa4.68□□□□□ -1.66
GGPS1-201ENST00000282841 MT1BP07438 61 aa4.67□□□□□ -1.66
GGPS1-201ENST00000282841 KRTAP19-8Q3LI54 63 aa4.62□□□□□ -1.67
GGPS1-201ENST00000282841 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
GGPS1-201ENST00000282841 KMT2DO14686 5537 aa4.54□□□□□ -1.68
GGPS1-201ENST00000282841 MT1XP80297 61 aa4.54□□□□□ -1.68
GGPS1-201ENST00000282841 KRTAP10-5P60370 271 aa4.53□□□□□ -1.68
GGPS1-201ENST00000282841 INE1O15225 51 aa4.51□□□□□ -1.69
GGPS1-201ENST00000282841 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
GGPS1-201ENST00000282841 TNP1P09430 55 aa4.46□□□□□ -1.7
GGPS1-201ENST00000282841 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
GGPS1-201ENST00000282841 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
GGPS1-201ENST00000282841 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
GGPS1-201ENST00000282841 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
GGPS1-201ENST00000282841 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
GGPS1-201ENST00000282841 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
GGPS1-201ENST00000282841 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
GGPS1-201ENST00000282841 KRTAP10-12P60413 245 aa4.3□□□□□ -1.72
GGPS1-201ENST00000282841 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
GGPS1-201ENST00000282841 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
GGPS1-201ENST00000282841 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
GGPS1-201ENST00000282841 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
GGPS1-201ENST00000282841 KRTAP19-5Q3LI72 72 aa4.16□□□□□ -1.74
GGPS1-201ENST00000282841 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.75
GGPS1-201ENST00000282841 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
GGPS1-201ENST00000282841 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
GGPS1-201ENST00000282841 CRCT1Q9UGL9 99 aa4.07□□□□□ -1.76
GGPS1-201ENST00000282841 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
GGPS1-201ENST00000282841 KRTAP9-6A0A140TA67 174 aa3.97□□□□□ -1.77
GGPS1-201ENST00000282841 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms