RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 RYR1P21817 5038 aa5.57□□□□□ -1.52
LSG1-201ENST00000265245 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
LSG1-201ENST00000265245 SPATA8Q6RVD6 105 aa5.56□□□□□ -1.52
LSG1-201ENST00000265245 BIRC6Q9NR09 4857 aa5.52□□□□□ -1.53
LSG1-201ENST00000265245 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
LSG1-201ENST00000265245 KRTAP3-3Q9BYR6 98 aa5.51□□□□□ -1.53
LSG1-201ENST00000265245 KRTAP3-2Q9BYR7 98 aa5.51□□□□□ -1.53
LSG1-201ENST00000265245 Q5VSD8 79 aa5.49□□□□□ -1.53
LSG1-201ENST00000265245 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
LSG1-201ENST00000265245 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
LSG1-201ENST00000265245 KRTAP10-8P60410 259 aa5.47□□□□□ -1.53
LSG1-201ENST00000265245 HERC2O95714 4834 aa5.46□□□□□ -1.53
LSG1-201ENST00000265245 COX6B2Q6YFQ2 88 aa5.45□□□□□ -1.54
LSG1-201ENST00000265245 KIAA1109Q2LD37 5005 aa5.45□□□□□ -1.54
LSG1-201ENST00000265245 C10orf95Q9H7T3 257 aa5.44□□□□□ -1.54
LSG1-201ENST00000265245 LRP1Q07954 4544 aaKnown RBP5.43□□□□□ -1.54
LSG1-201ENST00000265245 LUZP6Q538Z0 58 aa5.41□□□□□ -1.54
LSG1-201ENST00000265245 FAT3Q8TDW7 4589 aa5.41□□□□□ -1.54
LSG1-201ENST00000265245 TNXBP22105 4242 aa5.4□□□□□ -1.54
LSG1-201ENST00000265245 RPL37P61927 97 aaKnown RBP5.4□□□□□ -1.55
LSG1-201ENST00000265245 A0A1B0GU33 70 aa5.38□□□□□ -1.55
LSG1-201ENST00000265245 XP32Q5T750 250 aa5.37□□□□□ -1.55
LSG1-201ENST00000265245 H0YAA0 97 aa5.35□□□□□ -1.55
LSG1-201ENST00000265245 H1FX-AS1Q4G0G2 97 aa5.35□□□□□ -1.55
LSG1-201ENST00000265245 A0A0D9SG42 100 aa5.34□□□□□ -1.55
LSG1-201ENST00000265245 MYCBP2O75592 4640 aa5.31□□□□□ -1.56
LSG1-201ENST00000265245 ABCA13Q86UQ4 5058 aa5.3□□□□□ -1.56
LSG1-201ENST00000265245 MT1HL1P0DM35 61 aa5.3□□□□□ -1.56
LSG1-201ENST00000265245 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
LSG1-201ENST00000265245 S4R3F8 94 aa5.27□□□□□ -1.57
LSG1-201ENST00000265245 K7ERS5 55 aa5.25□□□□□ -1.57
LSG1-201ENST00000265245 TPRXLQ17RH7 258 aa5.24□□□□□ -1.57
LSG1-201ENST00000265245 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
LSG1-201ENST00000265245 PCLOQ9Y6V0 5065 aa5.19□□□□□ -1.58
LSG1-201ENST00000265245 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
LSG1-201ENST00000265245 KRTAP13-4Q3LI77 160 aa5.12□□□□□ -1.59
LSG1-201ENST00000265245 LRP2P98164 4655 aa5.11□□□□□ -1.59
LSG1-201ENST00000265245 LPAP08519 4548 aa5.08□□□□□ -1.6
LSG1-201ENST00000265245 SEC61BP60468 96 aaKnown RBP5.04□□□□□ -1.6
LSG1-201ENST00000265245 M0QZ58 72 aa5□□□□□ -1.61
LSG1-201ENST00000265245 HMCN2Q8NDA2 5059 aa4.98□□□□□ -1.61
LSG1-201ENST00000265245 HERC1Q15751 4861 aa4.98□□□□□ -1.61
LSG1-201ENST00000265245 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
LSG1-201ENST00000265245 KRTAP12-2P59991 146 aa4.97□□□□□ -1.61
LSG1-201ENST00000265245 KRTAP12-1P59990 96 aa4.95□□□□□ -1.62
LSG1-201ENST00000265245 R4GN34 69 aa4.91□□□□□ -1.62
LSG1-201ENST00000265245 LCE2BO14633 110 aa4.9□□□□□ -1.62
LSG1-201ENST00000265245 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
LSG1-201ENST00000265245 LCE2CQ5TA81 110 aa4.85□□□□□ -1.63
LSG1-201ENST00000265245 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
LSG1-201ENST00000265245 KRTAP19-2Q3LHN2 52 aa4.79□□□□□ -1.64
LSG1-201ENST00000265245 LORP23490 312 aaPredicted RBP4.77□□□□□ -1.65
LSG1-201ENST00000265245 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
LSG1-201ENST00000265245 MUC2Q02817 5179 aa4.71□□□□□ -1.66
LSG1-201ENST00000265245 UBR4Q5T4S7 5183 aa4.66□□□□□ -1.66
LSG1-201ENST00000265245 FLGP20930 4061 aaPredicted RBP4.66□□□□□ -1.66
LSG1-201ENST00000265245 CAMK2N1Q7Z7J9 78 aa4.66□□□□□ -1.66
LSG1-201ENST00000265245 RNF213Q63HN8 5207 aa4.64□□□□□ -1.67
LSG1-201ENST00000265245 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
LSG1-201ENST00000265245 M0R2T5 61 aa4.51□□□□□ -1.69
LSG1-201ENST00000265245 FAT4Q6V0I7 4981 aa4.5□□□□□ -1.69
LSG1-201ENST00000265245 TNP1P09430 55 aa4.47□□□□□ -1.69
LSG1-201ENST00000265245 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
LSG1-201ENST00000265245 MT1HP80294 61 aa4.44□□□□□ -1.7
LSG1-201ENST00000265245 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
LSG1-201ENST00000265245 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
LSG1-201ENST00000265245 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
LSG1-201ENST00000265245 MT2AP02795 61 aa4.35□□□□□ -1.71
LSG1-201ENST00000265245 MT1FP04733 61 aa4.35□□□□□ -1.71
LSG1-201ENST00000265245 PRO2289Q9P1D8 64 aa4.34□□□□□ -1.71
LSG1-201ENST00000265245 KRTAP9-8Q9BYQ0 159 aa4.32□□□□□ -1.72
LSG1-201ENST00000265245 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
LSG1-201ENST00000265245 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
LSG1-201ENST00000265245 MT1BP07438 61 aa4.19□□□□□ -1.74
LSG1-201ENST00000265245 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
LSG1-201ENST00000265245 MT1XP80297 61 aa4.14□□□□□ -1.75
LSG1-201ENST00000265245 KRTAP9-3Q9BYQ3 159 aa4.14□□□□□ -1.75
LSG1-201ENST00000265245 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
LSG1-201ENST00000265245 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
LSG1-201ENST00000265245 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
LSG1-201ENST00000265245 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
LSG1-201ENST00000265245 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
LSG1-201ENST00000265245 INE1O15225 51 aa4□□□□□ -1.77
LSG1-201ENST00000265245 USH2AO75445 5202 aa3.91□□□□□ -1.78
LSG1-201ENST00000265245 KRTAP9-2Q9BYQ4 174 aa3.89□□□□□ -1.79
LSG1-201ENST00000265245 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
LSG1-201ENST00000265245 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
LSG1-201ENST00000265245 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
LSG1-201ENST00000265245 KRTAP4-8A0A0G2JLE6 195 aa3.77□□□□□ -1.81
LSG1-201ENST00000265245 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
LSG1-201ENST00000265245 KMT2DO14686 5537 aa3.77□□□□□ -1.81
LSG1-201ENST00000265245 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
LSG1-201ENST00000265245 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
LSG1-201ENST00000265245 CRCT1Q9UGL9 99 aa3.71□□□□□ -1.82
LSG1-201ENST00000265245 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
LSG1-201ENST00000265245 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
LSG1-201ENST00000265245 KRTAP9-6A0A140TA67 174 aa3.64□□□□□ -1.83
LSG1-201ENST00000265245 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
LSG1-201ENST00000265245 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
LSG1-201ENST00000265245 MT1EP04732 61 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms