RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 Q5W150 140 aa3.66□□□□□ -1.82
IFT43-201ENST00000238628 CSAG1Q6PB30 78 aa3.66□□□□□ -1.82
IFT43-201ENST00000238628 JMJD7-PLA2G4BH0Y9G9 81 aa3.65□□□□□ -1.83
IFT43-201ENST00000238628 LOC110117498A0A087WWA1 95 aa3.64□□□□□ -1.83
IFT43-201ENST00000238628 PDE6GP18545 87 aa3.64□□□□□ -1.83
IFT43-201ENST00000238628 SEC61GP60059 68 aa3.64□□□□□ -1.83
IFT43-201ENST00000238628 KRTAP8-1Q8IUC2 63 aa3.64□□□□□ -1.83
IFT43-201ENST00000238628 S4R3F8 94 aa3.64□□□□□ -1.83
IFT43-201ENST00000238628 K7ERU9 68 aa3.63□□□□□ -1.83
IFT43-201ENST00000238628 KLKP1Q107X0 134 aa3.63□□□□□ -1.83
IFT43-201ENST00000238628 K7EQZ3 153 aa3.62□□□□□ -1.83
IFT43-201ENST00000238628 KRTAP3-1Q9BYR8 98 aa3.61□□□□□ -1.83
IFT43-201ENST00000238628 C14orf132Q9NPU4 83 aa3.61□□□□□ -1.83
IFT43-201ENST00000238628 M0R143 59 aa3.6□□□□□ -1.83
IFT43-201ENST00000238628 ATXN8Q156A1 80 aa3.6□□□□□ -1.83
IFT43-201ENST00000238628 LCA10Q71F78 164 aa3.6□□□□□ -1.83
IFT43-201ENST00000238628 HCG22E2RYF7 251 aa3.59□□□□□ -1.83
IFT43-201ENST00000238628 C1orf64Q8NEQ6 169 aa3.59□□□□□ -1.83
IFT43-201ENST00000238628 CASC2Q6XLA1 102 aa3.57□□□□□ -1.84
IFT43-201ENST00000238628 BPY2O14599 106 aa3.56□□□□□ -1.84
IFT43-201ENST00000238628 CXCL6P80162 114 aa3.56□□□□□ -1.84
IFT43-201ENST00000238628 CRIPTQ9P021 101 aa3.56□□□□□ -1.84
IFT43-201ENST00000238628 V9GYY9 64 aa3.56□□□□□ -1.84
IFT43-201ENST00000238628 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
IFT43-201ENST00000238628 UQCR10Q9UDW1 63 aa3.55□□□□□ -1.84
IFT43-201ENST00000238628 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
IFT43-201ENST00000238628 HMCN1Q96RW7 5635 aa3.54□□□□□ -1.84
IFT43-201ENST00000238628 Q8N9L7 120 aa3.53□□□□□ -1.84
IFT43-201ENST00000238628 NAA38Q9BRA0 125 aaKnown RBP3.53□□□□□ -1.84
IFT43-201ENST00000238628 PYY3Q5JQD4 70 aa3.52□□□□□ -1.85
IFT43-201ENST00000238628 COL5A1-AS1Q5SY13 56 aa3.52□□□□□ -1.85
IFT43-201ENST00000238628 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
IFT43-201ENST00000238628 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
IFT43-201ENST00000238628 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
IFT43-201ENST00000238628 J3QR89 54 aa3.49□□□□□ -1.85
IFT43-201ENST00000238628 MT1XP80297 61 aa3.47□□□□□ -1.85
IFT43-201ENST00000238628 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
IFT43-201ENST00000238628 SMIM20Q8N5G0 67 aa3.47□□□□□ -1.85
IFT43-201ENST00000238628 A0A087WVE0 104 aa3.45□□□□□ -1.86
IFT43-201ENST00000238628 GTF2H5Q6ZYL4 71 aa3.45□□□□□ -1.86
IFT43-201ENST00000238628 PLAC4Q8WY50 150 aa3.45□□□□□ -1.86
IFT43-201ENST00000238628 PRO0628Q9UI54 55 aa3.45□□□□□ -1.86
IFT43-201ENST00000238628 A8MUN3 132 aa3.44□□□□□ -1.86
IFT43-201ENST00000238628 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
IFT43-201ENST00000238628 H0YAA0 97 aa3.42□□□□□ -1.86
IFT43-201ENST00000238628 H3BT86 120 aa3.42□□□□□ -1.86
IFT43-201ENST00000238628 TP53AIP1Q9HCN2 124 aa3.42□□□□□ -1.86
IFT43-201ENST00000238628 RPS28P62857 69 aaKnown RBP3.41□□□□□ -1.86
IFT43-201ENST00000238628 NDUFC1O43677 76 aa3.4□□□□□ -1.87
IFT43-201ENST00000238628 MT4P47944 62 aa3.4□□□□□ -1.87
IFT43-201ENST00000238628 ADM2Q7Z4H4 148 aa3.4□□□□□ -1.87
IFT43-201ENST00000238628 CYP4F30PQ9H0H9 118 aa3.4□□□□□ -1.87
IFT43-201ENST00000238628 ANAPC13Q9BS18 74 aa3.39□□□□□ -1.87
IFT43-201ENST00000238628 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
IFT43-201ENST00000238628 UBL5Q9BZL1 73 aa3.38□□□□□ -1.87
IFT43-201ENST00000238628 BATFQ16520 125 aa3.36□□□□□ -1.87
IFT43-201ENST00000238628 K7EP34 96 aa3.34□□□□□ -1.87
IFT43-201ENST00000238628 LOC101927531A0A1B0GV80 90 aa3.33□□□□□ -1.88
IFT43-201ENST00000238628 C9orf118A6NHY6 69 aa3.33□□□□□ -1.88
IFT43-201ENST00000238628 R4GN34 69 aa3.33□□□□□ -1.88
IFT43-201ENST00000238628 A0A1W2PPM0 123 aa3.32□□□□□ -1.88
IFT43-201ENST00000238628 KRTAP10-7P60409 375 aaPredicted RBP3.32□□□□□ -1.88
IFT43-201ENST00000238628 ACYP1P07311 99 aa3.31□□□□□ -1.88
IFT43-201ENST00000238628 TRAV22A0A0B4J277 110 aa3.3□□□□□ -1.88
IFT43-201ENST00000238628 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
IFT43-201ENST00000238628 M0QZ58 72 aa3.29□□□□□ -1.88
IFT43-201ENST00000238628 TAX1BP3O14907 124 aa3.28□□□□□ -1.88
IFT43-201ENST00000238628 FAM240AA0A1B0GVK7 77 aa3.27□□□□□ -1.89
IFT43-201ENST00000238628 PMAIP1Q13794 54 aa3.27□□□□□ -1.89
IFT43-201ENST00000238628 LINC01554Q52M75 96 aa3.27□□□□□ -1.89
IFT43-201ENST00000238628 SPCS1Q9Y6A9 102 aa3.27□□□□□ -1.89
IFT43-201ENST00000238628 F8W1H4 67 aa3.26□□□□□ -1.89
IFT43-201ENST00000238628 P0C880 135 aa3.26□□□□□ -1.89
IFT43-201ENST00000238628 C20orf197Q8N268 126 aa3.26□□□□□ -1.89
IFT43-201ENST00000238628 H0Y9P7 68 aa3.23□□□□□ -1.89
IFT43-201ENST00000238628 TMEM258P61165 79 aa3.23□□□□□ -1.89
IFT43-201ENST00000238628 ATOX1O00244 68 aa3.22□□□□□ -1.89
IFT43-201ENST00000238628 UQCRQO14949 82 aa3.21□□□□□ -1.9
IFT43-201ENST00000238628 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
IFT43-201ENST00000238628 PRO0461Q9UI25 63 aa3.2□□□□□ -1.9
IFT43-201ENST00000238628 A0A0A0MQY5 61 aa3.18□□□□□ -1.9
IFT43-201ENST00000238628 CCDC179H3BU77 68 aa3.18□□□□□ -1.9
IFT43-201ENST00000238628 LINC00208Q96KT6 92 aa3.17□□□□□ -1.9
IFT43-201ENST00000238628 MT-ATP8P03928 68 aa3.15□□□□□ -1.91
IFT43-201ENST00000238628 SMIM26A0A096LP01 95 aa3.14□□□□□ -1.91
IFT43-201ENST00000238628 HIST1H4AP62805 103 aaKnown RBP3.14□□□□□ -1.91
IFT43-201ENST00000238628 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
IFT43-201ENST00000238628 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
IFT43-201ENST00000238628 BRK1Q8WUW1 75 aa3.13□□□□□ -1.91
IFT43-201ENST00000238628 CYSTM1Q9H1C7 97 aa3.13□□□□□ -1.91
IFT43-201ENST00000238628 SERP1Q9Y6X1 66 aa3.12□□□□□ -1.91
IFT43-201ENST00000238628 ATP5EP56381 51 aaPredicted RBP3.11□□□□□ -1.91
IFT43-201ENST00000238628 ETDBQ3ZM63 59 aa3.11□□□□□ -1.91
IFT43-201ENST00000238628 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
IFT43-201ENST00000238628 COX7CP15954 63 aa3.1□□□□□ -1.91
IFT43-201ENST00000238628 MP68P56378 58 aa3.1□□□□□ -1.91
IFT43-201ENST00000238628 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
IFT43-201ENST00000238628 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
IFT43-201ENST00000238628 MT1EP04732 61 aa3.09□□□□□ -1.91
IFT43-201ENST00000238628 ATP5EP2Q5VTU8 51 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms