RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
SEC16A-201ENST00000277537 FAT2Q9NYQ8 4349 aa4.72□□□□□ -1.65
SEC16A-201ENST00000277537 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
SEC16A-201ENST00000277537 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
SEC16A-201ENST00000277537 KRTAP4-5Q9BYR2 181 aa4.7□□□□□ -1.66
SEC16A-201ENST00000277537 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
SEC16A-201ENST00000277537 RYR2Q92736 4967 aa4.69□□□□□ -1.66
SEC16A-201ENST00000277537 RYR3Q15413 4870 aa4.69□□□□□ -1.66
SEC16A-201ENST00000277537 LRP1Q07954 4544 aaKnown RBP4.68□□□□□ -1.66
SEC16A-201ENST00000277537 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
SEC16A-201ENST00000277537 MYCBP2O75592 4640 aa4.67□□□□□ -1.66
SEC16A-201ENST00000277537 PKD1P98161 4303 aa4.67□□□□□ -1.66
SEC16A-201ENST00000277537 RYR1P21817 5038 aa4.66□□□□□ -1.66
SEC16A-201ENST00000277537 H1FX-AS1Q4G0G2 97 aa4.66□□□□□ -1.66
SEC16A-201ENST00000277537 TPRXLQ17RH7 258 aa4.65□□□□□ -1.67
SEC16A-201ENST00000277537 KRTAP3-1Q9BYR8 98 aa4.63□□□□□ -1.67
SEC16A-201ENST00000277537 KRTAP17-1Q9BYP8 105 aa4.6□□□□□ -1.67
SEC16A-201ENST00000277537 FAT3Q8TDW7 4589 aa4.59□□□□□ -1.67
SEC16A-201ENST00000277537 H0YAA0 97 aa4.59□□□□□ -1.68
SEC16A-201ENST00000277537 M0R2T5 61 aa4.58□□□□□ -1.68
SEC16A-201ENST00000277537 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
SEC16A-201ENST00000277537 R4GN34 69 aa4.57□□□□□ -1.68
SEC16A-201ENST00000277537 M0QZ58 72 aa4.54□□□□□ -1.68
SEC16A-201ENST00000277537 ROMO1P60602 79 aa4.51□□□□□ -1.69
SEC16A-201ENST00000277537 P0C880 135 aa4.51□□□□□ -1.69
SEC16A-201ENST00000277537 HSPG2P98160 4391 aa4.51□□□□□ -1.69
SEC16A-201ENST00000277537 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
SEC16A-201ENST00000277537 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
SEC16A-201ENST00000277537 EPPK1P58107 5090 aaKnown RBP4.47□□□□□ -1.69
SEC16A-201ENST00000277537 PKHD1L1Q86WI1 4243 aa4.44□□□□□ -1.7
SEC16A-201ENST00000277537 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
SEC16A-201ENST00000277537 KRTAP3-3Q9BYR6 98 aa4.4□□□□□ -1.7
SEC16A-201ENST00000277537 HERC2O95714 4834 aa4.4□□□□□ -1.7
SEC16A-201ENST00000277537 LRP2P98164 4655 aa4.4□□□□□ -1.71
SEC16A-201ENST00000277537 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
SEC16A-201ENST00000277537 KRTAP10-6P60371 365 aaPredicted RBP4.37□□□□□ -1.71
SEC16A-201ENST00000277537 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
SEC16A-201ENST00000277537 LPAP08519 4548 aa4.32□□□□□ -1.72
SEC16A-201ENST00000277537 TNXBP22105 4242 aa4.31□□□□□ -1.72
SEC16A-201ENST00000277537 KRTAP3-2Q9BYR7 98 aa4.31□□□□□ -1.72
SEC16A-201ENST00000277537 KRTAP4-1Q9BYQ7 146 aa4.29□□□□□ -1.72
SEC16A-201ENST00000277537 ABCA13Q86UQ4 5058 aa4.29□□□□□ -1.72
SEC16A-201ENST00000277537 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
SEC16A-201ENST00000277537 BIRC6Q9NR09 4857 aa4.26□□□□□ -1.73
SEC16A-201ENST00000277537 PLAC4Q8WY50 150 aa4.22□□□□□ -1.73
SEC16A-201ENST00000277537 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
SEC16A-201ENST00000277537 KRTAP10-10P60014 251 aa4.21□□□□□ -1.74
SEC16A-201ENST00000277537 LORP23490 312 aaPredicted RBP4.17□□□□□ -1.74
SEC16A-201ENST00000277537 HERC1Q15751 4861 aa4.14□□□□□ -1.75
SEC16A-201ENST00000277537 MUC2Q02817 5179 aa4.12□□□□□ -1.75
SEC16A-201ENST00000277537 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
SEC16A-201ENST00000277537 TNP1P09430 55 aa4.07□□□□□ -1.76
SEC16A-201ENST00000277537 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
SEC16A-201ENST00000277537 RNF213Q63HN8 5207 aa4.02□□□□□ -1.77
SEC16A-201ENST00000277537 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
SEC16A-201ENST00000277537 MT1HP80294 61 aa3.96□□□□□ -1.78
SEC16A-201ENST00000277537 UBR4Q5T4S7 5183 aa3.96□□□□□ -1.78
SEC16A-201ENST00000277537 HMCN2Q8NDA2 5059 aa3.92□□□□□ -1.78
SEC16A-201ENST00000277537 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
SEC16A-201ENST00000277537 KRTAP19-2Q3LHN2 52 aa3.9□□□□□ -1.78
SEC16A-201ENST00000277537 LCE2CQ5TA81 110 aa3.88□□□□□ -1.79
SEC16A-201ENST00000277537 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
SEC16A-201ENST00000277537 MT2AP02795 61 aa3.87□□□□□ -1.79
SEC16A-201ENST00000277537 MT1FP04733 61 aa3.86□□□□□ -1.79
SEC16A-201ENST00000277537 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
SEC16A-201ENST00000277537 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
SEC16A-201ENST00000277537 SPRR2GQ9BYE4 73 aa3.79□□□□□ -1.8
SEC16A-201ENST00000277537 KRTAP19-1Q8IUB9 90 aa3.78□□□□□ -1.8
SEC16A-201ENST00000277537 FSIP2Q5CZC0 6907 aa3.78□□□□□ -1.8
SEC16A-201ENST00000277537 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
SEC16A-201ENST00000277537 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
SEC16A-201ENST00000277537 KRTAP10-12P60413 245 aa3.68□□□□□ -1.82
SEC16A-201ENST00000277537 LCE2DQ5TA82 110 aaPredicted RBP3.63□□□□□ -1.83
SEC16A-201ENST00000277537 MT1BP07438 61 aa3.61□□□□□ -1.83
SEC16A-201ENST00000277537 KRTAP19-8Q3LI54 63 aa3.6□□□□□ -1.83
SEC16A-201ENST00000277537 KRTAP9-3Q9BYQ3 159 aa3.6□□□□□ -1.83
SEC16A-201ENST00000277537 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
SEC16A-201ENST00000277537 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
SEC16A-201ENST00000277537 MT1XP80297 61 aa3.56□□□□□ -1.84
SEC16A-201ENST00000277537 KRTAP10-5P60370 271 aa3.54□□□□□ -1.84
SEC16A-201ENST00000277537 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
SEC16A-201ENST00000277537 LCE2BO14633 110 aa3.52□□□□□ -1.85
SEC16A-201ENST00000277537 USH2AO75445 5202 aa3.52□□□□□ -1.85
SEC16A-201ENST00000277537 INE1O15225 51 aa3.49□□□□□ -1.85
SEC16A-201ENST00000277537 LCE2AQ5TA79 106 aaPredicted RBP3.47□□□□□ -1.85
SEC16A-201ENST00000277537 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
SEC16A-201ENST00000277537 KRTAP8-1Q8IUC2 63 aa3.44□□□□□ -1.86
SEC16A-201ENST00000277537 KRTAP4-8A0A0G2JLE6 195 aa3.43□□□□□ -1.86
SEC16A-201ENST00000277537 KRTAP4-8Q9BYQ9 185 aa3.43□□□□□ -1.86
SEC16A-201ENST00000277537 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
SEC16A-201ENST00000277537 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
SEC16A-201ENST00000277537 KMT2DO14686 5537 aa3.36□□□□□ -1.87
SEC16A-201ENST00000277537 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
SEC16A-201ENST00000277537 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
SEC16A-201ENST00000277537 KRTAP9-2Q9BYQ4 174 aa3.26□□□□□ -1.89
SEC16A-201ENST00000277537 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
SEC16A-201ENST00000277537 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
SEC16A-201ENST00000277537 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
SEC16A-201ENST00000277537 KRTAP4-7Q9BYR0 210 aa3.2□□□□□ -1.9
SEC16A-201ENST00000277537 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms