RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 KLKP1Q107X0 134 aa11.5□□□□□ -0.57
LSM7-201ENST00000252622 A8MUN3 132 aa11.49□□□□□ -0.57
LSM7-201ENST00000252622 K7ERU9 68 aa11.48□□□□□ -0.57
LSM7-201ENST00000252622 H3BPC8 53 aa11.47□□□□□ -0.57
LSM7-201ENST00000252622 SCGB1A1P11684 91 aa11.47□□□□□ -0.57
LSM7-201ENST00000252622 IMUPQ9GZP8 106 aa11.46□□□□□ -0.57
LSM7-201ENST00000252622 KRTAP19-6Q3LI70 58 aa11.44□□□□□ -0.58
LSM7-201ENST00000252622 NDUFC1O43677 76 aa11.39□□□□□ -0.59
LSM7-201ENST00000252622 MT-ATP8P03928 68 aa11.38□□□□□ -0.59
LSM7-201ENST00000252622 SPRR2GQ9BYE4 73 aa11.33□□□□□ -0.6
LSM7-201ENST00000252622 H0YAA0 97 aa11.27□□□□□ -0.61
LSM7-201ENST00000252622 SMIM20Q8N5G0 67 aa11.26□□□□□ -0.61
LSM7-201ENST00000252622 CRIPTQ9P021 101 aa11.24□□□□□ -0.61
LSM7-201ENST00000252622 KRTAP19-8Q3LI54 63 aa11.23□□□□□ -0.61
LSM7-201ENST00000252622 DMAC1Q96GE9 116 aa11.23□□□□□ -0.61
LSM7-201ENST00000252622 TRAV7A0A075B6U4 112 aa11.21□□□□□ -0.61
LSM7-201ENST00000252622 Q5VV11 94 aa11.2□□□□□ -0.62
LSM7-201ENST00000252622 MT1BP07438 61 aa11.19□□□□□ -0.62
LSM7-201ENST00000252622 ADM2Q7Z4H4 148 aa11.1□□□□□ -0.63
LSM7-201ENST00000252622 MACF1Q9UPN3 7388 aaKnown RBP11.07□□□□□ -0.64
LSM7-201ENST00000252622 SYNE2Q8WXH0 6885 aaKnown RBP11□□□□□ -0.65
LSM7-201ENST00000252622 A6NN06 94 aa10.97□□□□□ -0.65
LSM7-201ENST00000252622 ACYP2P14621 99 aa10.97□□□□□ -0.65
LSM7-201ENST00000252622 SNURFQ9Y675 71 aa10.93□□□□□ -0.66
LSM7-201ENST00000252622 C20orf197Q8N268 126 aa10.92□□□□□ -0.66
LSM7-201ENST00000252622 SERP2Q8N6R1 65 aa10.91□□□□□ -0.66
LSM7-201ENST00000252622 KRTAP10-5P60370 271 aa10.9□□□□□ -0.66
LSM7-201ENST00000252622 P0C880 135 aa10.88□□□□□ -0.67
LSM7-201ENST00000252622 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
LSM7-201ENST00000252622 SPANXA2-OT1Q8N9U9 137 aa10.82□□□□□ -0.68
LSM7-201ENST00000252622 SPTSSBQ8NFR3 76 aa10.82□□□□□ -0.68
LSM7-201ENST00000252622 R4GN34 69 aa10.82□□□□□ -0.68
LSM7-201ENST00000252622 CHKB-CPT1BH3BT56 60 aa10.76□□□□□ -0.69
LSM7-201ENST00000252622 M0QZ58 72 aa10.74□□□□□ -0.69
LSM7-201ENST00000252622 KRTAP6-3Q3LI67 103 aa10.72□□□□□ -0.69
LSM7-201ENST00000252622 PLAC4Q8WY50 150 aa10.65□□□□□ -0.7
LSM7-201ENST00000252622 COX7CP15954 63 aa10.63□□□□□ -0.71
LSM7-201ENST00000252622 PRO2289Q9P1D8 64 aa10.58□□□□□ -0.72
LSM7-201ENST00000252622 MT1XP80297 61 aa10.55□□□□□ -0.72
LSM7-201ENST00000252622 LINC01554Q52M75 96 aa10.54□□□□□ -0.72
LSM7-201ENST00000252622 COA5Q86WW8 74 aa10.47□□□□□ -0.73
LSM7-201ENST00000252622 H7BZZ5 65 aa10.42□□□□□ -0.74
LSM7-201ENST00000252622 CYSTM1Q9H1C7 97 aa10.41□□□□□ -0.74
LSM7-201ENST00000252622 MUC12Q9UKN1 5478 aa10.37□□□□□ -0.75
LSM7-201ENST00000252622 NEBP20929 6669 aa10.36□□□□□ -0.75
LSM7-201ENST00000252622 KRTAP5-9P26371 169 aa10.34□□□□□ -0.75
LSM7-201ENST00000252622 ANAPC13Q9BS18 74 aa10.33□□□□□ -0.76
LSM7-201ENST00000252622 KRTAP12-2P59991 146 aa10.28□□□□□ -0.76
LSM7-201ENST00000252622 KRTAP20-1Q3LI63 56 aa10.27□□□□□ -0.77
LSM7-201ENST00000252622 KMT2DO14686 5537 aa10.27□□□□□ -0.77
LSM7-201ENST00000252622 KRTAP13-4Q3LI77 160 aa10.25□□□□□ -0.77
LSM7-201ENST00000252622 SEC61GP60059 68 aa10.21□□□□□ -0.77
LSM7-201ENST00000252622 SERP1Q9Y6X1 66 aa10.19□□□□□ -0.78
LSM7-201ENST00000252622 MDN1Q9NU22 5596 aa10.13□□□□□ -0.79
LSM7-201ENST00000252622 CCDC179H3BU77 68 aa10.12□□□□□ -0.79
LSM7-201ENST00000252622 KRTAP8-1Q8IUC2 63 aa10.09□□□□□ -0.79
LSM7-201ENST00000252622 KRTAP10-7P60409 375 aaPredicted RBP10.05□□□□□ -0.8
LSM7-201ENST00000252622 SPRR2FQ96RM1 72 aa10.05□□□□□ -0.8
LSM7-201ENST00000252622 KRTAP10-12P60413 245 aa10.03□□□□□ -0.8
LSM7-201ENST00000252622 A0A1B0GU33 70 aa10.02□□□□□ -0.81
LSM7-201ENST00000252622 ATP5EP56381 51 aaPredicted RBP10□□□□□ -0.81
LSM7-201ENST00000252622 KRTAP4-8A0A0G2JLE6 195 aa9.98□□□□□ -0.81
LSM7-201ENST00000252622 KRTAP4-8Q9BYQ9 185 aa9.98□□□□□ -0.81
LSM7-201ENST00000252622 CAMK2N1Q7Z7J9 78 aa9.97□□□□□ -0.81
LSM7-201ENST00000252622 SPATA8Q6RVD6 105 aa9.96□□□□□ -0.82
LSM7-201ENST00000252622 A0A0D9SG42 100 aa9.94□□□□□ -0.82
LSM7-201ENST00000252622 A0A1B0GU69 56 aa9.93□□□□□ -0.82
LSM7-201ENST00000252622 SPRR2EP22531 72 aa9.84□□□□□ -0.83
LSM7-201ENST00000252622 SPRR2BP35325 72 aa9.84□□□□□ -0.83
LSM7-201ENST00000252622 SPRR2AP35326 72 aa9.84□□□□□ -0.83
LSM7-201ENST00000252622 TMEM258P61165 79 aa9.79□□□□□ -0.84
LSM7-201ENST00000252622 SPINT4Q6UDR6 99 aa9.79□□□□□ -0.84
LSM7-201ENST00000252622 KRTAP12-1P59990 96 aa9.78□□□□□ -0.84
LSM7-201ENST00000252622 LCE1AQ5T7P2 110 aa9.76□□□□□ -0.85
LSM7-201ENST00000252622 SMIM26A0A096LP01 95 aa9.75□□□□□ -0.85
LSM7-201ENST00000252622 KRTAP2-3P0C7H8 128 aa9.75□□□□□ -0.85
LSM7-201ENST00000252622 KRTAP2-4Q9BYR9 128 aa9.75□□□□□ -0.85
LSM7-201ENST00000252622 PRR15LQ9BU68 103 aa9.71□□□□□ -0.86
LSM7-201ENST00000252622 LINC01558Q9Y6Z2 57 aa9.67□□□□□ -0.86
LSM7-201ENST00000252622 A8MU10 97 aa9.64□□□□□ -0.87
LSM7-201ENST00000252622 SPRR2DP22532 72 aa9.52□□□□□ -0.89
LSM7-201ENST00000252622 KRTAP19-7Q3SYF9 63 aa9.43□□□□□ -0.9
LSM7-201ENST00000252622 UQCR11O14957 56 aa9.39□□□□□ -0.91
LSM7-201ENST00000252622 KRTAP2-2Q9BYT5 123 aa9.39□□□□□ -0.91
LSM7-201ENST00000252622 KRTAP2-1Q9BYU5 128 aa9.39□□□□□ -0.91
LSM7-201ENST00000252622 MT1EP04732 61 aa9.34□□□□□ -0.91
LSM7-201ENST00000252622 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
LSM7-201ENST00000252622 TNP1P09430 55 aa9.26□□□□□ -0.93
LSM7-201ENST00000252622 LCE3BQ5TA77 95 aa9.24□□□□□ -0.93
LSM7-201ENST00000252622 KRTAP19-5Q3LI72 72 aa9.23□□□□□ -0.93
LSM7-201ENST00000252622 V9GYY9 64 aa9.23□□□□□ -0.93
LSM7-201ENST00000252622 KRTAP19-3Q7Z4W3 81 aa9.22□□□□□ -0.93
LSM7-201ENST00000252622 LCE5AQ5TCM9 118 aa9.21□□□□□ -0.94
LSM7-201ENST00000252622 MIR22HGQ0VDD5 57 aa9.18□□□□□ -0.94
LSM7-201ENST00000252622 Q1T7F1 81 aa9.16□□□□□ -0.94
LSM7-201ENST00000252622 LCE3AQ5TA76 89 aa9.13□□□□□ -0.95
LSM7-201ENST00000252622 PSPHP1O15172 72 aa9.1□□□□□ -0.95
LSM7-201ENST00000252622 GPR98Q8WXG9 6306 aa9.05□□□□□ -0.96
LSM7-201ENST00000252622 MT1GP13640 62 aa9.02□□□□□ -0.97
LSM7-201ENST00000252622 K7ERS5 55 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms