RNA–Protein interactions for RNA: ENST00000274170.8

CDH18-201, Transcript of cadherin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH18, Length 2,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-201ENST00000274170 IGKV2-30P06310 120 aa4.34□□□□□ -1.71
CDH18-201ENST00000274170 ROMO1P60602 79 aa4.33□□□□□ -1.72
CDH18-201ENST00000274170 RPS29P62273 56 aaKnown RBP4.33□□□□□ -1.72
CDH18-201ENST00000274170 KRTAP13-2Q52LG2 175 aa4.32□□□□□ -1.72
CDH18-201ENST00000274170 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
CDH18-201ENST00000274170 TYMSOSQ8TAI1 123 aa4.32□□□□□ -1.72
CDH18-201ENST00000274170 A8MUU9 505 aa4.31□□□□□ -1.72
CDH18-201ENST00000274170 SSBP3-AS1Q7Z2R9 100 aa4.3□□□□□ -1.72
CDH18-201ENST00000274170 LINC00304Q8N9R0 145 aa4.29□□□□□ -1.72
CDH18-201ENST00000274170 ANAPC11Q9NYG5 84 aa4.28□□□□□ -1.72
CDH18-201ENST00000274170 IGKV2D-30A0A075B6S6 120 aa4.27□□□□□ -1.73
CDH18-201ENST00000274170 P0C880 135 aa4.27□□□□□ -1.73
CDH18-201ENST00000274170 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
CDH18-201ENST00000274170 H0YAA0 97 aa4.26□□□□□ -1.73
CDH18-201ENST00000274170 SPINK1P00995 79 aa4.26□□□□□ -1.73
CDH18-201ENST00000274170 TPRXLQ17RH7 258 aa4.23□□□□□ -1.73
CDH18-201ENST00000274170 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
CDH18-201ENST00000274170 MUC17Q685J3 4493 aa4.2□□□□□ -1.74
CDH18-201ENST00000274170 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
CDH18-201ENST00000274170 A0A1B0GU33 70 aa4.13□□□□□ -1.75
CDH18-201ENST00000274170 LRP2P98164 4655 aa4.12□□□□□ -1.75
CDH18-201ENST00000274170 XP32Q5T750 250 aa4.12□□□□□ -1.75
CDH18-201ENST00000274170 LPAP08519 4548 aa4.12□□□□□ -1.75
CDH18-201ENST00000274170 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
CDH18-201ENST00000274170 C20orf166-AS1Q96NR2 134 aa4.1□□□□□ -1.75
CDH18-201ENST00000274170 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
CDH18-201ENST00000274170 CRIPTQ9P021 101 aa4.09□□□□□ -1.75
CDH18-201ENST00000274170 UBR4Q5T4S7 5183 aa4.08□□□□□ -1.76
CDH18-201ENST00000274170 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
CDH18-201ENST00000274170 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
CDH18-201ENST00000274170 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
CDH18-201ENST00000274170 K7ERS5 55 aa4.03□□□□□ -1.76
CDH18-201ENST00000274170 COX6B2Q6YFQ2 88 aa4.03□□□□□ -1.76
CDH18-201ENST00000274170 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
CDH18-201ENST00000274170 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
CDH18-201ENST00000274170 LCE2AQ5TA79 106 aaPredicted RBP3.98□□□□□ -1.77
CDH18-201ENST00000274170 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
CDH18-201ENST00000274170 KRTAP13-4Q3LI77 160 aa3.95□□□□□ -1.78
CDH18-201ENST00000274170 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
CDH18-201ENST00000274170 C10orf95Q9H7T3 257 aa3.94□□□□□ -1.78
CDH18-201ENST00000274170 C9orf92A6NGG3 77 aa3.93□□□□□ -1.78
CDH18-201ENST00000274170 KRTAP19-2Q3LHN2 52 aa3.91□□□□□ -1.78
CDH18-201ENST00000274170 KRTAP3-2Q9BYR7 98 aa3.9□□□□□ -1.78
CDH18-201ENST00000274170 LCE2CQ5TA81 110 aa3.9□□□□□ -1.79
CDH18-201ENST00000274170 KRTAP3-3Q9BYR6 98 aa3.88□□□□□ -1.79
CDH18-201ENST00000274170 FAT4Q6V0I7 4981 aa3.88□□□□□ -1.79
CDH18-201ENST00000274170 A0A0D9SG42 100 aa3.85□□□□□ -1.79
CDH18-201ENST00000274170 S4R3F8 94 aa3.85□□□□□ -1.79
CDH18-201ENST00000274170 MUC2Q02817 5179 aa3.84□□□□□ -1.8
CDH18-201ENST00000274170 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
CDH18-201ENST00000274170 MT1HP80294 61 aa3.83□□□□□ -1.8
CDH18-201ENST00000274170 LCE2DQ5TA82 110 aaPredicted RBP3.81□□□□□ -1.8
CDH18-201ENST00000274170 KRTAP12-1P59990 96 aa3.79□□□□□ -1.8
CDH18-201ENST00000274170 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
CDH18-201ENST00000274170 LORP23490 312 aaPredicted RBP3.76□□□□□ -1.81
CDH18-201ENST00000274170 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
CDH18-201ENST00000274170 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
CDH18-201ENST00000274170 M0R2T5 61 aa3.66□□□□□ -1.82
CDH18-201ENST00000274170 PLAC4Q8WY50 150 aa3.65□□□□□ -1.82
CDH18-201ENST00000274170 M0QZ58 72 aa3.65□□□□□ -1.83
CDH18-201ENST00000274170 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
CDH18-201ENST00000274170 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
CDH18-201ENST00000274170 MT2AP02795 61 aa3.58□□□□□ -1.84
CDH18-201ENST00000274170 CRCT1Q9UGL9 99 aa3.57□□□□□ -1.84
CDH18-201ENST00000274170 KRTAP9-3Q9BYQ3 159 aa3.54□□□□□ -1.84
CDH18-201ENST00000274170 MT1FP04733 61 aa3.53□□□□□ -1.84
CDH18-201ENST00000274170 PRO2289Q9P1D8 64 aa3.49□□□□□ -1.85
CDH18-201ENST00000274170 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
CDH18-201ENST00000274170 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
CDH18-201ENST00000274170 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
CDH18-201ENST00000274170 LCE2BO14633 110 aa3.46□□□□□ -1.86
CDH18-201ENST00000274170 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
CDH18-201ENST00000274170 R4GN34 69 aa3.45□□□□□ -1.86
CDH18-201ENST00000274170 KRTAP19-6Q3LI70 58 aa3.41□□□□□ -1.86
CDH18-201ENST00000274170 SPRR2GQ9BYE4 73 aa3.38□□□□□ -1.87
CDH18-201ENST00000274170 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
CDH18-201ENST00000274170 USH2AO75445 5202 aa3.37□□□□□ -1.87
CDH18-201ENST00000274170 KRTAP19-8Q3LI54 63 aa3.37□□□□□ -1.87
CDH18-201ENST00000274170 SSPOA2VEC9 5147 aa3.33□□□□□ -1.88
CDH18-201ENST00000274170 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
CDH18-201ENST00000274170 MT1BP07438 61 aa3.29□□□□□ -1.88
CDH18-201ENST00000274170 FSIP2Q5CZC0 6907 aa3.26□□□□□ -1.89
CDH18-201ENST00000274170 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
CDH18-201ENST00000274170 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
CDH18-201ENST00000274170 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
CDH18-201ENST00000274170 TNP1P09430 55 aa3.23□□□□□ -1.89
CDH18-201ENST00000274170 INE1O15225 51 aa3.23□□□□□ -1.89
CDH18-201ENST00000274170 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
CDH18-201ENST00000274170 MACF1Q9UPN3 7388 aaKnown RBP3.1□□□□□ -1.91
CDH18-201ENST00000274170 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CDH18-201ENST00000274170 MT1XP80297 61 aa3.1□□□□□ -1.91
CDH18-201ENST00000274170 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
CDH18-201ENST00000274170 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
CDH18-201ENST00000274170 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
CDH18-201ENST00000274170 KRTAP10-12P60413 245 aa3□□□□□ -1.93
CDH18-201ENST00000274170 NEBP20929 6669 aa2.98□□□□□ -1.93
CDH18-201ENST00000274170 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
CDH18-201ENST00000274170 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
CDH18-201ENST00000274170 SPRR2FQ96RM1 72 aa2.89□□□□□ -1.95
CDH18-201ENST00000274170 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms