RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 A0A1B0GU33 70 aa8.82□□□□□ -1
SSPN-201ENST00000242729 LPAP08519 4548 aa8.81□□□□□ -1
SSPN-201ENST00000242729 COX6B2Q6YFQ2 88 aa8.79□□□□□ -1
SSPN-201ENST00000242729 CSAG1Q6PB30 78 aa8.78□□□□□ -1
SSPN-201ENST00000242729 KRTAP10-8P60410 259 aa8.76□□□□□ -1.01
SSPN-201ENST00000242729 H1FX-AS1Q4G0G2 97 aa8.75□□□□□ -1.01
SSPN-201ENST00000242729 RYR1P21817 5038 aa8.75□□□□□ -1.01
SSPN-201ENST00000242729 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
SSPN-201ENST00000242729 LINC01554Q52M75 96 aa8.7□□□□□ -1.02
SSPN-201ENST00000242729 LRP2P98164 4655 aa8.69□□□□□ -1.02
SSPN-201ENST00000242729 XP32Q5T750 250 aa8.69□□□□□ -1.02
SSPN-201ENST00000242729 A0A0D9SG42 100 aa8.65□□□□□ -1.02
SSPN-201ENST00000242729 EPPK1P58107 5090 aaKnown RBP8.65□□□□□ -1.02
SSPN-201ENST00000242729 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.03
SSPN-201ENST00000242729 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
SSPN-201ENST00000242729 ABCA13Q86UQ4 5058 aa8.6□□□□□ -1.03
SSPN-201ENST00000242729 KRTAP13-4Q3LI77 160 aa8.57□□□□□ -1.04
SSPN-201ENST00000242729 KRTAP10-6P60371 365 aaPredicted RBP8.55□□□□□ -1.04
SSPN-201ENST00000242729 S4R3F8 94 aa8.55□□□□□ -1.04
SSPN-201ENST00000242729 MT1HL1P0DM35 61 aa8.54□□□□□ -1.04
SSPN-201ENST00000242729 P0C880 135 aa8.52□□□□□ -1.05
SSPN-201ENST00000242729 KRTAP3-2Q9BYR7 98 aa8.48□□□□□ -1.05
SSPN-201ENST00000242729 K7ERS5 55 aa8.45□□□□□ -1.06
SSPN-201ENST00000242729 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
SSPN-201ENST00000242729 KRTAP25-1Q3LHN0 102 aa8.39□□□□□ -1.07
SSPN-201ENST00000242729 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
SSPN-201ENST00000242729 KRTAP12-2P59991 146 aa8.28□□□□□ -1.08
SSPN-201ENST00000242729 ROMO1P60602 79 aa8.28□□□□□ -1.08
SSPN-201ENST00000242729 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.08
SSPN-201ENST00000242729 MUC2Q02817 5179 aa8.25□□□□□ -1.09
SSPN-201ENST00000242729 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
SSPN-201ENST00000242729 KRTAP12-1P59990 96 aa8.14□□□□□ -1.11
SSPN-201ENST00000242729 HERC2O95714 4834 aa8.13□□□□□ -1.11
SSPN-201ENST00000242729 KRTAP4-1Q9BYQ7 146 aa8.08□□□□□ -1.12
SSPN-201ENST00000242729 M0QZ58 72 aa8.07□□□□□ -1.12
SSPN-201ENST00000242729 MUC17Q685J3 4493 aa8.07□□□□□ -1.12
SSPN-201ENST00000242729 J3QL48 77 aa8.04□□□□□ -1.12
SSPN-201ENST00000242729 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
SSPN-201ENST00000242729 R4GN34 69 aa8□□□□□ -1.13
SSPN-201ENST00000242729 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
SSPN-201ENST00000242729 HERC1Q15751 4861 aa7.94□□□□□ -1.14
SSPN-201ENST00000242729 FAT4Q6V0I7 4981 aa7.82□□□□□ -1.16
SSPN-201ENST00000242729 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
SSPN-201ENST00000242729 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
SSPN-201ENST00000242729 RNF213Q63HN8 5207 aa7.67□□□□□ -1.18
SSPN-201ENST00000242729 BIRC6Q9NR09 4857 aa7.66□□□□□ -1.18
SSPN-201ENST00000242729 KRTAP15-1Q3LI76 137 aa7.64□□□□□ -1.19
SSPN-201ENST00000242729 CAMK2N1Q7Z7J9 78 aa7.64□□□□□ -1.19
SSPN-201ENST00000242729 A0A0A0MQY5 61 aa7.63□□□□□ -1.19
SSPN-201ENST00000242729 NDUFAF8A1L188 74 aa7.63□□□□□ -1.19
SSPN-201ENST00000242729 FLGP20930 4061 aaPredicted RBP7.63□□□□□ -1.19
SSPN-201ENST00000242729 HMCN2Q8NDA2 5059 aa7.6□□□□□ -1.19
SSPN-201ENST00000242729 UBR4Q5T4S7 5183 aa7.51□□□□□ -1.21
SSPN-201ENST00000242729 PLAC4Q8WY50 150 aa7.39□□□□□ -1.23
SSPN-201ENST00000242729 M0R2T5 61 aa7.38□□□□□ -1.23
SSPN-201ENST00000242729 LCE2CQ5TA81 110 aa7.34□□□□□ -1.23
SSPN-201ENST00000242729 TNP1P09430 55 aa7.21□□□□□ -1.26
SSPN-201ENST00000242729 LUZP6Q538Z0 58 aa7.19□□□□□ -1.26
SSPN-201ENST00000242729 KRTAP19-1Q8IUB9 90 aa7.17□□□□□ -1.26
SSPN-201ENST00000242729 MT1HP80294 61 aa7.16□□□□□ -1.26
SSPN-201ENST00000242729 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
SSPN-201ENST00000242729 KRTAP10-10P60014 251 aa7.14□□□□□ -1.27
SSPN-201ENST00000242729 MT1FP04733 61 aa7.1□□□□□ -1.27
SSPN-201ENST00000242729 SPRR2GQ9BYE4 73 aa7.08□□□□□ -1.28
SSPN-201ENST00000242729 MT2AP02795 61 aa7.05□□□□□ -1.28
SSPN-201ENST00000242729 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
SSPN-201ENST00000242729 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
SSPN-201ENST00000242729 USH2AO75445 5202 aa6.87□□□□□ -1.31
SSPN-201ENST00000242729 MT1BP07438 61 aa6.79□□□□□ -1.32
SSPN-201ENST00000242729 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
SSPN-201ENST00000242729 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
SSPN-201ENST00000242729 MT1XP80297 61 aa6.75□□□□□ -1.33
SSPN-201ENST00000242729 KMT2DO14686 5537 aa6.72□□□□□ -1.33
SSPN-201ENST00000242729 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
SSPN-201ENST00000242729 SPRR5A0A1B0GTR4 108 aa6.68□□□□□ -1.34
SSPN-201ENST00000242729 KRTAP10-7P60409 375 aaPredicted RBP6.67□□□□□ -1.34
SSPN-201ENST00000242729 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
SSPN-201ENST00000242729 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
SSPN-201ENST00000242729 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
SSPN-201ENST00000242729 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
SSPN-201ENST00000242729 LCE2BO14633 110 aa6.5□□□□□ -1.37
SSPN-201ENST00000242729 FSIP2Q5CZC0 6907 aa6.44□□□□□ -1.38
SSPN-201ENST00000242729 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
SSPN-201ENST00000242729 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
SSPN-201ENST00000242729 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
SSPN-201ENST00000242729 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
SSPN-201ENST00000242729 LCE2AQ5TA79 106 aaPredicted RBP6.24□□□□□ -1.41
SSPN-201ENST00000242729 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
SSPN-201ENST00000242729 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
SSPN-201ENST00000242729 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
SSPN-201ENST00000242729 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
SSPN-201ENST00000242729 INE1O15225 51 aa6.02□□□□□ -1.45
SSPN-201ENST00000242729 KRTAP19-7Q3SYF9 63 aa6.01□□□□□ -1.45
SSPN-201ENST00000242729 MUC12Q9UKN1 5478 aa5.91□□□□□ -1.46
SSPN-201ENST00000242729 FCGBPQ9Y6R7 5405 aaPredicted RBP5.89□□□□□ -1.47
SSPN-201ENST00000242729 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
SSPN-201ENST00000242729 MT1LQ93083 61 aa5.82□□□□□ -1.48
SSPN-201ENST00000242729 MT1EP04732 61 aa5.81□□□□□ -1.48
SSPN-201ENST00000242729 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
SSPN-201ENST00000242729 LOC100996750A0A140TA64 210 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms