RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 SPRR2GQ9BYE4 73 aa5.47□□□□□ -1.53
TRAF4-202ENST00000262396 KRTAP19-8Q3LI54 63 aa5.45□□□□□ -1.54
TRAF4-202ENST00000262396 CYP4F30PQ9H0H9 118 aa5.43□□□□□ -1.54
TRAF4-202ENST00000262396 CRIPTQ9P021 101 aa5.43□□□□□ -1.54
TRAF4-202ENST00000262396 MUC12Q9UKN1 5478 aa5.43□□□□□ -1.54
TRAF4-202ENST00000262396 TRAV22A0A0B4J277 110 aa5.42□□□□□ -1.54
TRAF4-202ENST00000262396 LOC101927531A0A1B0GV80 90 aa5.42□□□□□ -1.54
TRAF4-202ENST00000262396 MT-ATP8P03928 68 aa5.41□□□□□ -1.54
TRAF4-202ENST00000262396 KRTAP10-5P60370 271 aa5.41□□□□□ -1.54
TRAF4-202ENST00000262396 NDUFC1O43677 76 aa5.4□□□□□ -1.54
TRAF4-202ENST00000262396 A0A087WVE0 104 aa5.39□□□□□ -1.55
TRAF4-202ENST00000262396 SCGB1A1P11684 91 aa5.37□□□□□ -1.55
TRAF4-202ENST00000262396 KRTAP3-3Q9BYR6 98 aa5.37□□□□□ -1.55
TRAF4-202ENST00000262396 UQCRQO14949 82 aa5.36□□□□□ -1.55
TRAF4-202ENST00000262396 KRTAP20-1Q3LI63 56 aa5.36□□□□□ -1.55
TRAF4-202ENST00000262396 ATOX1O00244 68 aa5.34□□□□□ -1.55
TRAF4-202ENST00000262396 H0Y9P7 68 aa5.33□□□□□ -1.56
TRAF4-202ENST00000262396 A8MUN3 132 aa5.3□□□□□ -1.56
TRAF4-202ENST00000262396 MP68P56378 58 aa5.3□□□□□ -1.56
TRAF4-202ENST00000262396 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
TRAF4-202ENST00000262396 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
TRAF4-202ENST00000262396 SMIM20Q8N5G0 67 aa5.29□□□□□ -1.56
TRAF4-202ENST00000262396 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
TRAF4-202ENST00000262396 PLAC4Q8WY50 150 aa5.28□□□□□ -1.56
TRAF4-202ENST00000262396 H0YAA0 97 aa5.27□□□□□ -1.57
TRAF4-202ENST00000262396 KRTAP5-9P26371 169 aa5.27□□□□□ -1.57
TRAF4-202ENST00000262396 OCR1Q9BZK8 76 aa5.27□□□□□ -1.57
TRAF4-202ENST00000262396 KMT2DO14686 5537 aa5.26□□□□□ -1.57
TRAF4-202ENST00000262396 LINC00208Q96KT6 92 aa5.24□□□□□ -1.57
TRAF4-202ENST00000262396 H3BPC8 53 aa5.23□□□□□ -1.57
TRAF4-202ENST00000262396 ANAPC13Q9BS18 74 aa5.23□□□□□ -1.57
TRAF4-202ENST00000262396 R4GN34 69 aa5.22□□□□□ -1.57
TRAF4-202ENST00000262396 C20orf197Q8N268 126 aa5.21□□□□□ -1.58
TRAF4-202ENST00000262396 TRAV7A0A075B6U4 112 aa5.2□□□□□ -1.58
TRAF4-202ENST00000262396 SERP2Q8N6R1 65 aa5.2□□□□□ -1.58
TRAF4-202ENST00000262396 SPRR2FQ96RM1 72 aa5.2□□□□□ -1.58
TRAF4-202ENST00000262396 SPRR2EP22531 72 aa5.17□□□□□ -1.58
TRAF4-202ENST00000262396 SPRR2BP35325 72 aa5.17□□□□□ -1.58
TRAF4-202ENST00000262396 SPRR2AP35326 72 aa5.17□□□□□ -1.58
TRAF4-202ENST00000262396 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
TRAF4-202ENST00000262396 COX7CP15954 63 aa5.16□□□□□ -1.58
TRAF4-202ENST00000262396 PCP4P48539 62 aa5.16□□□□□ -1.58
TRAF4-202ENST00000262396 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
TRAF4-202ENST00000262396 M0QZ58 72 aa5.15□□□□□ -1.59
TRAF4-202ENST00000262396 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
TRAF4-202ENST00000262396 LINC01554Q52M75 96 aa5.14□□□□□ -1.59
TRAF4-202ENST00000262396 MT1XP80297 61 aa5.1□□□□□ -1.59
TRAF4-202ENST00000262396 P0C880 135 aa5.08□□□□□ -1.6
TRAF4-202ENST00000262396 CCDC179H3BU77 68 aa5.04□□□□□ -1.6
TRAF4-202ENST00000262396 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
TRAF4-202ENST00000262396 DMAC1Q96GE9 116 aa5.03□□□□□ -1.6
TRAF4-202ENST00000262396 SNURFQ9Y675 71 aa5.03□□□□□ -1.6
TRAF4-202ENST00000262396 SPRR2DP22532 72 aa5□□□□□ -1.61
TRAF4-202ENST00000262396 SPTSSBQ8NFR3 76 aa5□□□□□ -1.61
TRAF4-202ENST00000262396 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
TRAF4-202ENST00000262396 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
TRAF4-202ENST00000262396 ACYP2P14621 99 aa4.98□□□□□ -1.61
TRAF4-202ENST00000262396 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
TRAF4-202ENST00000262396 SPANXA2-OT1Q8N9U9 137 aa4.96□□□□□ -1.62
TRAF4-202ENST00000262396 KRTAP4-8A0A0G2JLE6 195 aa4.95□□□□□ -1.62
TRAF4-202ENST00000262396 CHKB-CPT1BH3BT56 60 aa4.95□□□□□ -1.62
TRAF4-202ENST00000262396 TMEM258P61165 79 aa4.95□□□□□ -1.62
TRAF4-202ENST00000262396 KRTAP4-8Q9BYQ9 185 aa4.95□□□□□ -1.62
TRAF4-202ENST00000262396 ATP5EP56381 51 aaPredicted RBP4.94□□□□□ -1.62
TRAF4-202ENST00000262396 KRTAP3-2Q9BYR7 98 aa4.94□□□□□ -1.62
TRAF4-202ENST00000262396 H7BZZ5 65 aa4.93□□□□□ -1.62
TRAF4-202ENST00000262396 KRTAP10-7P60409 375 aaPredicted RBP4.89□□□□□ -1.63
TRAF4-202ENST00000262396 CYSTM1Q9H1C7 97 aa4.89□□□□□ -1.63
TRAF4-202ENST00000262396 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
TRAF4-202ENST00000262396 KRTAP10-12P60413 245 aa4.84□□□□□ -1.63
TRAF4-202ENST00000262396 CAMK2N1Q7Z7J9 78 aa4.82□□□□□ -1.64
TRAF4-202ENST00000262396 COA5Q86WW8 74 aa4.8□□□□□ -1.64
TRAF4-202ENST00000262396 SERP1Q9Y6X1 66 aa4.79□□□□□ -1.64
TRAF4-202ENST00000262396 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
TRAF4-202ENST00000262396 SEC61GP60059 68 aa4.71□□□□□ -1.66
TRAF4-202ENST00000262396 SMIM26A0A096LP01 95 aa4.68□□□□□ -1.66
TRAF4-202ENST00000262396 A0A0D9SG42 100 aa4.65□□□□□ -1.67
TRAF4-202ENST00000262396 V9GYY9 64 aa4.65□□□□□ -1.67
TRAF4-202ENST00000262396 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
TRAF4-202ENST00000262396 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
TRAF4-202ENST00000262396 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
TRAF4-202ENST00000262396 GPR98Q8WXG9 6306 aa4.63□□□□□ -1.67
TRAF4-202ENST00000262396 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
TRAF4-202ENST00000262396 A0A1B0GU69 56 aa4.59□□□□□ -1.67
TRAF4-202ENST00000262396 Q1T7F1 81 aa4.58□□□□□ -1.68
TRAF4-202ENST00000262396 PRR15LQ9BU68 103 aa4.58□□□□□ -1.68
TRAF4-202ENST00000262396 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
TRAF4-202ENST00000262396 LINC01558Q9Y6Z2 57 aa4.56□□□□□ -1.68
TRAF4-202ENST00000262396 MT1EP04732 61 aa4.55□□□□□ -1.68
TRAF4-202ENST00000262396 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
TRAF4-202ENST00000262396 A0A1B0GU33 70 aa4.54□□□□□ -1.68
TRAF4-202ENST00000262396 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
TRAF4-202ENST00000262396 SPATA8Q6RVD6 105 aa4.54□□□□□ -1.68
TRAF4-202ENST00000262396 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
TRAF4-202ENST00000262396 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
TRAF4-202ENST00000262396 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
TRAF4-202ENST00000262396 PSPHP1O15172 72 aa4.45□□□□□ -1.7
TRAF4-202ENST00000262396 MT1GP13640 62 aa4.45□□□□□ -1.7
TRAF4-202ENST00000262396 KRTAP12-1P59990 96 aa4.42□□□□□ -1.7
TRAF4-202ENST00000262396 UQCR11O14957 56 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms