RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 DYNC1H1Q14204 4646 aaKnown RBP6.01□□□□□ -1.45
TROAP-201ENST00000257909 KRTAP10-6P60371 365 aaPredicted RBP5.99□□□□□ -1.45
TROAP-201ENST00000257909 APOBP04114 4563 aaKnown RBP5.99□□□□□ -1.45
TROAP-201ENST00000257909 TPRXLQ17RH7 258 aa5.99□□□□□ -1.45
TROAP-201ENST00000257909 FAT1Q14517 4588 aa5.98□□□□□ -1.45
TROAP-201ENST00000257909 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
TROAP-201ENST00000257909 A0A0D9SG42 100 aa5.95□□□□□ -1.46
TROAP-201ENST00000257909 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
TROAP-201ENST00000257909 SMR3BP02814 79 aaPredicted RBP5.88□□□□□ -1.47
TROAP-201ENST00000257909 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
TROAP-201ENST00000257909 S4R3F8 94 aa5.87□□□□□ -1.47
TROAP-201ENST00000257909 KRTAP10-4P60372 401 aaPredicted RBP5.86□□□□□ -1.47
TROAP-201ENST00000257909 FAT3Q8TDW7 4589 aa5.82□□□□□ -1.48
TROAP-201ENST00000257909 DMBT1Q9UGM3 2413 aaPredicted RBP5.82□□□□□ -1.48
TROAP-201ENST00000257909 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
TROAP-201ENST00000257909 LUZP6Q538Z0 58 aa5.8□□□□□ -1.48
TROAP-201ENST00000257909 HSPG2P98160 4391 aa5.77□□□□□ -1.49
TROAP-201ENST00000257909 TNXBP22105 4242 aa5.76□□□□□ -1.49
TROAP-201ENST00000257909 LRP1Q07954 4544 aaKnown RBP5.76□□□□□ -1.49
TROAP-201ENST00000257909 A0A1B0GVY2 172 aa5.76□□□□□ -1.49
TROAP-201ENST00000257909 KRTAP12-1P59990 96 aa5.76□□□□□ -1.49
TROAP-201ENST00000257909 XP32Q5T750 250 aa5.75□□□□□ -1.49
TROAP-201ENST00000257909 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
TROAP-201ENST00000257909 RYR2Q92736 4967 aa5.73□□□□□ -1.49
TROAP-201ENST00000257909 M0QZ58 72 aa5.7□□□□□ -1.5
TROAP-201ENST00000257909 MYCBP2O75592 4640 aa5.67□□□□□ -1.5
TROAP-201ENST00000257909 LCE2BO14633 110 aa5.66□□□□□ -1.5
TROAP-201ENST00000257909 KMT2CQ8NEZ4 4911 aaKnown RBP5.64□□□□□ -1.51
TROAP-201ENST00000257909 LCE2CQ5TA81 110 aa5.62□□□□□ -1.51
TROAP-201ENST00000257909 SEC61BP60468 96 aaKnown RBP5.56□□□□□ -1.52
TROAP-201ENST00000257909 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
TROAP-201ENST00000257909 LPAP08519 4548 aa5.54□□□□□ -1.52
TROAP-201ENST00000257909 KRTAP17-1Q9BYP8 105 aa5.52□□□□□ -1.53
TROAP-201ENST00000257909 RYR1P21817 5038 aa5.51□□□□□ -1.53
TROAP-201ENST00000257909 PLAC4Q8WY50 150 aa5.51□□□□□ -1.53
TROAP-201ENST00000257909 Q5VSD8 79 aa5.48□□□□□ -1.53
TROAP-201ENST00000257909 R4GN34 69 aa5.46□□□□□ -1.53
TROAP-201ENST00000257909 LRP2P98164 4655 aa5.46□□□□□ -1.54
TROAP-201ENST00000257909 RYR3Q15413 4870 aa5.46□□□□□ -1.54
TROAP-201ENST00000257909 KIAA1109Q2LD37 5005 aa5.41□□□□□ -1.54
TROAP-201ENST00000257909 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
TROAP-201ENST00000257909 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
TROAP-201ENST00000257909 ABCA13Q86UQ4 5058 aa5.29□□□□□ -1.56
TROAP-201ENST00000257909 BIRC6Q9NR09 4857 aa5.27□□□□□ -1.57
TROAP-201ENST00000257909 LORP23490 312 aaPredicted RBP5.27□□□□□ -1.57
TROAP-201ENST00000257909 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
TROAP-201ENST00000257909 EPPK1P58107 5090 aaKnown RBP5.25□□□□□ -1.57
TROAP-201ENST00000257909 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
TROAP-201ENST00000257909 KRTAP4-5Q9BYR2 181 aa5.14□□□□□ -1.59
TROAP-201ENST00000257909 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
TROAP-201ENST00000257909 KRTAP4-1Q9BYQ7 146 aa5.12□□□□□ -1.59
TROAP-201ENST00000257909 TNP1P09430 55 aa5.09□□□□□ -1.59
TROAP-201ENST00000257909 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
TROAP-201ENST00000257909 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
TROAP-201ENST00000257909 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
TROAP-201ENST00000257909 HERC2O95714 4834 aa5.02□□□□□ -1.61
TROAP-201ENST00000257909 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
TROAP-201ENST00000257909 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
TROAP-201ENST00000257909 MUC2Q02817 5179 aa4.92□□□□□ -1.62
TROAP-201ENST00000257909 HERC1Q15751 4861 aa4.89□□□□□ -1.63
TROAP-201ENST00000257909 INE1O15225 51 aa4.83□□□□□ -1.64
TROAP-201ENST00000257909 SPRR2GQ9BYE4 73 aa4.75□□□□□ -1.65
TROAP-201ENST00000257909 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
TROAP-201ENST00000257909 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
TROAP-201ENST00000257909 HMCN2Q8NDA2 5059 aa4.71□□□□□ -1.66
TROAP-201ENST00000257909 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
TROAP-201ENST00000257909 KRTAP8-1Q8IUC2 63 aa4.65□□□□□ -1.67
TROAP-201ENST00000257909 UBR4Q5T4S7 5183 aa4.56□□□□□ -1.68
TROAP-201ENST00000257909 RNF213Q63HN8 5207 aa4.52□□□□□ -1.69
TROAP-201ENST00000257909 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
TROAP-201ENST00000257909 M0R2T5 61 aa4.51□□□□□ -1.69
TROAP-201ENST00000257909 MT1HP80294 61 aa4.5□□□□□ -1.69
TROAP-201ENST00000257909 MT1FP04733 61 aa4.49□□□□□ -1.69
TROAP-201ENST00000257909 MT2AP02795 61 aa4.48□□□□□ -1.69
TROAP-201ENST00000257909 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
TROAP-201ENST00000257909 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
TROAP-201ENST00000257909 KRTAP10-12P60413 245 aa4.46□□□□□ -1.69
TROAP-201ENST00000257909 KRTAP10-5P60370 271 aa4.44□□□□□ -1.7
TROAP-201ENST00000257909 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
TROAP-201ENST00000257909 MT1XP80297 61 aa4.43□□□□□ -1.7
TROAP-201ENST00000257909 MT1BP07438 61 aa4.38□□□□□ -1.71
TROAP-201ENST00000257909 KRTAP10-7P60409 375 aaPredicted RBP4.32□□□□□ -1.72
TROAP-201ENST00000257909 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
TROAP-201ENST00000257909 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
TROAP-201ENST00000257909 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
TROAP-201ENST00000257909 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
TROAP-201ENST00000257909 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
TROAP-201ENST00000257909 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
TROAP-201ENST00000257909 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
TROAP-201ENST00000257909 KMT2DO14686 5537 aa4.09□□□□□ -1.75
TROAP-201ENST00000257909 KRTAP9-2Q9BYQ4 174 aa4.07□□□□□ -1.76
TROAP-201ENST00000257909 USH2AO75445 5202 aa4.07□□□□□ -1.76
TROAP-201ENST00000257909 KRTAP9-6A0A140TA67 174 aa4.03□□□□□ -1.76
TROAP-201ENST00000257909 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
TROAP-201ENST00000257909 KRTAP4-8A0A0G2JLE6 195 aa3.99□□□□□ -1.77
TROAP-201ENST00000257909 KRTAP4-8Q9BYQ9 185 aa3.99□□□□□ -1.77
TROAP-201ENST00000257909 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
TROAP-201ENST00000257909 KRTAP4-7Q9BYR0 210 aa3.92□□□□□ -1.78
TROAP-201ENST00000257909 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
TROAP-201ENST00000257909 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms