RNA–Protein interactions for RNA: ENST00000272433.6

SFXN5-201, Transcript of sideroflexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN5, Length 4,140 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-201ENST00000272433 DNAH8Q96JB1 4490 aa5.72□□□□□ -1.49
SFXN5-201ENST00000272433 ALMS1Q8TCU4 4167 aa5.72□□□□□ -1.49
SFXN5-201ENST00000272433 FRAS1Q86XX4 4008 aa5.69□□□□□ -1.5
SFXN5-201ENST00000272433 HYDINQ4G0P3 5121 aa5.69□□□□□ -1.5
SFXN5-201ENST00000272433 RYR1P21817 5038 aa5.68□□□□□ -1.5
SFXN5-201ENST00000272433 DNAH6Q9C0G6 4158 aa5.68□□□□□ -1.5
SFXN5-201ENST00000272433 HECTD4Q9Y4D8 3996 aa5.67□□□□□ -1.5
SFXN5-201ENST00000272433 LUZP6Q538Z0 58 aa5.67□□□□□ -1.5
SFXN5-201ENST00000272433 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
SFXN5-201ENST00000272433 RYR3Q15413 4870 aa5.63□□□□□ -1.51
SFXN5-201ENST00000272433 NDUFAF8A1L188 74 aa5.63□□□□□ -1.51
SFXN5-201ENST00000272433 KRTAP3-1Q9BYR8 98 aa5.61□□□□□ -1.51
SFXN5-201ENST00000272433 VPS13BQ7Z7G8 4022 aa5.61□□□□□ -1.51
SFXN5-201ENST00000272433 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
SFXN5-201ENST00000272433 KMT2CQ8NEZ4 4911 aaKnown RBP5.6□□□□□ -1.51
SFXN5-201ENST00000272433 SACSQ9NZJ4 4579 aa5.59□□□□□ -1.51
SFXN5-201ENST00000272433 P0C880 135 aa5.59□□□□□ -1.51
SFXN5-201ENST00000272433 PKHD1P08F94 4074 aa5.59□□□□□ -1.52
SFXN5-201ENST00000272433 APOBP04114 4563 aaKnown RBP5.55□□□□□ -1.52
SFXN5-201ENST00000272433 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
SFXN5-201ENST00000272433 PKD1P98161 4303 aa5.54□□□□□ -1.52
SFXN5-201ENST00000272433 FAT2Q9NYQ8 4349 aa5.54□□□□□ -1.52
SFXN5-201ENST00000272433 H0YAA0 97 aa5.52□□□□□ -1.53
SFXN5-201ENST00000272433 FAT3Q8TDW7 4589 aa5.52□□□□□ -1.53
SFXN5-201ENST00000272433 RYR2Q92736 4967 aa5.51□□□□□ -1.53
SFXN5-201ENST00000272433 KRTAP17-1Q9BYP8 105 aa5.5□□□□□ -1.53
SFXN5-201ENST00000272433 PLAC4Q8WY50 150 aa5.46□□□□□ -1.54
SFXN5-201ENST00000272433 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
SFXN5-201ENST00000272433 C10orf95Q9H7T3 257 aa5.4□□□□□ -1.54
SFXN5-201ENST00000272433 HERC2O95714 4834 aa5.34□□□□□ -1.56
SFXN5-201ENST00000272433 KRTAP3-3Q9BYR6 98 aa5.31□□□□□ -1.56
SFXN5-201ENST00000272433 KRTAP10-6P60371 365 aaPredicted RBP5.3□□□□□ -1.56
SFXN5-201ENST00000272433 KRTAP13-4Q3LI77 160 aa5.29□□□□□ -1.56
SFXN5-201ENST00000272433 EPPK1P58107 5090 aaKnown RBP5.28□□□□□ -1.56
SFXN5-201ENST00000272433 LRP2P98164 4655 aa5.27□□□□□ -1.57
SFXN5-201ENST00000272433 HSPG2P98160 4391 aa5.26□□□□□ -1.57
SFXN5-201ENST00000272433 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
SFXN5-201ENST00000272433 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
SFXN5-201ENST00000272433 KRTAP3-2Q9BYR7 98 aa5.2□□□□□ -1.58
SFXN5-201ENST00000272433 TNP1P09430 55 aa5.19□□□□□ -1.58
SFXN5-201ENST00000272433 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
SFXN5-201ENST00000272433 BIRC6Q9NR09 4857 aa5.13□□□□□ -1.59
SFXN5-201ENST00000272433 ABCA13Q86UQ4 5058 aa5.1□□□□□ -1.59
SFXN5-201ENST00000272433 LORP23490 312 aaPredicted RBP5.1□□□□□ -1.59
SFXN5-201ENST00000272433 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.59
SFXN5-201ENST00000272433 LPAP08519 4548 aa5.08□□□□□ -1.6
SFXN5-201ENST00000272433 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
SFXN5-201ENST00000272433 PCLOQ9Y6V0 5065 aa4.95□□□□□ -1.62
SFXN5-201ENST00000272433 HERC1Q15751 4861 aa4.94□□□□□ -1.62
SFXN5-201ENST00000272433 TNXBP22105 4242 aa4.94□□□□□ -1.62
SFXN5-201ENST00000272433 PRO2289Q9P1D8 64 aa4.94□□□□□ -1.62
SFXN5-201ENST00000272433 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
SFXN5-201ENST00000272433 MT1HP80294 61 aa4.89□□□□□ -1.63
SFXN5-201ENST00000272433 RNF213Q63HN8 5207 aa4.86□□□□□ -1.63
SFXN5-201ENST00000272433 MUC2Q02817 5179 aa4.85□□□□□ -1.63
SFXN5-201ENST00000272433 MT2AP02795 61 aa4.78□□□□□ -1.64
SFXN5-201ENST00000272433 UBR4Q5T4S7 5183 aa4.76□□□□□ -1.65
SFXN5-201ENST00000272433 MT1FP04733 61 aa4.75□□□□□ -1.65
SFXN5-201ENST00000272433 FAT4Q6V0I7 4981 aa4.7□□□□□ -1.66
SFXN5-201ENST00000272433 LCE2CQ5TA81 110 aa4.67□□□□□ -1.66
SFXN5-201ENST00000272433 FSIP2Q5CZC0 6907 aa4.66□□□□□ -1.66
SFXN5-201ENST00000272433 KRTAP10-12P60413 245 aa4.62□□□□□ -1.67
SFXN5-201ENST00000272433 SPRR2GQ9BYE4 73 aa4.62□□□□□ -1.67
SFXN5-201ENST00000272433 HMCN2Q8NDA2 5059 aa4.61□□□□□ -1.67
SFXN5-201ENST00000272433 KRTAP19-2Q3LHN2 52 aa4.6□□□□□ -1.67
SFXN5-201ENST00000272433 KRTAP19-1Q8IUB9 90 aa4.59□□□□□ -1.68
SFXN5-201ENST00000272433 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
SFXN5-201ENST00000272433 INE1O15225 51 aa4.57□□□□□ -1.68
SFXN5-201ENST00000272433 MUC17Q685J3 4493 aa4.55□□□□□ -1.68
SFXN5-201ENST00000272433 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
SFXN5-201ENST00000272433 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
SFXN5-201ENST00000272433 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
SFXN5-201ENST00000272433 MT1BP07438 61 aa4.39□□□□□ -1.71
SFXN5-201ENST00000272433 LCE2DQ5TA82 110 aaPredicted RBP4.39□□□□□ -1.71
SFXN5-201ENST00000272433 KRTAP19-8Q3LI54 63 aa4.38□□□□□ -1.71
SFXN5-201ENST00000272433 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
SFXN5-201ENST00000272433 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
SFXN5-201ENST00000272433 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
SFXN5-201ENST00000272433 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
SFXN5-201ENST00000272433 KRTAP8-1Q8IUC2 63 aa4.34□□□□□ -1.72
SFXN5-201ENST00000272433 MT1XP80297 61 aa4.33□□□□□ -1.72
SFXN5-201ENST00000272433 LCE2BO14633 110 aa4.31□□□□□ -1.72
SFXN5-201ENST00000272433 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
SFXN5-201ENST00000272433 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
SFXN5-201ENST00000272433 KRTAP4-8A0A0G2JLE6 195 aa4.24□□□□□ -1.73
SFXN5-201ENST00000272433 KRTAP4-8Q9BYQ9 185 aa4.24□□□□□ -1.73
SFXN5-201ENST00000272433 USH2AO75445 5202 aa4.21□□□□□ -1.74
SFXN5-201ENST00000272433 LCE2AQ5TA79 106 aaPredicted RBP4.21□□□□□ -1.74
SFXN5-201ENST00000272433 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
SFXN5-201ENST00000272433 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
SFXN5-201ENST00000272433 KMT2DO14686 5537 aa3.98□□□□□ -1.77
SFXN5-201ENST00000272433 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
SFXN5-201ENST00000272433 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
SFXN5-201ENST00000272433 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
SFXN5-201ENST00000272433 DSTQ03001 7570 aaKnown RBP3.92□□□□□ -1.78
SFXN5-201ENST00000272433 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
SFXN5-201ENST00000272433 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
SFXN5-201ENST00000272433 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
SFXN5-201ENST00000272433 SPRR2EP22531 72 aa3.85□□□□□ -1.79
SFXN5-201ENST00000272433 SPRR2BP35325 72 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms