RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 IGKV4-1P06312 121 aa5.09□□□□□ -1.59
VPS50-201ENST00000251739 Q1T7F1 81 aa5.08□□□□□ -1.6
VPS50-201ENST00000251739 PDE6GP18545 87 aa5.07□□□□□ -1.6
VPS50-201ENST00000251739 RBM12B-AS1Q9P1G2 102 aa5.07□□□□□ -1.6
VPS50-201ENST00000251739 KRTAP10-10P60014 251 aa5.06□□□□□ -1.6
VPS50-201ENST00000251739 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
VPS50-201ENST00000251739 IGKV3D-7A0A0C4DH55 119 aa5.04□□□□□ -1.6
VPS50-201ENST00000251739 CXCL6P80162 114 aa5.04□□□□□ -1.6
VPS50-201ENST00000251739 DEFB116Q30KQ4 102 aa5.04□□□□□ -1.6
VPS50-201ENST00000251739 Q6ZVQ6 151 aa5.04□□□□□ -1.6
VPS50-201ENST00000251739 ORMDL1Q9P0S3 153 aa5.04□□□□□ -1.6
VPS50-201ENST00000251739 IGHV6-1A0A0B4J1U7 121 aa5.03□□□□□ -1.6
VPS50-201ENST00000251739 CYSTM1Q9H1C7 97 aa5.03□□□□□ -1.6
VPS50-201ENST00000251739 SYNE2Q8WXH0 6885 aaKnown RBP5.02□□□□□ -1.61
VPS50-201ENST00000251739 A0A1B0GVX0 72 aa5.01□□□□□ -1.61
VPS50-201ENST00000251739 C8orf87E5RJ46 101 aa5.01□□□□□ -1.61
VPS50-201ENST00000251739 TMEM256-PLSCR3K7ERE1 68 aa5.01□□□□□ -1.61
VPS50-201ENST00000251739 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
VPS50-201ENST00000251739 LINC00846Q9NV44 126 aa5.01□□□□□ -1.61
VPS50-201ENST00000251739 CYP4F30PQ9H0H9 118 aa5□□□□□ -1.61
VPS50-201ENST00000251739 ZCCHC13Q8WW36 166 aaKnown RBP4.99□□□□□ -1.61
VPS50-201ENST00000251739 LCA10Q71F78 164 aa4.98□□□□□ -1.61
VPS50-201ENST00000251739 NDUFB1O75438 58 aa4.97□□□□□ -1.61
VPS50-201ENST00000251739 SPINK7P58062 85 aa4.97□□□□□ -1.61
VPS50-201ENST00000251739 TMEM254Q8TBM7 123 aa4.97□□□□□ -1.61
VPS50-201ENST00000251739 A0A087WVE0 104 aa4.96□□□□□ -1.62
VPS50-201ENST00000251739 C7orf65Q6ZTY9 151 aa4.95□□□□□ -1.62
VPS50-201ENST00000251739 C14orf132Q9NPU4 83 aa4.95□□□□□ -1.62
VPS50-201ENST00000251739 A8MWP4 228 aa4.93□□□□□ -1.62
VPS50-201ENST00000251739 LOC110117498A0A087WWA1 95 aa4.92□□□□□ -1.62
VPS50-201ENST00000251739 hDV103S1A0JD37 113 aa4.92□□□□□ -1.62
VPS50-201ENST00000251739 NREPQ16612 68 aa4.92□□□□□ -1.62
VPS50-201ENST00000251739 Q6ZQT0 140 aa4.92□□□□□ -1.62
VPS50-201ENST00000251739 WFDC13Q8IUB5 93 aa4.91□□□□□ -1.62
VPS50-201ENST00000251739 SNURFQ9Y675 71 aa4.91□□□□□ -1.62
VPS50-201ENST00000251739 BPY2O14599 106 aa4.89□□□□□ -1.63
VPS50-201ENST00000251739 C8orf17Q9NRJ1 99 aa4.89□□□□□ -1.63
VPS50-201ENST00000251739 A0A1B0GW54 56 aa4.88□□□□□ -1.63
VPS50-201ENST00000251739 TRAV22A0A0B4J277 110 aa4.87□□□□□ -1.63
VPS50-201ENST00000251739 KRTAP6-3Q3LI67 103 aa4.85□□□□□ -1.63
VPS50-201ENST00000251739 A8MUN3 132 aa4.84□□□□□ -1.63
VPS50-201ENST00000251739 CHKB-CPT1BH3BT56 60 aa4.84□□□□□ -1.63
VPS50-201ENST00000251739 MP68P56378 58 aa4.84□□□□□ -1.63
VPS50-201ENST00000251739 CDC42SE1Q9NRR8 79 aa4.84□□□□□ -1.63
VPS50-201ENST00000251739 MMP24-AS1A0A0U1RRL7 71 aa4.82□□□□□ -1.64
VPS50-201ENST00000251739 A6NN06 94 aa4.82□□□□□ -1.64
VPS50-201ENST00000251739 HCG22E2RYF7 251 aa4.82□□□□□ -1.64
VPS50-201ENST00000251739 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
VPS50-201ENST00000251739 H3BPC8 53 aa4.81□□□□□ -1.64
VPS50-201ENST00000251739 H1FX-AS1Q4G0G2 97 aa4.81□□□□□ -1.64
VPS50-201ENST00000251739 C1orf64Q8NEQ6 169 aa4.81□□□□□ -1.64
VPS50-201ENST00000251739 SPTSSBQ8NFR3 76 aa4.81□□□□□ -1.64
VPS50-201ENST00000251739 PSPHP1O15172 72 aa4.8□□□□□ -1.64
VPS50-201ENST00000251739 SPANXA2-OT1Q8N9U9 137 aa4.8□□□□□ -1.64
VPS50-201ENST00000251739 OCR1Q9BZK8 76 aa4.8□□□□□ -1.64
VPS50-201ENST00000251739 A6NED7 52 aa4.79□□□□□ -1.64
VPS50-201ENST00000251739 LINC01554Q52M75 96 aa4.79□□□□□ -1.64
VPS50-201ENST00000251739 CASC2Q6XLA1 102 aa4.79□□□□□ -1.64
VPS50-201ENST00000251739 MRPL34Q9BQ48 92 aaKnown RBP4.79□□□□□ -1.64
VPS50-201ENST00000251739 LOC101927531A0A1B0GV80 90 aa4.78□□□□□ -1.64
VPS50-201ENST00000251739 NEBP20929 6669 aa4.78□□□□□ -1.64
VPS50-201ENST00000251739 Q5VV11 94 aa4.77□□□□□ -1.65
VPS50-201ENST00000251739 K7EQZ3 153 aa4.75□□□□□ -1.65
VPS50-201ENST00000251739 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
VPS50-201ENST00000251739 Q5W150 140 aa4.74□□□□□ -1.65
VPS50-201ENST00000251739 LINC00208Q96KT6 92 aa4.73□□□□□ -1.65
VPS50-201ENST00000251739 MT3P25713 68 aa4.72□□□□□ -1.65
VPS50-201ENST00000251739 PRR15LQ9BU68 103 aa4.72□□□□□ -1.65
VPS50-201ENST00000251739 MT1BP07438 61 aa4.7□□□□□ -1.66
VPS50-201ENST00000251739 KRTAP19-8Q3LI54 63 aa4.67□□□□□ -1.66
VPS50-201ENST00000251739 LINC01558Q9Y6Z2 57 aa4.66□□□□□ -1.66
VPS50-201ENST00000251739 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.67
VPS50-201ENST00000251739 Q8N9L7 120 aa4.64□□□□□ -1.67
VPS50-201ENST00000251739 KMT2DO14686 5537 aa4.63□□□□□ -1.67
VPS50-201ENST00000251739 MDN1Q9NU22 5596 aa4.63□□□□□ -1.67
VPS50-201ENST00000251739 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
VPS50-201ENST00000251739 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
VPS50-201ENST00000251739 S4R3F8 94 aa4.59□□□□□ -1.67
VPS50-201ENST00000251739 H0Y9P7 68 aa4.57□□□□□ -1.68
VPS50-201ENST00000251739 CSAG1Q6PB30 78 aa4.57□□□□□ -1.68
VPS50-201ENST00000251739 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
VPS50-201ENST00000251739 COA5Q86WW8 74 aa4.54□□□□□ -1.68
VPS50-201ENST00000251739 TP53AIP1Q9HCN2 124 aa4.51□□□□□ -1.69
VPS50-201ENST00000251739 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
VPS50-201ENST00000251739 A8MU10 97 aa4.46□□□□□ -1.7
VPS50-201ENST00000251739 SPATA8Q6RVD6 105 aa4.46□□□□□ -1.7
VPS50-201ENST00000251739 UQCR11O14957 56 aa4.45□□□□□ -1.7
VPS50-201ENST00000251739 ROMO1P60602 79 aa4.43□□□□□ -1.7
VPS50-201ENST00000251739 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
VPS50-201ENST00000251739 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
VPS50-201ENST00000251739 H0YAA0 97 aa4.4□□□□□ -1.71
VPS50-201ENST00000251739 ACYP2P14621 99 aa4.4□□□□□ -1.71
VPS50-201ENST00000251739 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
VPS50-201ENST00000251739 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
VPS50-201ENST00000251739 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
VPS50-201ENST00000251739 A0A1B0GU69 56 aa4.37□□□□□ -1.71
VPS50-201ENST00000251739 K7ERS5 55 aa4.37□□□□□ -1.71
VPS50-201ENST00000251739 MT1XP80297 61 aa4.36□□□□□ -1.71
VPS50-201ENST00000251739 DMAC1Q96GE9 116 aa4.36□□□□□ -1.71
VPS50-201ENST00000251739 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms