RNA–Protein interactions for RNA: ENST00000269141.7

CDH2-201, Transcript of cadherin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH2, Length 4,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-201ENST00000269141 KRTAP4-5Q9BYR2 181 aa5.84□□□□□ -1.47
CDH2-201ENST00000269141 DYNC1H1Q14204 4646 aaKnown RBP5.84□□□□□ -1.48
CDH2-201ENST00000269141 R4GN34 69 aa5.83□□□□□ -1.48
CDH2-201ENST00000269141 DNAH2Q9P225 4427 aa5.83□□□□□ -1.48
CDH2-201ENST00000269141 KIAA1109Q2LD37 5005 aa5.82□□□□□ -1.48
CDH2-201ENST00000269141 HYDINQ4G0P3 5121 aa5.8□□□□□ -1.48
CDH2-201ENST00000269141 DNAH8Q96JB1 4490 aa5.8□□□□□ -1.48
CDH2-201ENST00000269141 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
CDH2-201ENST00000269141 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
CDH2-201ENST00000269141 DNAH6Q9C0G6 4158 aa5.77□□□□□ -1.49
CDH2-201ENST00000269141 RYR1P21817 5038 aa5.74□□□□□ -1.49
CDH2-201ENST00000269141 HECTD4Q9Y4D8 3996 aa5.74□□□□□ -1.49
CDH2-201ENST00000269141 KMT2CQ8NEZ4 4911 aaKnown RBP5.73□□□□□ -1.49
CDH2-201ENST00000269141 RYR3Q15413 4870 aa5.72□□□□□ -1.49
CDH2-201ENST00000269141 M0QZ58 72 aa5.71□□□□□ -1.5
CDH2-201ENST00000269141 MT1HL1P0DM35 61 aa5.71□□□□□ -1.5
CDH2-201ENST00000269141 SACSQ9NZJ4 4579 aa5.7□□□□□ -1.5
CDH2-201ENST00000269141 FRAS1Q86XX4 4008 aa5.69□□□□□ -1.5
CDH2-201ENST00000269141 PKHD1P08F94 4074 aa5.69□□□□□ -1.5
CDH2-201ENST00000269141 MYCBP2O75592 4640 aa5.68□□□□□ -1.5
CDH2-201ENST00000269141 VPS13BQ7Z7G8 4022 aa5.66□□□□□ -1.5
CDH2-201ENST00000269141 APOBP04114 4563 aaKnown RBP5.63□□□□□ -1.51
CDH2-201ENST00000269141 LRP1Q07954 4544 aaKnown RBP5.63□□□□□ -1.51
CDH2-201ENST00000269141 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
CDH2-201ENST00000269141 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
CDH2-201ENST00000269141 RYR2Q92736 4967 aa5.6□□□□□ -1.51
CDH2-201ENST00000269141 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
CDH2-201ENST00000269141 FAT2Q9NYQ8 4349 aa5.58□□□□□ -1.52
CDH2-201ENST00000269141 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
CDH2-201ENST00000269141 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
CDH2-201ENST00000269141 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
CDH2-201ENST00000269141 PKD1P98161 4303 aa5.52□□□□□ -1.53
CDH2-201ENST00000269141 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
CDH2-201ENST00000269141 KRTAP12-1P59990 96 aa5.44□□□□□ -1.54
CDH2-201ENST00000269141 HERC2O95714 4834 aa5.41□□□□□ -1.54
CDH2-201ENST00000269141 EPPK1P58107 5090 aaKnown RBP5.41□□□□□ -1.54
CDH2-201ENST00000269141 INE1O15225 51 aa5.38□□□□□ -1.55
CDH2-201ENST00000269141 KRTAP10-6P60371 365 aaPredicted RBP5.35□□□□□ -1.55
CDH2-201ENST00000269141 HSPG2P98160 4391 aa5.34□□□□□ -1.55
CDH2-201ENST00000269141 TNP1P09430 55 aa5.34□□□□□ -1.56
CDH2-201ENST00000269141 LRP2P98164 4655 aa5.33□□□□□ -1.56
CDH2-201ENST00000269141 KRTAP10-10P60014 251 aa5.33□□□□□ -1.56
CDH2-201ENST00000269141 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
CDH2-201ENST00000269141 KRTAP3-3Q9BYR6 98 aa5.24□□□□□ -1.57
CDH2-201ENST00000269141 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.58
CDH2-201ENST00000269141 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
CDH2-201ENST00000269141 BIRC6Q9NR09 4857 aa5.19□□□□□ -1.58
CDH2-201ENST00000269141 LPAP08519 4548 aa5.17□□□□□ -1.58
CDH2-201ENST00000269141 KRTAP3-2Q9BYR7 98 aa5.14□□□□□ -1.59
CDH2-201ENST00000269141 PKHD1L1Q86WI1 4243 aa5.14□□□□□ -1.59
CDH2-201ENST00000269141 TNXBP22105 4242 aa5.1□□□□□ -1.59
CDH2-201ENST00000269141 HERC1Q15751 4861 aa5.06□□□□□ -1.6
CDH2-201ENST00000269141 LORP23490 312 aaPredicted RBP5.06□□□□□ -1.6
CDH2-201ENST00000269141 PCLOQ9Y6V0 5065 aa5.05□□□□□ -1.6
CDH2-201ENST00000269141 MUC2Q02817 5179 aa4.98□□□□□ -1.61
CDH2-201ENST00000269141 RNF213Q63HN8 5207 aa4.97□□□□□ -1.61
CDH2-201ENST00000269141 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
CDH2-201ENST00000269141 MT1HP80294 61 aa4.86□□□□□ -1.63
CDH2-201ENST00000269141 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
CDH2-201ENST00000269141 FSIP2Q5CZC0 6907 aa4.75□□□□□ -1.65
CDH2-201ENST00000269141 MT2AP02795 61 aa4.74□□□□□ -1.65
CDH2-201ENST00000269141 MT1FP04733 61 aa4.72□□□□□ -1.65
CDH2-201ENST00000269141 HMCN2Q8NDA2 5059 aa4.7□□□□□ -1.66
CDH2-201ENST00000269141 LCE2CQ5TA81 110 aa4.65□□□□□ -1.66
CDH2-201ENST00000269141 KRTAP19-2Q3LHN2 52 aa4.63□□□□□ -1.67
CDH2-201ENST00000269141 MUC17Q685J3 4493 aa4.58□□□□□ -1.68
CDH2-201ENST00000269141 SPRR2GQ9BYE4 73 aa4.56□□□□□ -1.68
CDH2-201ENST00000269141 KRTAP19-1Q8IUB9 90 aa4.55□□□□□ -1.68
CDH2-201ENST00000269141 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
CDH2-201ENST00000269141 FLGP20930 4061 aaPredicted RBP4.53□□□□□ -1.68
CDH2-201ENST00000269141 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
CDH2-201ENST00000269141 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
CDH2-201ENST00000269141 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
CDH2-201ENST00000269141 KRTAP12-3P60328 96 aa4.4□□□□□ -1.7
CDH2-201ENST00000269141 MT1BP07438 61 aa4.36□□□□□ -1.71
CDH2-201ENST00000269141 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
CDH2-201ENST00000269141 USH2AO75445 5202 aa4.33□□□□□ -1.72
CDH2-201ENST00000269141 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
CDH2-201ENST00000269141 CRCT1Q9UGL9 99 aa4.31□□□□□ -1.72
CDH2-201ENST00000269141 KRTAP10-7P60409 375 aaPredicted RBP4.3□□□□□ -1.72
CDH2-201ENST00000269141 LCE2BO14633 110 aa4.3□□□□□ -1.72
CDH2-201ENST00000269141 MT1XP80297 61 aa4.29□□□□□ -1.72
CDH2-201ENST00000269141 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
CDH2-201ENST00000269141 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
CDH2-201ENST00000269141 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
CDH2-201ENST00000269141 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
CDH2-201ENST00000269141 LCE2AQ5TA79 106 aaPredicted RBP4.22□□□□□ -1.73
CDH2-201ENST00000269141 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
CDH2-201ENST00000269141 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
CDH2-201ENST00000269141 KMT2DO14686 5537 aa4.07□□□□□ -1.76
CDH2-201ENST00000269141 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
CDH2-201ENST00000269141 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
CDH2-201ENST00000269141 KRTAP12-4P60329 112 aa4□□□□□ -1.77
CDH2-201ENST00000269141 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
CDH2-201ENST00000269141 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
CDH2-201ENST00000269141 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
CDH2-201ENST00000269141 KRTAP4-7Q9BYR0 210 aa3.92□□□□□ -1.78
CDH2-201ENST00000269141 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
CDH2-201ENST00000269141 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
CDH2-201ENST00000269141 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms