RNA–Protein interactions for RNA: ENST00000237353.14

PMFBP1-201, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PMFBP1, Length 3,527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-201ENST00000237353 C9orf92A6NGG3 77 aa3.88□□□□□ -1.79
PMFBP1-201ENST00000237353 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
PMFBP1-201ENST00000237353 RYR1P21817 5038 aa3.88□□□□□ -1.79
PMFBP1-201ENST00000237353 A0A1B0GVY2 172 aa3.88□□□□□ -1.79
PMFBP1-201ENST00000237353 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
PMFBP1-201ENST00000237353 PKHD1P08F94 4074 aa3.87□□□□□ -1.79
PMFBP1-201ENST00000237353 VPS13BQ7Z7G8 4022 aa3.83□□□□□ -1.8
PMFBP1-201ENST00000237353 DYNC1H1Q14204 4646 aaKnown RBP3.83□□□□□ -1.8
PMFBP1-201ENST00000237353 KRTAP10-4P60372 401 aaPredicted RBP3.82□□□□□ -1.8
PMFBP1-201ENST00000237353 PKHD1L1Q86WI1 4243 aa3.79□□□□□ -1.8
PMFBP1-201ENST00000237353 Q8N1X5 172 aa3.79□□□□□ -1.8
PMFBP1-201ENST00000237353 APOBP04114 4563 aaKnown RBP3.77□□□□□ -1.81
PMFBP1-201ENST00000237353 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
PMFBP1-201ENST00000237353 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
PMFBP1-201ENST00000237353 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
PMFBP1-201ENST00000237353 A0A1B0GU33 70 aa3.75□□□□□ -1.81
PMFBP1-201ENST00000237353 FAT1Q14517 4588 aa3.75□□□□□ -1.81
PMFBP1-201ENST00000237353 A0A0D9SG42 100 aa3.74□□□□□ -1.81
PMFBP1-201ENST00000237353 TPRXLQ17RH7 258 aa3.74□□□□□ -1.81
PMFBP1-201ENST00000237353 COX6B2Q6YFQ2 88 aa3.74□□□□□ -1.81
PMFBP1-201ENST00000237353 KRTAP10-8P60410 259 aa3.73□□□□□ -1.81
PMFBP1-201ENST00000237353 HSPG2P98160 4391 aa3.73□□□□□ -1.81
PMFBP1-201ENST00000237353 H0YAA0 97 aa3.71□□□□□ -1.82
PMFBP1-201ENST00000237353 ABCA13Q86UQ4 5058 aa3.7□□□□□ -1.82
PMFBP1-201ENST00000237353 Q5VSD8 79 aa3.7□□□□□ -1.82
PMFBP1-201ENST00000237353 RPL37P61927 97 aaKnown RBP3.7□□□□□ -1.82
PMFBP1-201ENST00000237353 KRTAP3-1Q9BYR8 98 aa3.68□□□□□ -1.82
PMFBP1-201ENST00000237353 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
PMFBP1-201ENST00000237353 LCE2CQ5TA81 110 aa3.67□□□□□ -1.82
PMFBP1-201ENST00000237353 H1FX-AS1Q4G0G2 97 aa3.67□□□□□ -1.82
PMFBP1-201ENST00000237353 LCE2AQ5TA79 106 aaPredicted RBP3.65□□□□□ -1.82
PMFBP1-201ENST00000237353 CAMK2N1Q7Z7J9 78 aa3.64□□□□□ -1.83
PMFBP1-201ENST00000237353 LCE2BO14633 110 aa3.63□□□□□ -1.83
PMFBP1-201ENST00000237353 XP32Q5T750 250 aa3.63□□□□□ -1.83
PMFBP1-201ENST00000237353 UBR4Q5T4S7 5183 aa3.63□□□□□ -1.83
PMFBP1-201ENST00000237353 HERC1Q15751 4861 aa3.62□□□□□ -1.83
PMFBP1-201ENST00000237353 LRP1Q07954 4544 aaKnown RBP3.62□□□□□ -1.83
PMFBP1-201ENST00000237353 S4R3F8 94 aa3.6□□□□□ -1.83
PMFBP1-201ENST00000237353 MYCBP2O75592 4640 aa3.58□□□□□ -1.84
PMFBP1-201ENST00000237353 MT1HL1P0DM35 61 aa3.57□□□□□ -1.84
PMFBP1-201ENST00000237353 TNXBP22105 4242 aa3.57□□□□□ -1.84
PMFBP1-201ENST00000237353 KRTAP9-6A0A140TA67 174 aa3.52□□□□□ -1.85
PMFBP1-201ENST00000237353 KRTAP10-6P60371 365 aaPredicted RBP3.51□□□□□ -1.85
PMFBP1-201ENST00000237353 R4GN34 69 aa3.5□□□□□ -1.85
PMFBP1-201ENST00000237353 KRTAP9-2Q9BYQ4 174 aa3.49□□□□□ -1.85
PMFBP1-201ENST00000237353 M0QZ58 72 aa3.47□□□□□ -1.85
PMFBP1-201ENST00000237353 PRO2289Q9P1D8 64 aa3.43□□□□□ -1.86
PMFBP1-201ENST00000237353 PLAC4Q8WY50 150 aa3.42□□□□□ -1.86
PMFBP1-201ENST00000237353 KRTAP13-4Q3LI77 160 aa3.42□□□□□ -1.86
PMFBP1-201ENST00000237353 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
PMFBP1-201ENST00000237353 LORP23490 312 aaPredicted RBP3.39□□□□□ -1.87
PMFBP1-201ENST00000237353 LPAP08519 4548 aa3.39□□□□□ -1.87
PMFBP1-201ENST00000237353 LRP2P98164 4655 aa3.39□□□□□ -1.87
PMFBP1-201ENST00000237353 KRTAP23-1A1A580 65 aa3.37□□□□□ -1.87
PMFBP1-201ENST00000237353 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
PMFBP1-201ENST00000237353 KRTAP12-2P59991 146 aa3.33□□□□□ -1.88
PMFBP1-201ENST00000237353 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
PMFBP1-201ENST00000237353 M0R2T5 61 aa3.28□□□□□ -1.88
PMFBP1-201ENST00000237353 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
PMFBP1-201ENST00000237353 CRCT1Q9UGL9 99 aa3.26□□□□□ -1.89
PMFBP1-201ENST00000237353 MUC2Q02817 5179 aa3.25□□□□□ -1.89
PMFBP1-201ENST00000237353 KRTAP4-1Q9BYQ7 146 aa3.23□□□□□ -1.89
PMFBP1-201ENST00000237353 KRTAP19-2Q3LHN2 52 aa3.22□□□□□ -1.89
PMFBP1-201ENST00000237353 FAT4Q6V0I7 4981 aa3.19□□□□□ -1.9
PMFBP1-201ENST00000237353 PP632Q6XCG6 107 aa3.19□□□□□ -1.9
PMFBP1-201ENST00000237353 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
PMFBP1-201ENST00000237353 INE1O15225 51 aa3.11□□□□□ -1.91
PMFBP1-201ENST00000237353 TNP1P09430 55 aa3.07□□□□□ -1.92
PMFBP1-201ENST00000237353 FLGP20930 4061 aaPredicted RBP3.06□□□□□ -1.92
PMFBP1-201ENST00000237353 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
PMFBP1-201ENST00000237353 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.02□□□□□ -1.93
PMFBP1-201ENST00000237353 FSIP2Q5CZC0 6907 aa3.02□□□□□ -1.93
PMFBP1-201ENST00000237353 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
PMFBP1-201ENST00000237353 MT1HP80294 61 aa2.98□□□□□ -1.93
PMFBP1-201ENST00000237353 KRTAP19-1Q8IUB9 90 aa2.96□□□□□ -1.94
PMFBP1-201ENST00000237353 KRTAP19-8Q3LI54 63 aa2.93□□□□□ -1.94
PMFBP1-201ENST00000237353 MT2AP02795 61 aa2.93□□□□□ -1.94
PMFBP1-201ENST00000237353 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.94
PMFBP1-201ENST00000237353 MT1FP04733 61 aa2.9□□□□□ -1.95
PMFBP1-201ENST00000237353 KRTAP9-8Q9BYQ0 159 aa2.9□□□□□ -1.95
PMFBP1-201ENST00000237353 KRTAP8-1Q8IUC2 63 aa2.82□□□□□ -1.96
PMFBP1-201ENST00000237353 MT1BP07438 61 aa2.82□□□□□ -1.96
PMFBP1-201ENST00000237353 LCE3AQ5TA76 89 aa2.81□□□□□ -1.96
PMFBP1-201ENST00000237353 USH2AO75445 5202 aa2.8□□□□□ -1.96
PMFBP1-201ENST00000237353 KRTAP9-3Q9BYQ3 159 aa2.8□□□□□ -1.96
PMFBP1-201ENST00000237353 KRTAP10-5P60370 271 aa2.79□□□□□ -1.96
PMFBP1-201ENST00000237353 MT1XP80297 61 aa2.79□□□□□ -1.96
PMFBP1-201ENST00000237353 KRTAP10-12P60413 245 aa2.77□□□□□ -1.97
PMFBP1-201ENST00000237353 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
PMFBP1-201ENST00000237353 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
PMFBP1-201ENST00000237353 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
PMFBP1-201ENST00000237353 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
PMFBP1-201ENST00000237353 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
PMFBP1-201ENST00000237353 KMT2DO14686 5537 aa2.68□□□□□ -1.98
PMFBP1-201ENST00000237353 SYNE2Q8WXH0 6885 aaKnown RBP2.67□□□□□ -1.98
PMFBP1-201ENST00000237353 KRTAP19-4Q3LI73 84 aa2.67□□□□□ -1.98
PMFBP1-201ENST00000237353 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
PMFBP1-201ENST00000237353 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
PMFBP1-201ENST00000237353 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
PMFBP1-201ENST00000237353 NEBP20929 6669 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms