RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 KRTAP1-4P0C5Y4 121 aa7.96□□□□□ -1.13
KCTD3-201ENST00000259154 M0QZ58 72 aa7.96□□□□□ -1.14
KCTD3-201ENST00000259154 DYNC1H1Q14204 4646 aaKnown RBP7.92□□□□□ -1.14
KCTD3-201ENST00000259154 KMT2CQ8NEZ4 4911 aaKnown RBP7.88□□□□□ -1.15
KCTD3-201ENST00000259154 RYR2Q92736 4967 aa7.85□□□□□ -1.15
KCTD3-201ENST00000259154 C20orf166-AS1Q96NR2 134 aa7.85□□□□□ -1.15
KCTD3-201ENST00000259154 LRP1Q07954 4544 aaKnown RBP7.84□□□□□ -1.15
KCTD3-201ENST00000259154 P0C880 135 aa7.83□□□□□ -1.16
KCTD3-201ENST00000259154 MYCBP2O75592 4640 aa7.82□□□□□ -1.16
KCTD3-201ENST00000259154 PKHD1L1Q86WI1 4243 aa7.81□□□□□ -1.16
KCTD3-201ENST00000259154 APOBP04114 4563 aaKnown RBP7.81□□□□□ -1.16
KCTD3-201ENST00000259154 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
KCTD3-201ENST00000259154 A0A0A0MQY5 61 aa7.72□□□□□ -1.17
KCTD3-201ENST00000259154 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
KCTD3-201ENST00000259154 TPRXLQ17RH7 258 aa7.71□□□□□ -1.18
KCTD3-201ENST00000259154 RYR3Q15413 4870 aa7.65□□□□□ -1.18
KCTD3-201ENST00000259154 HSPG2P98160 4391 aa7.63□□□□□ -1.19
KCTD3-201ENST00000259154 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
KCTD3-201ENST00000259154 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
KCTD3-201ENST00000259154 FAT3Q8TDW7 4589 aa7.6□□□□□ -1.19
KCTD3-201ENST00000259154 KRTAP12-2P59991 146 aa7.6□□□□□ -1.19
KCTD3-201ENST00000259154 A0A1B0GVY2 172 aa7.55□□□□□ -1.2
KCTD3-201ENST00000259154 LPAP08519 4548 aa7.54□□□□□ -1.2
KCTD3-201ENST00000259154 TNXBP22105 4242 aa7.54□□□□□ -1.2
KCTD3-201ENST00000259154 KRTAP10-4P60372 401 aaPredicted RBP7.54□□□□□ -1.2
KCTD3-201ENST00000259154 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
KCTD3-201ENST00000259154 XP32Q5T750 250 aa7.52□□□□□ -1.21
KCTD3-201ENST00000259154 KIAA1109Q2LD37 5005 aa7.51□□□□□ -1.21
KCTD3-201ENST00000259154 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
KCTD3-201ENST00000259154 M0R2T5 61 aa7.47□□□□□ -1.21
KCTD3-201ENST00000259154 KRTAP17-1Q9BYP8 105 aa7.46□□□□□ -1.21
KCTD3-201ENST00000259154 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
KCTD3-201ENST00000259154 KRTAP12-1P59990 96 aa7.39□□□□□ -1.23
KCTD3-201ENST00000259154 RYR1P21817 5038 aa7.38□□□□□ -1.23
KCTD3-201ENST00000259154 LRP2P98164 4655 aa7.38□□□□□ -1.23
KCTD3-201ENST00000259154 EPPK1P58107 5090 aaKnown RBP7.33□□□□□ -1.24
KCTD3-201ENST00000259154 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
KCTD3-201ENST00000259154 KRTAP3-3Q9BYR6 98 aa7.23□□□□□ -1.25
KCTD3-201ENST00000259154 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
KCTD3-201ENST00000259154 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.26
KCTD3-201ENST00000259154 TNP1P09430 55 aa7.18□□□□□ -1.26
KCTD3-201ENST00000259154 MUC2Q02817 5179 aa7.11□□□□□ -1.27
KCTD3-201ENST00000259154 MT1HL1P0DM35 61 aa7.08□□□□□ -1.28
KCTD3-201ENST00000259154 KRTAP4-5Q9BYR2 181 aa7.07□□□□□ -1.28
KCTD3-201ENST00000259154 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
KCTD3-201ENST00000259154 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
KCTD3-201ENST00000259154 HERC2O95714 4834 aa6.85□□□□□ -1.31
KCTD3-201ENST00000259154 KRTAP4-1Q9BYQ7 146 aa6.77□□□□□ -1.33
KCTD3-201ENST00000259154 MUC17Q685J3 4493 aa6.77□□□□□ -1.33
KCTD3-201ENST00000259154 BIRC6Q9NR09 4857 aa6.76□□□□□ -1.33
KCTD3-201ENST00000259154 HERC1Q15751 4861 aa6.75□□□□□ -1.33
KCTD3-201ENST00000259154 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
KCTD3-201ENST00000259154 FAT4Q6V0I7 4981 aa6.72□□□□□ -1.33
KCTD3-201ENST00000259154 PCLOQ9Y6V0 5065 aa6.63□□□□□ -1.35
KCTD3-201ENST00000259154 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
KCTD3-201ENST00000259154 HMCN2Q8NDA2 5059 aa6.5□□□□□ -1.37
KCTD3-201ENST00000259154 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.38
KCTD3-201ENST00000259154 KRTAP19-2Q3LHN2 52 aa6.45□□□□□ -1.38
KCTD3-201ENST00000259154 UBR4Q5T4S7 5183 aa6.41□□□□□ -1.38
KCTD3-201ENST00000259154 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
KCTD3-201ENST00000259154 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.42
KCTD3-201ENST00000259154 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
KCTD3-201ENST00000259154 KRTAP10-12P60413 245 aa6.1□□□□□ -1.43
KCTD3-201ENST00000259154 LCE2CQ5TA81 110 aa6.09□□□□□ -1.43
KCTD3-201ENST00000259154 INE1O15225 51 aa6.06□□□□□ -1.44
KCTD3-201ENST00000259154 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
KCTD3-201ENST00000259154 MT1HP80294 61 aa5.99□□□□□ -1.45
KCTD3-201ENST00000259154 USH2AO75445 5202 aa5.97□□□□□ -1.45
KCTD3-201ENST00000259154 KRTAP19-1Q8IUB9 90 aa5.96□□□□□ -1.45
KCTD3-201ENST00000259154 MT1FP04733 61 aa5.92□□□□□ -1.46
KCTD3-201ENST00000259154 MT2AP02795 61 aa5.91□□□□□ -1.46
KCTD3-201ENST00000259154 OBSCNQ5VST9 7968 aa5.88□□□□□ -1.47
KCTD3-201ENST00000259154 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
KCTD3-201ENST00000259154 KMT2DO14686 5537 aa5.86□□□□□ -1.47
KCTD3-201ENST00000259154 SPRR2GQ9BYE4 73 aa5.81□□□□□ -1.48
KCTD3-201ENST00000259154 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
KCTD3-201ENST00000259154 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
KCTD3-201ENST00000259154 FSIP2Q5CZC0 6907 aa5.68□□□□□ -1.5
KCTD3-201ENST00000259154 KRTAP8-1Q8IUC2 63 aa5.65□□□□□ -1.51
KCTD3-201ENST00000259154 MT1BP07438 61 aa5.65□□□□□ -1.51
KCTD3-201ENST00000259154 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
KCTD3-201ENST00000259154 KRTAP10-7P60409 375 aaPredicted RBP5.64□□□□□ -1.51
KCTD3-201ENST00000259154 KRTAP10-5P60370 271 aa5.62□□□□□ -1.51
KCTD3-201ENST00000259154 MT1XP80297 61 aa5.61□□□□□ -1.51
KCTD3-201ENST00000259154 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
KCTD3-201ENST00000259154 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
KCTD3-201ENST00000259154 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
KCTD3-201ENST00000259154 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
KCTD3-201ENST00000259154 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
KCTD3-201ENST00000259154 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
KCTD3-201ENST00000259154 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
KCTD3-201ENST00000259154 LCE2BO14633 110 aa5.43□□□□□ -1.54
KCTD3-201ENST00000259154 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
KCTD3-201ENST00000259154 DSTQ03001 7570 aaKnown RBP5.32□□□□□ -1.56
KCTD3-201ENST00000259154 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
KCTD3-201ENST00000259154 SSPOA2VEC9 5147 aa5.2□□□□□ -1.58
KCTD3-201ENST00000259154 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
KCTD3-201ENST00000259154 MT1GP13640 62 aa5.12□□□□□ -1.59
KCTD3-201ENST00000259154 MUC12Q9UKN1 5478 aa5.11□□□□□ -1.59
KCTD3-201ENST00000259154 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms