RNA–Protein interactions for RNA: ENST00000229729.10

SLC44A4-202, Transcript of solute carrier family 44 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC44A4, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4-202ENST00000229729 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
SLC44A4-202ENST00000229729 KRTAP3-3Q9BYR6 98 aa6.55□□□□□ -1.36
SLC44A4-202ENST00000229729 S4R3F8 94 aa6.52□□□□□ -1.37
SLC44A4-202ENST00000229729 PKHD1L1Q86WI1 4243 aa6.5□□□□□ -1.37
SLC44A4-202ENST00000229729 KRTAP12-2P59991 146 aa6.45□□□□□ -1.38
SLC44A4-202ENST00000229729 PKHD1P08F94 4074 aa6.45□□□□□ -1.38
SLC44A4-202ENST00000229729 DMBT1Q9UGM3 2413 aaPredicted RBP6.44□□□□□ -1.38
SLC44A4-202ENST00000229729 APOBP04114 4563 aaKnown RBP6.43□□□□□ -1.38
SLC44A4-202ENST00000229729 DYNC1H1Q14204 4646 aaKnown RBP6.42□□□□□ -1.38
SLC44A4-202ENST00000229729 XP32Q5T750 250 aa6.4□□□□□ -1.38
SLC44A4-202ENST00000229729 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
SLC44A4-202ENST00000229729 SMR3BP02814 79 aaPredicted RBP6.36□□□□□ -1.39
SLC44A4-202ENST00000229729 KRTAP10-4P60372 401 aaPredicted RBP6.35□□□□□ -1.39
SLC44A4-202ENST00000229729 FAT1Q14517 4588 aa6.32□□□□□ -1.4
SLC44A4-202ENST00000229729 KRTAP10-8P60410 259 aa6.32□□□□□ -1.4
SLC44A4-202ENST00000229729 A0A1B0GVY2 172 aa6.3□□□□□ -1.4
SLC44A4-202ENST00000229729 M0QZ58 72 aa6.28□□□□□ -1.4
SLC44A4-202ENST00000229729 LRP1Q07954 4544 aaKnown RBP6.23□□□□□ -1.41
SLC44A4-202ENST00000229729 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
SLC44A4-202ENST00000229729 J3QL48 77 aa6.21□□□□□ -1.41
SLC44A4-202ENST00000229729 TNXBP22105 4242 aa6.19□□□□□ -1.42
SLC44A4-202ENST00000229729 HSPG2P98160 4391 aa6.16□□□□□ -1.42
SLC44A4-202ENST00000229729 RYR2Q92736 4967 aa6.16□□□□□ -1.42
SLC44A4-202ENST00000229729 LUZP6Q538Z0 58 aa6.15□□□□□ -1.42
SLC44A4-202ENST00000229729 PLAC4Q8WY50 150 aa6.15□□□□□ -1.42
SLC44A4-202ENST00000229729 R4GN34 69 aa6.02□□□□□ -1.45
SLC44A4-202ENST00000229729 MYCBP2O75592 4640 aa6□□□□□ -1.45
SLC44A4-202ENST00000229729 Q5VSD8 79 aa5.99□□□□□ -1.45
SLC44A4-202ENST00000229729 KMT2CQ8NEZ4 4911 aaKnown RBP5.98□□□□□ -1.45
SLC44A4-202ENST00000229729 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
SLC44A4-202ENST00000229729 RYR1P21817 5038 aa5.93□□□□□ -1.46
SLC44A4-202ENST00000229729 SEC61BP60468 96 aaKnown RBP5.91□□□□□ -1.46
SLC44A4-202ENST00000229729 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
SLC44A4-202ENST00000229729 LPAP08519 4548 aa5.86□□□□□ -1.47
SLC44A4-202ENST00000229729 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
SLC44A4-202ENST00000229729 LORP23490 312 aaPredicted RBP5.8□□□□□ -1.48
SLC44A4-202ENST00000229729 RYR3Q15413 4870 aa5.8□□□□□ -1.48
SLC44A4-202ENST00000229729 LRP2P98164 4655 aa5.77□□□□□ -1.49
SLC44A4-202ENST00000229729 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
SLC44A4-202ENST00000229729 KIAA1109Q2LD37 5005 aa5.72□□□□□ -1.49
SLC44A4-202ENST00000229729 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
SLC44A4-202ENST00000229729 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
SLC44A4-202ENST00000229729 TNP1P09430 55 aa5.61□□□□□ -1.51
SLC44A4-202ENST00000229729 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
SLC44A4-202ENST00000229729 EPPK1P58107 5090 aaKnown RBP5.59□□□□□ -1.51
SLC44A4-202ENST00000229729 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.52
SLC44A4-202ENST00000229729 ABCA13Q86UQ4 5058 aa5.56□□□□□ -1.52
SLC44A4-202ENST00000229729 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
SLC44A4-202ENST00000229729 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
SLC44A4-202ENST00000229729 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
SLC44A4-202ENST00000229729 KRTAP4-1Q9BYQ7 146 aa5.47□□□□□ -1.53
SLC44A4-202ENST00000229729 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
SLC44A4-202ENST00000229729 HERC2O95714 4834 aa5.38□□□□□ -1.55
SLC44A4-202ENST00000229729 INE1O15225 51 aa5.36□□□□□ -1.55
SLC44A4-202ENST00000229729 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
SLC44A4-202ENST00000229729 HERC1Q15751 4861 aa5.29□□□□□ -1.56
SLC44A4-202ENST00000229729 PCLOQ9Y6V0 5065 aa5.27□□□□□ -1.57
SLC44A4-202ENST00000229729 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
SLC44A4-202ENST00000229729 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
SLC44A4-202ENST00000229729 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
SLC44A4-202ENST00000229729 MUC2Q02817 5179 aa5.12□□□□□ -1.59
SLC44A4-202ENST00000229729 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
SLC44A4-202ENST00000229729 HMCN2Q8NDA2 5059 aa5.07□□□□□ -1.6
SLC44A4-202ENST00000229729 LCE2CQ5TA81 110 aa5.05□□□□□ -1.6
SLC44A4-202ENST00000229729 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
SLC44A4-202ENST00000229729 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
SLC44A4-202ENST00000229729 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
SLC44A4-202ENST00000229729 MT1HP80294 61 aa4.9□□□□□ -1.63
SLC44A4-202ENST00000229729 KRTAP19-8Q3LI54 63 aa4.88□□□□□ -1.63
SLC44A4-202ENST00000229729 M0R2T5 61 aa4.87□□□□□ -1.63
SLC44A4-202ENST00000229729 KRTAP10-5P60370 271 aa4.86□□□□□ -1.63
SLC44A4-202ENST00000229729 MT2AP02795 61 aa4.85□□□□□ -1.63
SLC44A4-202ENST00000229729 KRTAP10-10P60014 251 aa4.85□□□□□ -1.63
SLC44A4-202ENST00000229729 MT1FP04733 61 aa4.85□□□□□ -1.63
SLC44A4-202ENST00000229729 MT1XP80297 61 aa4.85□□□□□ -1.63
SLC44A4-202ENST00000229729 LCE2AQ5TA79 106 aaPredicted RBP4.82□□□□□ -1.64
SLC44A4-202ENST00000229729 KRTAP9-8Q9BYQ0 159 aa4.81□□□□□ -1.64
SLC44A4-202ENST00000229729 RNF213Q63HN8 5207 aa4.8□□□□□ -1.64
SLC44A4-202ENST00000229729 LCE2BO14633 110 aa4.8□□□□□ -1.64
SLC44A4-202ENST00000229729 MT1BP07438 61 aa4.78□□□□□ -1.64
SLC44A4-202ENST00000229729 KRTAP9-6A0A140TA67 174 aa4.76□□□□□ -1.65
SLC44A4-202ENST00000229729 UBR4Q5T4S7 5183 aa4.76□□□□□ -1.65
SLC44A4-202ENST00000229729 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
SLC44A4-202ENST00000229729 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
SLC44A4-202ENST00000229729 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
SLC44A4-202ENST00000229729 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
SLC44A4-202ENST00000229729 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
SLC44A4-202ENST00000229729 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
SLC44A4-202ENST00000229729 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
SLC44A4-202ENST00000229729 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
SLC44A4-202ENST00000229729 KRTAP9-2Q9BYQ4 174 aa4.43□□□□□ -1.7
SLC44A4-202ENST00000229729 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
SLC44A4-202ENST00000229729 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
SLC44A4-202ENST00000229729 KRTAP4-8Q9BYQ9 185 aa4.33□□□□□ -1.72
SLC44A4-202ENST00000229729 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
SLC44A4-202ENST00000229729 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
SLC44A4-202ENST00000229729 KMT2DO14686 5537 aa4.27□□□□□ -1.73
SLC44A4-202ENST00000229729 MT1LQ93083 61 aa4.23□□□□□ -1.73
SLC44A4-202ENST00000229729 USH2AO75445 5202 aa4.19□□□□□ -1.74
SLC44A4-202ENST00000229729 MT1EP04732 61 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms