RNA–Protein interactions for RNA: ENST00000249330.2

VGF-201, Transcript of VGF nerve growth factor inducible, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VGF, Length 2,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGF-201ENST00000249330 C9orf92A6NGG3 77 aa10.88□□□□□ -0.67
VGF-201ENST00000249330 KRTAP4-5Q9BYR2 181 aa10.88□□□□□ -0.67
VGF-201ENST00000249330 H0YAA0 97 aa10.87□□□□□ -0.67
VGF-201ENST00000249330 MT1HL1P0DM35 61 aa10.82□□□□□ -0.68
VGF-201ENST00000249330 A8MUU9 505 aa10.82□□□□□ -0.68
VGF-201ENST00000249330 A0A1B0GU33 70 aa10.8□□□□□ -0.68
VGF-201ENST00000249330 C20orf166-AS1Q96NR2 134 aa10.79□□□□□ -0.68
VGF-201ENST00000249330 KRTAP3-1Q9BYR8 98 aa10.76□□□□□ -0.69
VGF-201ENST00000249330 H1FX-AS1Q4G0G2 97 aa10.75□□□□□ -0.69
VGF-201ENST00000249330 KRTAP25-1Q3LHN0 102 aa10.69□□□□□ -0.7
VGF-201ENST00000249330 ABCA13Q86UQ4 5058 aa10.68□□□□□ -0.7
VGF-201ENST00000249330 BIRC6Q9NR09 4857 aa10.61□□□□□ -0.71
VGF-201ENST00000249330 K7ERS5 55 aa10.59□□□□□ -0.71
VGF-201ENST00000249330 COX6B2Q6YFQ2 88 aa10.58□□□□□ -0.72
VGF-201ENST00000249330 HERC2O95714 4834 aa10.57□□□□□ -0.72
VGF-201ENST00000249330 ROMO1P60602 79 aa10.55□□□□□ -0.72
VGF-201ENST00000249330 XP32Q5T750 250 aa10.48□□□□□ -0.73
VGF-201ENST00000249330 LPAP08519 4548 aa10.45□□□□□ -0.74
VGF-201ENST00000249330 J3QL48 77 aa10.41□□□□□ -0.74
VGF-201ENST00000249330 CRIPTQ9P021 101 aa10.41□□□□□ -0.74
VGF-201ENST00000249330 RPL37P61927 97 aaKnown RBP10.4□□□□□ -0.74
VGF-201ENST00000249330 LRP2P98164 4655 aa10.4□□□□□ -0.75
VGF-201ENST00000249330 TPRXLQ17RH7 258 aa10.32□□□□□ -0.76
VGF-201ENST00000249330 PCLOQ9Y6V0 5065 aa10.32□□□□□ -0.76
VGF-201ENST00000249330 KRTAP10-6P60371 365 aaPredicted RBP10.31□□□□□ -0.76
VGF-201ENST00000249330 KRTAP3-3Q9BYR6 98 aa10.28□□□□□ -0.76
VGF-201ENST00000249330 A0A0D9SG42 100 aa10.25□□□□□ -0.77
VGF-201ENST00000249330 KRTAP13-4Q3LI77 160 aa10.25□□□□□ -0.77
VGF-201ENST00000249330 P0C880 135 aa10.24□□□□□ -0.77
VGF-201ENST00000249330 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.78
VGF-201ENST00000249330 S4R3F8 94 aa10.21□□□□□ -0.78
VGF-201ENST00000249330 HERC1Q15751 4861 aa10.14□□□□□ -0.79
VGF-201ENST00000249330 SPINT4Q6UDR6 99 aa10.03□□□□□ -0.8
VGF-201ENST00000249330 C10orf95Q9H7T3 257 aa9.99□□□□□ -0.81
VGF-201ENST00000249330 KRTAP12-2P59991 146 aa9.96□□□□□ -0.81
VGF-201ENST00000249330 SEC61BP60468 96 aaKnown RBP9.95□□□□□ -0.82
VGF-201ENST00000249330 HMCN2Q8NDA2 5059 aa9.92□□□□□ -0.82
VGF-201ENST00000249330 KRTAP4-1Q9BYQ7 146 aa9.91□□□□□ -0.82
VGF-201ENST00000249330 MUC2Q02817 5179 aa9.91□□□□□ -0.82
VGF-201ENST00000249330 MUC17Q685J3 4493 aa9.88□□□□□ -0.83
VGF-201ENST00000249330 KRTAP12-1P59990 96 aa9.87□□□□□ -0.83
VGF-201ENST00000249330 KRTAP15-1Q3LI76 137 aa9.87□□□□□ -0.83
VGF-201ENST00000249330 NDUFAF8A1L188 74 aa9.79□□□□□ -0.84
VGF-201ENST00000249330 M0QZ58 72 aa9.78□□□□□ -0.84
VGF-201ENST00000249330 KRTAP19-2Q3LHN2 52 aa9.61□□□□□ -0.87
VGF-201ENST00000249330 UBR4Q5T4S7 5183 aa9.61□□□□□ -0.87
VGF-201ENST00000249330 RNF213Q63HN8 5207 aa9.54□□□□□ -0.88
VGF-201ENST00000249330 R4GN34 69 aa9.49□□□□□ -0.89
VGF-201ENST00000249330 FAT4Q6V0I7 4981 aa9.46□□□□□ -0.89
VGF-201ENST00000249330 FLGP20930 4061 aaPredicted RBP9.32□□□□□ -0.92
VGF-201ENST00000249330 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
VGF-201ENST00000249330 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
VGF-201ENST00000249330 PLAC4Q8WY50 150 aa9.24□□□□□ -0.93
VGF-201ENST00000249330 MT1HP80294 61 aa9.11□□□□□ -0.95
VGF-201ENST00000249330 PP632Q6XCG6 107 aa9.08□□□□□ -0.96
VGF-201ENST00000249330 M0R2T5 61 aa9.07□□□□□ -0.96
VGF-201ENST00000249330 CAMK2N1Q7Z7J9 78 aa9.06□□□□□ -0.96
VGF-201ENST00000249330 LUZP6Q538Z0 58 aa9□□□□□ -0.97
VGF-201ENST00000249330 A0A0A0MQY5 61 aa8.99□□□□□ -0.97
VGF-201ENST00000249330 KRTAP9-8Q9BYQ0 159 aa8.81□□□□□ -1
VGF-201ENST00000249330 MT2AP02795 61 aa8.78□□□□□ -1
VGF-201ENST00000249330 MT1FP04733 61 aa8.77□□□□□ -1
VGF-201ENST00000249330 TNP1P09430 55 aa8.75□□□□□ -1.01
VGF-201ENST00000249330 KRTAP10-10P60014 251 aa8.74□□□□□ -1.01
VGF-201ENST00000249330 KRTAP23-1A1A580 65 aa8.68□□□□□ -1.02
VGF-201ENST00000249330 KRTAP19-1Q8IUB9 90 aa8.68□□□□□ -1.02
VGF-201ENST00000249330 SPRR2GQ9BYE4 73 aa8.64□□□□□ -1.03
VGF-201ENST00000249330 LCE2AQ5TA79 106 aaPredicted RBP8.59□□□□□ -1.03
VGF-201ENST00000249330 SPRR5A0A1B0GTR4 108 aa8.53□□□□□ -1.04
VGF-201ENST00000249330 KRTAP9-3Q9BYQ3 159 aa8.46□□□□□ -1.05
VGF-201ENST00000249330 KRTAP19-8Q3LI54 63 aa8.36□□□□□ -1.07
VGF-201ENST00000249330 MT1BP07438 61 aa8.32□□□□□ -1.08
VGF-201ENST00000249330 USH2AO75445 5202 aa8.26□□□□□ -1.09
VGF-201ENST00000249330 LCE2BO14633 110 aa8.25□□□□□ -1.09
VGF-201ENST00000249330 LCE3AQ5TA76 89 aa8.22□□□□□ -1.09
VGF-201ENST00000249330 KRTAP10-5P60370 271 aa8.1□□□□□ -1.11
VGF-201ENST00000249330 MT1XP80297 61 aa8.1□□□□□ -1.11
VGF-201ENST00000249330 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
VGF-201ENST00000249330 KRTAP8-1Q8IUC2 63 aa8.01□□□□□ -1.13
VGF-201ENST00000249330 FSIP2Q5CZC0 6907 aa7.96□□□□□ -1.13
VGF-201ENST00000249330 INE1O15225 51 aa7.9□□□□□ -1.14
VGF-201ENST00000249330 KRTAP10-7P60409 375 aaPredicted RBP7.85□□□□□ -1.15
VGF-201ENST00000249330 KRTAP12-3P60328 96 aa7.82□□□□□ -1.16
VGF-201ENST00000249330 KRTAP10-12P60413 245 aa7.81□□□□□ -1.16
VGF-201ENST00000249330 SSPOA2VEC9 5147 aa7.8□□□□□ -1.16
VGF-201ENST00000249330 KMT2DO14686 5537 aa7.72□□□□□ -1.17
VGF-201ENST00000249330 LCE2DQ5TA82 110 aaPredicted RBP7.63□□□□□ -1.19
VGF-201ENST00000249330 KRTAP19-6Q3LI70 58 aa7.58□□□□□ -1.2
VGF-201ENST00000249330 KRTAP4-8A0A0G2JLE6 195 aa7.56□□□□□ -1.2
VGF-201ENST00000249330 KRTAP4-8Q9BYQ9 185 aa7.56□□□□□ -1.2
VGF-201ENST00000249330 FCGBPQ9Y6R7 5405 aaPredicted RBP7.42□□□□□ -1.22
VGF-201ENST00000249330 KRTAP19-5Q3LI72 72 aa7.39□□□□□ -1.23
VGF-201ENST00000249330 LCE3CQ5T5A8 94 aa7.38□□□□□ -1.23
VGF-201ENST00000249330 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
VGF-201ENST00000249330 KRTAP19-7Q3SYF9 63 aa7.23□□□□□ -1.25
VGF-201ENST00000249330 MACF1Q9UPN3 7388 aaKnown RBP7.12□□□□□ -1.27
VGF-201ENST00000249330 KRTAP9-6A8MVA2 160 aa7.11□□□□□ -1.27
VGF-201ENST00000249330 CRCT1Q9UGL9 99 aa7.11□□□□□ -1.27
VGF-201ENST00000249330 MT1EP04732 61 aa7.06□□□□□ -1.28
VGF-201ENST00000249330 MUC12Q9UKN1 5478 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms