RNA–Protein interactions for RNA: ENST00000252595.11

SLC27A1-201, Transcript of solute carrier family 27 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC27A1, Length 3,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-201ENST00000252595 LINC01554Q52M75 96 aa8.72□□□□□ -1.01
SLC27A1-201ENST00000252595 RYR2Q92736 4967 aa8.7□□□□□ -1.02
SLC27A1-201ENST00000252595 XP32Q5T750 250 aa8.69□□□□□ -1.02
SLC27A1-201ENST00000252595 CSAG1Q6PB30 78 aa8.68□□□□□ -1.02
SLC27A1-201ENST00000252595 KRTAP10-8P60410 259 aa8.66□□□□□ -1.02
SLC27A1-201ENST00000252595 S4R3F8 94 aa8.65□□□□□ -1.02
SLC27A1-201ENST00000252595 H1FX-AS1Q4G0G2 97 aa8.65□□□□□ -1.03
SLC27A1-201ENST00000252595 SPINT4Q6UDR6 99 aa8.65□□□□□ -1.03
SLC27A1-201ENST00000252595 RPL37P61927 97 aaKnown RBP8.63□□□□□ -1.03
SLC27A1-201ENST00000252595 H0YAA0 97 aa8.62□□□□□ -1.03
SLC27A1-201ENST00000252595 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
SLC27A1-201ENST00000252595 H3BS24 57 aa8.6□□□□□ -1.03
SLC27A1-201ENST00000252595 KRTAP4-5Q9BYR2 181 aa8.56□□□□□ -1.04
SLC27A1-201ENST00000252595 P0C880 135 aa8.48□□□□□ -1.05
SLC27A1-201ENST00000252595 LRP2P98164 4655 aa8.46□□□□□ -1.05
SLC27A1-201ENST00000252595 HSPG2P98160 4391 aa8.46□□□□□ -1.06
SLC27A1-201ENST00000252595 MT1HL1P0DM35 61 aa8.45□□□□□ -1.06
SLC27A1-201ENST00000252595 EPPK1P58107 5090 aaKnown RBP8.42□□□□□ -1.06
SLC27A1-201ENST00000252595 PKHD1L1Q86WI1 4243 aa8.39□□□□□ -1.07
SLC27A1-201ENST00000252595 LPAP08519 4548 aa8.34□□□□□ -1.07
SLC27A1-201ENST00000252595 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
SLC27A1-201ENST00000252595 M0QZ58 72 aa8.3□□□□□ -1.08
SLC27A1-201ENST00000252595 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
SLC27A1-201ENST00000252595 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
SLC27A1-201ENST00000252595 R4GN34 69 aa8.28□□□□□ -1.08
SLC27A1-201ENST00000252595 KRTAP10-6P60371 365 aaPredicted RBP8.25□□□□□ -1.09
SLC27A1-201ENST00000252595 SEC61BP60468 96 aaKnown RBP8.25□□□□□ -1.09
SLC27A1-201ENST00000252595 ABCA13Q86UQ4 5058 aa8.23□□□□□ -1.09
SLC27A1-201ENST00000252595 ROMO1P60602 79 aa8.21□□□□□ -1.09
SLC27A1-201ENST00000252595 TPRXLQ17RH7 258 aa8.21□□□□□ -1.1
SLC27A1-201ENST00000252595 TNXBP22105 4242 aa8.17□□□□□ -1.1
SLC27A1-201ENST00000252595 KRTAP25-1Q3LHN0 102 aa8.16□□□□□ -1.1
SLC27A1-201ENST00000252595 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
SLC27A1-201ENST00000252595 HERC2O95714 4834 aa8.14□□□□□ -1.11
SLC27A1-201ENST00000252595 MUC2Q02817 5179 aa8.12□□□□□ -1.11
SLC27A1-201ENST00000252595 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
SLC27A1-201ENST00000252595 M0R2T5 61 aa8.06□□□□□ -1.12
SLC27A1-201ENST00000252595 CAMK2N1Q7Z7J9 78 aa8.05□□□□□ -1.12
SLC27A1-201ENST00000252595 KRTAP4-1Q9BYQ7 146 aa7.96□□□□□ -1.14
SLC27A1-201ENST00000252595 KRTAP12-1P59990 96 aa7.94□□□□□ -1.14
SLC27A1-201ENST00000252595 LORP23490 312 aaPredicted RBP7.92□□□□□ -1.14
SLC27A1-201ENST00000252595 HERC1Q15751 4861 aa7.88□□□□□ -1.15
SLC27A1-201ENST00000252595 RNF213Q63HN8 5207 aa7.8□□□□□ -1.16
SLC27A1-201ENST00000252595 FAT4Q6V0I7 4981 aa7.75□□□□□ -1.17
SLC27A1-201ENST00000252595 NDUFAF8A1L188 74 aa7.62□□□□□ -1.19
SLC27A1-201ENST00000252595 PCLOQ9Y6V0 5065 aa7.62□□□□□ -1.19
SLC27A1-201ENST00000252595 BIRC6Q9NR09 4857 aa7.57□□□□□ -1.2
SLC27A1-201ENST00000252595 UBR4Q5T4S7 5183 aa7.55□□□□□ -1.2
SLC27A1-201ENST00000252595 KRTAP10-10P60014 251 aa7.51□□□□□ -1.21
SLC27A1-201ENST00000252595 PLAC4Q8WY50 150 aa7.48□□□□□ -1.21
SLC27A1-201ENST00000252595 MUC17Q685J3 4493 aa7.39□□□□□ -1.23
SLC27A1-201ENST00000252595 TNP1P09430 55 aa7.36□□□□□ -1.23
SLC27A1-201ENST00000252595 A0A0A0MQY5 61 aa7.31□□□□□ -1.24
SLC27A1-201ENST00000252595 HMCN2Q8NDA2 5059 aa7.29□□□□□ -1.24
SLC27A1-201ENST00000252595 LUZP6Q538Z0 58 aa7.29□□□□□ -1.24
SLC27A1-201ENST00000252595 KRTAP19-2Q3LHN2 52 aa7.25□□□□□ -1.25
SLC27A1-201ENST00000252595 FLGP20930 4061 aaPredicted RBP7.19□□□□□ -1.26
SLC27A1-201ENST00000252595 KRTAP15-1Q3LI76 137 aa7.18□□□□□ -1.26
SLC27A1-201ENST00000252595 MT1HP80294 61 aa7.13□□□□□ -1.27
SLC27A1-201ENST00000252595 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
SLC27A1-201ENST00000252595 FSIP2Q5CZC0 6907 aa7.08□□□□□ -1.28
SLC27A1-201ENST00000252595 PP632Q6XCG6 107 aa7.07□□□□□ -1.28
SLC27A1-201ENST00000252595 MT1FP04733 61 aa7.06□□□□□ -1.28
SLC27A1-201ENST00000252595 MT2AP02795 61 aa7.02□□□□□ -1.29
SLC27A1-201ENST00000252595 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
SLC27A1-201ENST00000252595 USH2AO75445 5202 aa6.95□□□□□ -1.3
SLC27A1-201ENST00000252595 LCE3AQ5TA76 89 aa6.92□□□□□ -1.3
SLC27A1-201ENST00000252595 SPRR2GQ9BYE4 73 aa6.85□□□□□ -1.31
SLC27A1-201ENST00000252595 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
SLC27A1-201ENST00000252595 KMT2DO14686 5537 aa6.71□□□□□ -1.34
SLC27A1-201ENST00000252595 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
SLC27A1-201ENST00000252595 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.35
SLC27A1-201ENST00000252595 MT1BP07438 61 aa6.63□□□□□ -1.35
SLC27A1-201ENST00000252595 KRTAP10-7P60409 375 aaPredicted RBP6.6□□□□□ -1.35
SLC27A1-201ENST00000252595 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
SLC27A1-201ENST00000252595 MT1XP80297 61 aa6.57□□□□□ -1.36
SLC27A1-201ENST00000252595 KRTAP10-5P60370 271 aa6.55□□□□□ -1.36
SLC27A1-201ENST00000252595 KRTAP9-3Q9BYQ3 159 aa6.5□□□□□ -1.37
SLC27A1-201ENST00000252595 KRTAP19-8Q3LI54 63 aa6.48□□□□□ -1.37
SLC27A1-201ENST00000252595 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
SLC27A1-201ENST00000252595 LCE2BO14633 110 aa6.43□□□□□ -1.38
SLC27A1-201ENST00000252595 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
SLC27A1-201ENST00000252595 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
SLC27A1-201ENST00000252595 KRTAP19-5Q3LI72 72 aa6.34□□□□□ -1.39
SLC27A1-201ENST00000252595 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
SLC27A1-201ENST00000252595 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
SLC27A1-201ENST00000252595 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
SLC27A1-201ENST00000252595 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
SLC27A1-201ENST00000252595 OBSCNQ5VST9 7968 aa6.13□□□□□ -1.43
SLC27A1-201ENST00000252595 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
SLC27A1-201ENST00000252595 LCE2AQ5TA79 106 aaPredicted RBP6.11□□□□□ -1.43
SLC27A1-201ENST00000252595 FCGBPQ9Y6R7 5405 aaPredicted RBP6.07□□□□□ -1.44
SLC27A1-201ENST00000252595 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
SLC27A1-201ENST00000252595 MUC12Q9UKN1 5478 aa6.04□□□□□ -1.44
SLC27A1-201ENST00000252595 SYNE1Q8NF91 8797 aaKnown RBP6.03□□□□□ -1.44
SLC27A1-201ENST00000252595 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
SLC27A1-201ENST00000252595 KRTAP19-7Q3SYF9 63 aa5.81□□□□□ -1.48
SLC27A1-201ENST00000252595 KRTAP4-3Q9BYR4 195 aa5.8□□□□□ -1.48
SLC27A1-201ENST00000252595 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
SLC27A1-201ENST00000252595 SPRR2FQ96RM1 72 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms