RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 CSAG1Q6PB30 78 aa10.1□□□□□ -0.79
CPNE7-201ENST00000268720 RYR1P21817 5038 aa10.09□□□□□ -0.79
CPNE7-201ENST00000268720 KRTAP10-8P60410 259 aa10.08□□□□□ -0.8
CPNE7-201ENST00000268720 LINC01554Q52M75 96 aa10.03□□□□□ -0.8
CPNE7-201ENST00000268720 A0A1B0GU33 70 aa10.02□□□□□ -0.81
CPNE7-201ENST00000268720 H1FX-AS1Q4G0G2 97 aa9.96□□□□□ -0.82
CPNE7-201ENST00000268720 CRIPTQ9P021 101 aa9.96□□□□□ -0.82
CPNE7-201ENST00000268720 LRP2P98164 4655 aa9.94□□□□□ -0.82
CPNE7-201ENST00000268720 EPPK1P58107 5090 aaKnown RBP9.91□□□□□ -0.82
CPNE7-201ENST00000268720 COX6B2Q6YFQ2 88 aa9.89□□□□□ -0.83
CPNE7-201ENST00000268720 ABCA13Q86UQ4 5058 aa9.88□□□□□ -0.83
CPNE7-201ENST00000268720 XP32Q5T750 250 aa9.86□□□□□ -0.83
CPNE7-201ENST00000268720 MT1HL1P0DM35 61 aa9.84□□□□□ -0.83
CPNE7-201ENST00000268720 RPL37P61927 97 aaKnown RBP9.84□□□□□ -0.83
CPNE7-201ENST00000268720 A0A0D9SG42 100 aa9.82□□□□□ -0.84
CPNE7-201ENST00000268720 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
CPNE7-201ENST00000268720 KRTAP13-4Q3LI77 160 aa9.73□□□□□ -0.85
CPNE7-201ENST00000268720 KRTAP25-1Q3LHN0 102 aa9.72□□□□□ -0.85
CPNE7-201ENST00000268720 KRTAP10-6P60371 365 aaPredicted RBP9.68□□□□□ -0.86
CPNE7-201ENST00000268720 K7ERS5 55 aa9.65□□□□□ -0.87
CPNE7-201ENST00000268720 P0C880 135 aa9.64□□□□□ -0.87
CPNE7-201ENST00000268720 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
CPNE7-201ENST00000268720 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
CPNE7-201ENST00000268720 S4R3F8 94 aa9.59□□□□□ -0.87
CPNE7-201ENST00000268720 MUC2Q02817 5179 aa9.54□□□□□ -0.88
CPNE7-201ENST00000268720 ROMO1P60602 79 aa9.5□□□□□ -0.89
CPNE7-201ENST00000268720 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
CPNE7-201ENST00000268720 C10orf95Q9H7T3 257 aa9.45□□□□□ -0.9
CPNE7-201ENST00000268720 SPINT4Q6UDR6 99 aa9.38□□□□□ -0.91
CPNE7-201ENST00000268720 H3BS24 57 aa9.38□□□□□ -0.91
CPNE7-201ENST00000268720 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
CPNE7-201ENST00000268720 HERC2O95714 4834 aa9.33□□□□□ -0.92
CPNE7-201ENST00000268720 MUC17Q685J3 4493 aa9.24□□□□□ -0.93
CPNE7-201ENST00000268720 KRTAP12-1P59990 96 aa9.23□□□□□ -0.93
CPNE7-201ENST00000268720 KRTAP4-1Q9BYQ7 146 aa9.17□□□□□ -0.94
CPNE7-201ENST00000268720 J3QL48 77 aa9.17□□□□□ -0.94
CPNE7-201ENST00000268720 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
CPNE7-201ENST00000268720 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
CPNE7-201ENST00000268720 HERC1Q15751 4861 aa9.09□□□□□ -0.96
CPNE7-201ENST00000268720 M0QZ58 72 aa9.08□□□□□ -0.96
CPNE7-201ENST00000268720 BIRC6Q9NR09 4857 aa9.02□□□□□ -0.97
CPNE7-201ENST00000268720 FAT4Q6V0I7 4981 aa9.02□□□□□ -0.97
CPNE7-201ENST00000268720 R4GN34 69 aa8.98□□□□□ -0.97
CPNE7-201ENST00000268720 PCLOQ9Y6V0 5065 aa8.95□□□□□ -0.98
CPNE7-201ENST00000268720 KRTAP19-2Q3LHN2 52 aa8.95□□□□□ -0.98
CPNE7-201ENST00000268720 KRTAP15-1Q3LI76 137 aa8.9□□□□□ -0.98
CPNE7-201ENST00000268720 RNF213Q63HN8 5207 aa8.87□□□□□ -0.99
CPNE7-201ENST00000268720 NDUFAF8A1L188 74 aa8.83□□□□□ -1
CPNE7-201ENST00000268720 HMCN2Q8NDA2 5059 aa8.78□□□□□ -1
CPNE7-201ENST00000268720 FLGP20930 4061 aaPredicted RBP8.71□□□□□ -1.01
CPNE7-201ENST00000268720 UBR4Q5T4S7 5183 aa8.65□□□□□ -1.02
CPNE7-201ENST00000268720 CAMK2N1Q7Z7J9 78 aa8.58□□□□□ -1.04
CPNE7-201ENST00000268720 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
CPNE7-201ENST00000268720 PLAC4Q8WY50 150 aa8.48□□□□□ -1.05
CPNE7-201ENST00000268720 M0R2T5 61 aa8.27□□□□□ -1.09
CPNE7-201ENST00000268720 PP632Q6XCG6 107 aa8.25□□□□□ -1.09
CPNE7-201ENST00000268720 MT1HP80294 61 aa8.25□□□□□ -1.09
CPNE7-201ENST00000268720 KRTAP19-1Q8IUB9 90 aa8.17□□□□□ -1.1
CPNE7-201ENST00000268720 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.11
CPNE7-201ENST00000268720 TNP1P09430 55 aa8.14□□□□□ -1.11
CPNE7-201ENST00000268720 MT1FP04733 61 aa8.09□□□□□ -1.11
CPNE7-201ENST00000268720 MT2AP02795 61 aa8.07□□□□□ -1.12
CPNE7-201ENST00000268720 LUZP6Q538Z0 58 aa8.07□□□□□ -1.12
CPNE7-201ENST00000268720 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
CPNE7-201ENST00000268720 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
CPNE7-201ENST00000268720 USH2AO75445 5202 aa8□□□□□ -1.13
CPNE7-201ENST00000268720 KRTAP23-1A1A580 65 aa7.88□□□□□ -1.15
CPNE7-201ENST00000268720 LCE3AQ5TA76 89 aa7.86□□□□□ -1.15
CPNE7-201ENST00000268720 KMT2DO14686 5537 aa7.85□□□□□ -1.15
CPNE7-201ENST00000268720 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
CPNE7-201ENST00000268720 MT1BP07438 61 aa7.77□□□□□ -1.16
CPNE7-201ENST00000268720 SPRR5A0A1B0GTR4 108 aa7.76□□□□□ -1.17
CPNE7-201ENST00000268720 KRTAP9-3Q9BYQ3 159 aa7.7□□□□□ -1.18
CPNE7-201ENST00000268720 A0A0A0MQY5 61 aa7.69□□□□□ -1.18
CPNE7-201ENST00000268720 KRTAP10-5P60370 271 aa7.68□□□□□ -1.18
CPNE7-201ENST00000268720 MT1XP80297 61 aa7.67□□□□□ -1.18
CPNE7-201ENST00000268720 KRTAP10-7P60409 375 aaPredicted RBP7.55□□□□□ -1.2
CPNE7-201ENST00000268720 FSIP2Q5CZC0 6907 aa7.48□□□□□ -1.21
CPNE7-201ENST00000268720 LCE2BO14633 110 aa7.46□□□□□ -1.22
CPNE7-201ENST00000268720 KRTAP8-1Q8IUC2 63 aa7.46□□□□□ -1.22
CPNE7-201ENST00000268720 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
CPNE7-201ENST00000268720 LCE2AQ5TA79 106 aaPredicted RBP7.41□□□□□ -1.22
CPNE7-201ENST00000268720 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
CPNE7-201ENST00000268720 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
CPNE7-201ENST00000268720 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
CPNE7-201ENST00000268720 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
CPNE7-201ENST00000268720 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
CPNE7-201ENST00000268720 SSPOA2VEC9 5147 aa7.02□□□□□ -1.29
CPNE7-201ENST00000268720 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
CPNE7-201ENST00000268720 LCE3CQ5T5A8 94 aa6.92□□□□□ -1.3
CPNE7-201ENST00000268720 KRTAP9-6A8MVA2 160 aa6.88□□□□□ -1.31
CPNE7-201ENST00000268720 INE1O15225 51 aa6.86□□□□□ -1.31
CPNE7-201ENST00000268720 MUC12Q9UKN1 5478 aa6.85□□□□□ -1.31
CPNE7-201ENST00000268720 KRTAP19-7Q3SYF9 63 aa6.85□□□□□ -1.31
CPNE7-201ENST00000268720 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
CPNE7-201ENST00000268720 DSTQ03001 7570 aaKnown RBP6.79□□□□□ -1.32
CPNE7-201ENST00000268720 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
CPNE7-201ENST00000268720 MT1EP04732 61 aa6.63□□□□□ -1.35
CPNE7-201ENST00000268720 MT1LQ93083 61 aa6.61□□□□□ -1.35
CPNE7-201ENST00000268720 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms