RNA–Protein interactions for RNA: ENST00000264718.7

GPN1-201, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-201ENST00000264718 KRTAP3-2Q9BYR7 98 aa7.57□□□□□ -1.2
GPN1-201ENST00000264718 FAT2Q9NYQ8 4349 aa7.57□□□□□ -1.2
GPN1-201ENST00000264718 LRP1BQ9NZR2 4599 aa7.55□□□□□ -1.2
GPN1-201ENST00000264718 KRTAP3-3Q9BYR6 98 aa7.54□□□□□ -1.2
GPN1-201ENST00000264718 PKD1P98161 4303 aa7.5□□□□□ -1.21
GPN1-201ENST00000264718 PKHD1P08F94 4074 aa7.49□□□□□ -1.21
GPN1-201ENST00000264718 KRTAP12-2P59991 146 aa7.49□□□□□ -1.21
GPN1-201ENST00000264718 VPS13BQ7Z7G8 4022 aa7.48□□□□□ -1.21
GPN1-201ENST00000264718 XP32Q5T750 250 aa7.47□□□□□ -1.21
GPN1-201ENST00000264718 A0A1B0GVY2 172 aa7.45□□□□□ -1.22
GPN1-201ENST00000264718 KRTAP12-1P59990 96 aa7.42□□□□□ -1.22
GPN1-201ENST00000264718 LUZP6Q538Z0 58 aa7.39□□□□□ -1.23
GPN1-201ENST00000264718 EPPK1P58107 5090 aaKnown RBP7.39□□□□□ -1.23
GPN1-201ENST00000264718 DMBT1Q9UGM3 2413 aaPredicted RBP7.38□□□□□ -1.23
GPN1-201ENST00000264718 DYNC1H1Q14204 4646 aaKnown RBP7.34□□□□□ -1.23
GPN1-201ENST00000264718 M0QZ58 72 aa7.3□□□□□ -1.24
GPN1-201ENST00000264718 PKHD1L1Q86WI1 4243 aa7.28□□□□□ -1.24
GPN1-201ENST00000264718 APOBP04114 4563 aaKnown RBP7.25□□□□□ -1.25
GPN1-201ENST00000264718 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
GPN1-201ENST00000264718 KIAA1109Q2LD37 5005 aa7.23□□□□□ -1.25
GPN1-201ENST00000264718 KRTAP10-8P60410 259 aa7.21□□□□□ -1.26
GPN1-201ENST00000264718 SMR3BP02814 79 aaPredicted RBP7.19□□□□□ -1.26
GPN1-201ENST00000264718 HSPG2P98160 4391 aa7.19□□□□□ -1.26
GPN1-201ENST00000264718 KRTAP17-1Q9BYP8 105 aa7.18□□□□□ -1.26
GPN1-201ENST00000264718 FAT1Q14517 4588 aa7.17□□□□□ -1.26
GPN1-201ENST00000264718 BIRC6Q9NR09 4857 aa7.15□□□□□ -1.27
GPN1-201ENST00000264718 RYR1P21817 5038 aa7.14□□□□□ -1.27
GPN1-201ENST00000264718 KRTAP10-4P60372 401 aaPredicted RBP7.1□□□□□ -1.27
GPN1-201ENST00000264718 Q5VSD8 79 aa7.06□□□□□ -1.28
GPN1-201ENST00000264718 KRTAP4-5Q9BYR2 181 aa7.04□□□□□ -1.28
GPN1-201ENST00000264718 LRP1Q07954 4544 aaKnown RBP7.03□□□□□ -1.28
GPN1-201ENST00000264718 HERC2O95714 4834 aa7.01□□□□□ -1.29
GPN1-201ENST00000264718 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
GPN1-201ENST00000264718 FAT3Q8TDW7 4589 aa6.97□□□□□ -1.29
GPN1-201ENST00000264718 R4GN34 69 aa6.95□□□□□ -1.3
GPN1-201ENST00000264718 TNXBP22105 4242 aa6.95□□□□□ -1.3
GPN1-201ENST00000264718 MYCBP2O75592 4640 aa6.93□□□□□ -1.3
GPN1-201ENST00000264718 ABCA13Q86UQ4 5058 aa6.92□□□□□ -1.3
GPN1-201ENST00000264718 PCLOQ9Y6V0 5065 aa6.85□□□□□ -1.31
GPN1-201ENST00000264718 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
GPN1-201ENST00000264718 MT1HL1P0DM35 61 aa6.75□□□□□ -1.33
GPN1-201ENST00000264718 J3QL48 77 aa6.68□□□□□ -1.34
GPN1-201ENST00000264718 CAMK2N1Q7Z7J9 78 aa6.67□□□□□ -1.34
GPN1-201ENST00000264718 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
GPN1-201ENST00000264718 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
GPN1-201ENST00000264718 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
GPN1-201ENST00000264718 HERC1Q15751 4861 aa6.62□□□□□ -1.35
GPN1-201ENST00000264718 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
GPN1-201ENST00000264718 LPAP08519 4548 aa6.55□□□□□ -1.36
GPN1-201ENST00000264718 TNP1P09430 55 aa6.52□□□□□ -1.37
GPN1-201ENST00000264718 LRP2P98164 4655 aa6.44□□□□□ -1.38
GPN1-201ENST00000264718 HMCN2Q8NDA2 5059 aa6.41□□□□□ -1.38
GPN1-201ENST00000264718 INE1O15225 51 aa6.4□□□□□ -1.38
GPN1-201ENST00000264718 MUC17Q685J3 4493 aa6.24□□□□□ -1.41
GPN1-201ENST00000264718 UBR4Q5T4S7 5183 aa6.22□□□□□ -1.41
GPN1-201ENST00000264718 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
GPN1-201ENST00000264718 KRTAP4-1Q9BYQ7 146 aa6.15□□□□□ -1.42
GPN1-201ENST00000264718 MUC2Q02817 5179 aa6.12□□□□□ -1.43
GPN1-201ENST00000264718 RNF213Q63HN8 5207 aa6.11□□□□□ -1.43
GPN1-201ENST00000264718 FLGP20930 4061 aaPredicted RBP6.07□□□□□ -1.44
GPN1-201ENST00000264718 LCE3AQ5TA76 89 aa6.03□□□□□ -1.44
GPN1-201ENST00000264718 LCE2DQ5TA82 110 aaPredicted RBP5.93□□□□□ -1.46
GPN1-201ENST00000264718 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
GPN1-201ENST00000264718 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
GPN1-201ENST00000264718 FAT4Q6V0I7 4981 aa5.88□□□□□ -1.47
GPN1-201ENST00000264718 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
GPN1-201ENST00000264718 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
GPN1-201ENST00000264718 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
GPN1-201ENST00000264718 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
GPN1-201ENST00000264718 MT1HP80294 61 aa5.71□□□□□ -1.5
GPN1-201ENST00000264718 LCE2AQ5TA79 106 aaPredicted RBP5.68□□□□□ -1.5
GPN1-201ENST00000264718 KRTAP10-10P60014 251 aa5.62□□□□□ -1.51
GPN1-201ENST00000264718 M0R2T5 61 aa5.62□□□□□ -1.51
GPN1-201ENST00000264718 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
GPN1-201ENST00000264718 KRTAP19-8Q3LI54 63 aa5.55□□□□□ -1.52
GPN1-201ENST00000264718 MT1XP80297 61 aa5.51□□□□□ -1.53
GPN1-201ENST00000264718 KRTAP9-8Q9BYQ0 159 aa5.46□□□□□ -1.54
GPN1-201ENST00000264718 MT1FP04733 61 aa5.45□□□□□ -1.54
GPN1-201ENST00000264718 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
GPN1-201ENST00000264718 MT2AP02795 61 aa5.44□□□□□ -1.54
GPN1-201ENST00000264718 MT1BP07438 61 aa5.41□□□□□ -1.54
GPN1-201ENST00000264718 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
GPN1-201ENST00000264718 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
GPN1-201ENST00000264718 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
GPN1-201ENST00000264718 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
GPN1-201ENST00000264718 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
GPN1-201ENST00000264718 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
GPN1-201ENST00000264718 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
GPN1-201ENST00000264718 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
GPN1-201ENST00000264718 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
GPN1-201ENST00000264718 LCE2BO14633 110 aa5.19□□□□□ -1.58
GPN1-201ENST00000264718 USH2AO75445 5202 aa5.13□□□□□ -1.59
GPN1-201ENST00000264718 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
GPN1-201ENST00000264718 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
GPN1-201ENST00000264718 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
GPN1-201ENST00000264718 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
GPN1-201ENST00000264718 KRTAP9-6A0A140TA67 174 aa4.9□□□□□ -1.62
GPN1-201ENST00000264718 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
GPN1-201ENST00000264718 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
GPN1-201ENST00000264718 KRTAP4-8A0A0G2JLE6 195 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms