RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 KRTAP4-1Q9BYQ7 146 aa6.18□□□□□ -1.42
PFDN1-201ENST00000261813 COX7CP15954 63 aa6.18□□□□□ -1.42
PFDN1-201ENST00000261813 OCR1Q9BZK8 76 aa6.18□□□□□ -1.42
PFDN1-201ENST00000261813 ATP11AUNQ6ZP68 121 aa6.17□□□□□ -1.42
PFDN1-201ENST00000261813 SERP2Q8N6R1 65 aa6.16□□□□□ -1.42
PFDN1-201ENST00000261813 MP68P56378 58 aa6.14□□□□□ -1.43
PFDN1-201ENST00000261813 ZCCHC13Q8WW36 166 aaKnown RBP6.14□□□□□ -1.43
PFDN1-201ENST00000261813 TRAV22A0A0B4J277 110 aa6.12□□□□□ -1.43
PFDN1-201ENST00000261813 H3BPC8 53 aa6.12□□□□□ -1.43
PFDN1-201ENST00000261813 SERP1Q9Y6X1 66 aa6.11□□□□□ -1.43
PFDN1-201ENST00000261813 H0Y9P7 68 aa6.09□□□□□ -1.43
PFDN1-201ENST00000261813 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
PFDN1-201ENST00000261813 BRK1Q8WUW1 75 aa6.08□□□□□ -1.44
PFDN1-201ENST00000261813 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
PFDN1-201ENST00000261813 Q5W150 140 aa6.06□□□□□ -1.44
PFDN1-201ENST00000261813 C1orf64Q8NEQ6 169 aa6.04□□□□□ -1.44
PFDN1-201ENST00000261813 LINC00208Q96KT6 92 aa6.04□□□□□ -1.44
PFDN1-201ENST00000261813 RBM12B-AS1Q9P1G2 102 aa6.03□□□□□ -1.44
PFDN1-201ENST00000261813 C7orf65Q6ZTY9 151 aa6.02□□□□□ -1.45
PFDN1-201ENST00000261813 IGKV2-30P06310 120 aa6.01□□□□□ -1.45
PFDN1-201ENST00000261813 KRTAP19-2Q3LHN2 52 aa6.01□□□□□ -1.45
PFDN1-201ENST00000261813 C20orf197Q8N268 126 aa6.01□□□□□ -1.45
PFDN1-201ENST00000261813 KLKP1Q107X0 134 aa6□□□□□ -1.45
PFDN1-201ENST00000261813 CYSTM1Q9H1C7 97 aa6□□□□□ -1.45
PFDN1-201ENST00000261813 NDUFC1O43677 76 aa5.99□□□□□ -1.45
PFDN1-201ENST00000261813 CYP4F30PQ9H0H9 118 aa5.99□□□□□ -1.45
PFDN1-201ENST00000261813 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
PFDN1-201ENST00000261813 IGKV2D-30A0A075B6S6 120 aa5.98□□□□□ -1.45
PFDN1-201ENST00000261813 SPINK7P58062 85 aa5.98□□□□□ -1.45
PFDN1-201ENST00000261813 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
PFDN1-201ENST00000261813 SNURFQ9Y675 71 aa5.95□□□□□ -1.46
PFDN1-201ENST00000261813 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
PFDN1-201ENST00000261813 ATP5EP56381 51 aaPredicted RBP5.93□□□□□ -1.46
PFDN1-201ENST00000261813 LCE1AQ5T7P2 110 aa5.93□□□□□ -1.46
PFDN1-201ENST00000261813 HRES1P13985 223 aa5.89□□□□□ -1.47
PFDN1-201ENST00000261813 COX6B2Q6YFQ2 88 aa5.88□□□□□ -1.47
PFDN1-201ENST00000261813 SPANXA2-OT1Q8N9U9 137 aa5.88□□□□□ -1.47
PFDN1-201ENST00000261813 MT1HP80294 61 aa5.87□□□□□ -1.47
PFDN1-201ENST00000261813 MPLKIPQ8TAP9 179 aa5.86□□□□□ -1.47
PFDN1-201ENST00000261813 H7BZZ5 65 aa5.85□□□□□ -1.47
PFDN1-201ENST00000261813 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
PFDN1-201ENST00000261813 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.47
PFDN1-201ENST00000261813 A8MUN3 132 aa5.83□□□□□ -1.48
PFDN1-201ENST00000261813 LCA10Q71F78 164 aa5.8□□□□□ -1.48
PFDN1-201ENST00000261813 ACYP2P14621 99 aa5.78□□□□□ -1.48
PFDN1-201ENST00000261813 DMAC1Q96GE9 116 aa5.78□□□□□ -1.48
PFDN1-201ENST00000261813 M0R2T5 61 aa5.74□□□□□ -1.49
PFDN1-201ENST00000261813 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
PFDN1-201ENST00000261813 KRTAP10-6P60371 365 aaPredicted RBP5.71□□□□□ -1.5
PFDN1-201ENST00000261813 Q1T7F1 81 aa5.7□□□□□ -1.5
PFDN1-201ENST00000261813 A6NN06 94 aa5.67□□□□□ -1.5
PFDN1-201ENST00000261813 CHKB-CPT1BH3BT56 60 aa5.67□□□□□ -1.5
PFDN1-201ENST00000261813 SPTSSBQ8NFR3 76 aa5.66□□□□□ -1.5
PFDN1-201ENST00000261813 S4R3F8 94 aa5.65□□□□□ -1.51
PFDN1-201ENST00000261813 COA5Q86WW8 74 aa5.64□□□□□ -1.51
PFDN1-201ENST00000261813 LINC01554Q52M75 96 aa5.6□□□□□ -1.51
PFDN1-201ENST00000261813 CSAG1Q6PB30 78 aa5.58□□□□□ -1.52
PFDN1-201ENST00000261813 MT2AP02795 61 aa5.54□□□□□ -1.52
PFDN1-201ENST00000261813 PSPHP1O15172 72 aa5.53□□□□□ -1.52
PFDN1-201ENST00000261813 MT1FP04733 61 aa5.5□□□□□ -1.53
PFDN1-201ENST00000261813 Q5VV11 94 aa5.49□□□□□ -1.53
PFDN1-201ENST00000261813 USH2AO75445 5202 aa5.48□□□□□ -1.53
PFDN1-201ENST00000261813 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
PFDN1-201ENST00000261813 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
PFDN1-201ENST00000261813 A8MU10 97 aa5.44□□□□□ -1.54
PFDN1-201ENST00000261813 H0YAA0 97 aa5.44□□□□□ -1.54
PFDN1-201ENST00000261813 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
PFDN1-201ENST00000261813 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
PFDN1-201ENST00000261813 PRR15LQ9BU68 103 aa5.42□□□□□ -1.54
PFDN1-201ENST00000261813 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
PFDN1-201ENST00000261813 LINC01558Q9Y6Z2 57 aa5.4□□□□□ -1.55
PFDN1-201ENST00000261813 A0A1B0GU69 56 aa5.39□□□□□ -1.55
PFDN1-201ENST00000261813 ADM2Q7Z4H4 148 aa5.36□□□□□ -1.55
PFDN1-201ENST00000261813 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
PFDN1-201ENST00000261813 A6NED7 52 aa5.3□□□□□ -1.56
PFDN1-201ENST00000261813 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
PFDN1-201ENST00000261813 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
PFDN1-201ENST00000261813 A0A1B0GU33 70 aa5.26□□□□□ -1.57
PFDN1-201ENST00000261813 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
PFDN1-201ENST00000261813 M0QZ58 72 aa5.25□□□□□ -1.57
PFDN1-201ENST00000261813 P0C880 135 aa5.25□□□□□ -1.57
PFDN1-201ENST00000261813 MT3P25713 68 aa5.23□□□□□ -1.57
PFDN1-201ENST00000261813 R4GN34 69 aa5.22□□□□□ -1.57
PFDN1-201ENST00000261813 UQCR11O14957 56 aa5.21□□□□□ -1.58
PFDN1-201ENST00000261813 ROMO1P60602 79 aa5.19□□□□□ -1.58
PFDN1-201ENST00000261813 SPRR2GQ9BYE4 73 aa5.19□□□□□ -1.58
PFDN1-201ENST00000261813 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
PFDN1-201ENST00000261813 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.16□□□□□ -1.58
PFDN1-201ENST00000261813 KRTAP19-6Q3LI70 58 aa5.16□□□□□ -1.58
PFDN1-201ENST00000261813 KRTAP5-11Q6L8G4 156 aa5.16□□□□□ -1.58
PFDN1-201ENST00000261813 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
PFDN1-201ENST00000261813 MT1BP07438 61 aa5.12□□□□□ -1.59
PFDN1-201ENST00000261813 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
PFDN1-201ENST00000261813 MIR22HGQ0VDD5 57 aa5.11□□□□□ -1.59
PFDN1-201ENST00000261813 SPATA8Q6RVD6 105 aa5.09□□□□□ -1.59
PFDN1-201ENST00000261813 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
PFDN1-201ENST00000261813 LCE1EQ5T753 118 aa5.03□□□□□ -1.6
PFDN1-201ENST00000261813 A0A0D9SG42 100 aa5.02□□□□□ -1.61
PFDN1-201ENST00000261813 K7ERS5 55 aa5.01□□□□□ -1.61
PFDN1-201ENST00000261813 PLAC4Q8WY50 150 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms