RNA–Protein interactions for RNA: ENST00000242719.3

RNF11-201, Transcript of ring finger protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF11, Length 3,084 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11-201ENST00000242719 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.11
RNF11-201ENST00000242719 K7ERS5 55 aa8.14□□□□□ -1.11
RNF11-201ENST00000242719 P0C880 135 aa8.14□□□□□ -1.11
RNF11-201ENST00000242719 HSPG2P98160 4391 aa8.11□□□□□ -1.11
RNF11-201ENST00000242719 A0A1B0GVY2 172 aa8.11□□□□□ -1.11
RNF11-201ENST00000242719 RPS29P62273 56 aaKnown RBP8.07□□□□□ -1.12
RNF11-201ENST00000242719 KRTAP17-1Q9BYP8 105 aa8.06□□□□□ -1.12
RNF11-201ENST00000242719 C10orf95Q9H7T3 257 aa8.04□□□□□ -1.12
RNF11-201ENST00000242719 KRTAP13-4Q3LI77 160 aa8.04□□□□□ -1.12
RNF11-201ENST00000242719 PKHD1L1Q86WI1 4243 aa8.02□□□□□ -1.13
RNF11-201ENST00000242719 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
RNF11-201ENST00000242719 RYR1P21817 5038 aa8□□□□□ -1.13
RNF11-201ENST00000242719 TPRXLQ17RH7 258 aa8□□□□□ -1.13
RNF11-201ENST00000242719 RPL37P61927 97 aaKnown RBP7.98□□□□□ -1.13
RNF11-201ENST00000242719 KRTAP10-6P60371 365 aaPredicted RBP7.96□□□□□ -1.14
RNF11-201ENST00000242719 KRTAP10-4P60372 401 aaPredicted RBP7.95□□□□□ -1.14
RNF11-201ENST00000242719 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
RNF11-201ENST00000242719 KRTAP3-3Q9BYR6 98 aa7.89□□□□□ -1.15
RNF11-201ENST00000242719 S4R3F8 94 aa7.87□□□□□ -1.15
RNF11-201ENST00000242719 FAT3Q8TDW7 4589 aa7.86□□□□□ -1.15
RNF11-201ENST00000242719 KRTAP3-2Q9BYR7 98 aa7.86□□□□□ -1.15
RNF11-201ENST00000242719 TNXBP22105 4242 aa7.85□□□□□ -1.15
RNF11-201ENST00000242719 NDUFAF8A1L188 74 aa7.84□□□□□ -1.15
RNF11-201ENST00000242719 Q5VSD8 79 aa7.81□□□□□ -1.16
RNF11-201ENST00000242719 KRTAP12-2P59991 146 aa7.79□□□□□ -1.16
RNF11-201ENST00000242719 XP32Q5T750 250 aa7.79□□□□□ -1.16
RNF11-201ENST00000242719 ABCA13Q86UQ4 5058 aa7.79□□□□□ -1.16
RNF11-201ENST00000242719 LPAP08519 4548 aa7.77□□□□□ -1.17
RNF11-201ENST00000242719 KRTAP4-5Q9BYR2 181 aa7.75□□□□□ -1.17
RNF11-201ENST00000242719 KRTAP15-1Q3LI76 137 aa7.72□□□□□ -1.17
RNF11-201ENST00000242719 LRP2P98164 4655 aa7.69□□□□□ -1.18
RNF11-201ENST00000242719 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
RNF11-201ENST00000242719 HERC2O95714 4834 aa7.63□□□□□ -1.19
RNF11-201ENST00000242719 PCLOQ9Y6V0 5065 aa7.56□□□□□ -1.2
RNF11-201ENST00000242719 BIRC6Q9NR09 4857 aa7.54□□□□□ -1.2
RNF11-201ENST00000242719 HERC1Q15751 4861 aa7.49□□□□□ -1.21
RNF11-201ENST00000242719 MT1HL1P0DM35 61 aa7.49□□□□□ -1.21
RNF11-201ENST00000242719 M0QZ58 72 aa7.48□□□□□ -1.21
RNF11-201ENST00000242719 R4GN34 69 aa7.41□□□□□ -1.22
RNF11-201ENST00000242719 MUC2Q02817 5179 aa7.4□□□□□ -1.22
RNF11-201ENST00000242719 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
RNF11-201ENST00000242719 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
RNF11-201ENST00000242719 J3QL48 77 aa7.17□□□□□ -1.26
RNF11-201ENST00000242719 RNF213Q63HN8 5207 aa7.14□□□□□ -1.27
RNF11-201ENST00000242719 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
RNF11-201ENST00000242719 KRTAP4-1Q9BYQ7 146 aa7.12□□□□□ -1.27
RNF11-201ENST00000242719 HMCN2Q8NDA2 5059 aa7.11□□□□□ -1.27
RNF11-201ENST00000242719 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
RNF11-201ENST00000242719 UBR4Q5T4S7 5183 aa7.1□□□□□ -1.27
RNF11-201ENST00000242719 LUZP6Q538Z0 58 aa7.09□□□□□ -1.27
RNF11-201ENST00000242719 A0A0A0MQY5 61 aa7.09□□□□□ -1.28
RNF11-201ENST00000242719 MUC17Q685J3 4493 aa7.04□□□□□ -1.28
RNF11-201ENST00000242719 FAT4Q6V0I7 4981 aa7.03□□□□□ -1.28
RNF11-201ENST00000242719 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
RNF11-201ENST00000242719 KRTAP19-2Q3LHN2 52 aa6.78□□□□□ -1.32
RNF11-201ENST00000242719 TNP1P09430 55 aa6.73□□□□□ -1.33
RNF11-201ENST00000242719 FLGP20930 4061 aaPredicted RBP6.7□□□□□ -1.34
RNF11-201ENST00000242719 M0R2T5 61 aa6.6□□□□□ -1.35
RNF11-201ENST00000242719 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
RNF11-201ENST00000242719 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
RNF11-201ENST00000242719 LCE3AQ5TA76 89 aa6.41□□□□□ -1.38
RNF11-201ENST00000242719 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
RNF11-201ENST00000242719 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
RNF11-201ENST00000242719 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
RNF11-201ENST00000242719 MT1HP80294 61 aa6.32□□□□□ -1.4
RNF11-201ENST00000242719 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
RNF11-201ENST00000242719 MT1FP04733 61 aa6.26□□□□□ -1.41
RNF11-201ENST00000242719 USH2AO75445 5202 aa6.22□□□□□ -1.41
RNF11-201ENST00000242719 MT2AP02795 61 aa6.2□□□□□ -1.42
RNF11-201ENST00000242719 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
RNF11-201ENST00000242719 FSIP2Q5CZC0 6907 aa6.13□□□□□ -1.43
RNF11-201ENST00000242719 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
RNF11-201ENST00000242719 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
RNF11-201ENST00000242719 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
RNF11-201ENST00000242719 KRTAP10-12P60413 245 aa6.04□□□□□ -1.44
RNF11-201ENST00000242719 KRTAP10-5P60370 271 aa6.04□□□□□ -1.44
RNF11-201ENST00000242719 MT1XP80297 61 aa6.03□□□□□ -1.44
RNF11-201ENST00000242719 MT1BP07438 61 aa6.02□□□□□ -1.45
RNF11-201ENST00000242719 KMT2DO14686 5537 aa6.01□□□□□ -1.45
RNF11-201ENST00000242719 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
RNF11-201ENST00000242719 INE1O15225 51 aa5.99□□□□□ -1.45
RNF11-201ENST00000242719 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
RNF11-201ENST00000242719 LCE2AQ5TA79 106 aaPredicted RBP5.93□□□□□ -1.46
RNF11-201ENST00000242719 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
RNF11-201ENST00000242719 LCE2BO14633 110 aa5.79□□□□□ -1.48
RNF11-201ENST00000242719 KRTAP19-5Q3LI72 72 aa5.77□□□□□ -1.49
RNF11-201ENST00000242719 SSPOA2VEC9 5147 aa5.72□□□□□ -1.49
RNF11-201ENST00000242719 KRTAP4-8A0A0G2JLE6 195 aa5.71□□□□□ -1.5
RNF11-201ENST00000242719 KRTAP4-8Q9BYQ9 185 aa5.71□□□□□ -1.5
RNF11-201ENST00000242719 LCE3CQ5T5A8 94 aa5.63□□□□□ -1.51
RNF11-201ENST00000242719 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
RNF11-201ENST00000242719 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
RNF11-201ENST00000242719 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
RNF11-201ENST00000242719 KRTAP19-7Q3SYF9 63 aa5.36□□□□□ -1.55
RNF11-201ENST00000242719 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
RNF11-201ENST00000242719 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
RNF11-201ENST00000242719 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
RNF11-201ENST00000242719 MACF1Q9UPN3 7388 aaKnown RBP5.29□□□□□ -1.56
RNF11-201ENST00000242719 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
RNF11-201ENST00000242719 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms