RNA–Protein interactions for RNA: ENST00000228425.10

PPFIBP1-201, Transcript of PPFIA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIBP1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-201ENST00000228425 SPRR1AP35321 89 aa3.59□□□□□ -1.83
PPFIBP1-201ENST00000228425 PLAC8Q9NZF1 115 aa3.59□□□□□ -1.84
PPFIBP1-201ENST00000228425 MMP24-AS1A0A0U1RRL7 71 aa3.56□□□□□ -1.84
PPFIBP1-201ENST00000228425 SPRR1BP22528 89 aa3.56□□□□□ -1.84
PPFIBP1-201ENST00000228425 KRTAP26-1Q6PEX3 210 aa3.55□□□□□ -1.84
PPFIBP1-201ENST00000228425 TNP1P09430 55 aa3.52□□□□□ -1.85
PPFIBP1-201ENST00000228425 C10orf95Q9H7T3 257 aa3.51□□□□□ -1.85
PPFIBP1-201ENST00000228425 A8MU10 97 aa3.51□□□□□ -1.85
PPFIBP1-201ENST00000228425 PANO1I0J062 215 aa3.51□□□□□ -1.85
PPFIBP1-201ENST00000228425 MUC2Q02817 5179 aa3.51□□□□□ -1.85
PPFIBP1-201ENST00000228425 FAT1Q14517 4588 aa3.49□□□□□ -1.85
PPFIBP1-201ENST00000228425 LRP1Q07954 4544 aaKnown RBP3.48□□□□□ -1.85
PPFIBP1-201ENST00000228425 LINC00472Q9H8W2 130 aa3.48□□□□□ -1.85
PPFIBP1-201ENST00000228425 DYNC1H1Q14204 4646 aaKnown RBP3.47□□□□□ -1.85
PPFIBP1-201ENST00000228425 HERC1Q15751 4861 aa3.47□□□□□ -1.85
PPFIBP1-201ENST00000228425 KRTAP10-1P60331 282 aa3.46□□□□□ -1.86
PPFIBP1-201ENST00000228425 TNXBP22105 4242 aa3.44□□□□□ -1.86
PPFIBP1-201ENST00000228425 KRTAP29-1A8MX34 341 aaPredicted RBP3.42□□□□□ -1.86
PPFIBP1-201ENST00000228425 RNF213Q63HN8 5207 aa3.41□□□□□ -1.86
PPFIBP1-201ENST00000228425 KRTAP10-2P60368 255 aa3.41□□□□□ -1.86
PPFIBP1-201ENST00000228425 KRTAP10-8P60410 259 aa3.41□□□□□ -1.86
PPFIBP1-201ENST00000228425 FLG2Q5D862 2391 aaPredicted RBP3.41□□□□□ -1.86
PPFIBP1-201ENST00000228425 KRTAP1-5Q9BYS1 174 aa3.4□□□□□ -1.86
PPFIBP1-201ENST00000228425 LPAP08519 4548 aa3.4□□□□□ -1.87
PPFIBP1-201ENST00000228425 UBR4Q5T4S7 5183 aa3.39□□□□□ -1.87
PPFIBP1-201ENST00000228425 HERC2O95714 4834 aa3.38□□□□□ -1.87
PPFIBP1-201ENST00000228425 PRO2289Q9P1D8 64 aa3.37□□□□□ -1.87
PPFIBP1-201ENST00000228425 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
PPFIBP1-201ENST00000228425 BIRC6Q9NR09 4857 aa3.37□□□□□ -1.87
PPFIBP1-201ENST00000228425 LCE2DQ5TA82 110 aaPredicted RBP3.35□□□□□ -1.87
PPFIBP1-201ENST00000228425 KRTAP7-1Q8IUC3 87 aa3.35□□□□□ -1.87
PPFIBP1-201ENST00000228425 RPS29P62273 56 aaKnown RBP3.35□□□□□ -1.87
PPFIBP1-201ENST00000228425 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.88
PPFIBP1-201ENST00000228425 KRTAP13-1Q8IUC0 172 aa3.32□□□□□ -1.88
PPFIBP1-201ENST00000228425 DMBT1Q9UGM3 2413 aaPredicted RBP3.3□□□□□ -1.88
PPFIBP1-201ENST00000228425 Q6ZRN7 208 aaPredicted RBP3.3□□□□□ -1.88
PPFIBP1-201ENST00000228425 FAT4Q6V0I7 4981 aa3.3□□□□□ -1.88
PPFIBP1-201ENST00000228425 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
PPFIBP1-201ENST00000228425 KRTAP10-10P60014 251 aa3.28□□□□□ -1.88
PPFIBP1-201ENST00000228425 LRP2P98164 4655 aa3.28□□□□□ -1.89
PPFIBP1-201ENST00000228425 KRTAP11-1Q8IUC1 163 aa3.28□□□□□ -1.89
PPFIBP1-201ENST00000228425 KRTAP3-1Q9BYR8 98 aa3.24□□□□□ -1.89
PPFIBP1-201ENST00000228425 INE1O15225 51 aa3.23□□□□□ -1.89
PPFIBP1-201ENST00000228425 KRTAP17-1Q9BYP8 105 aa3.22□□□□□ -1.89
PPFIBP1-201ENST00000228425 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.89
PPFIBP1-201ENST00000228425 LCE2CQ5TA81 110 aa3.2□□□□□ -1.9
PPFIBP1-201ENST00000228425 TPRXLQ17RH7 258 aa3.17□□□□□ -1.9
PPFIBP1-201ENST00000228425 KRTAP13-2Q52LG2 175 aa3.17□□□□□ -1.9
PPFIBP1-201ENST00000228425 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.91
PPFIBP1-201ENST00000228425 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
PPFIBP1-201ENST00000228425 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
PPFIBP1-201ENST00000228425 XP32Q5T750 250 aa3.11□□□□□ -1.91
PPFIBP1-201ENST00000228425 LCE2BO14633 110 aa3.1□□□□□ -1.91
PPFIBP1-201ENST00000228425 KRTAP1-4P0C5Y4 121 aa3.08□□□□□ -1.92
PPFIBP1-201ENST00000228425 KRTAP13-3Q3SY46 172 aa3.08□□□□□ -1.92
PPFIBP1-201ENST00000228425 H0YAA0 97 aa3.07□□□□□ -1.92
PPFIBP1-201ENST00000228425 LCE2AQ5TA79 106 aaPredicted RBP3.06□□□□□ -1.92
PPFIBP1-201ENST00000228425 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
PPFIBP1-201ENST00000228425 LORP23490 312 aaPredicted RBP3.01□□□□□ -1.93
PPFIBP1-201ENST00000228425 CRCT1Q9UGL9 99 aa2.96□□□□□ -1.94
PPFIBP1-201ENST00000228425 KRTAP13-4Q3LI77 160 aa2.92□□□□□ -1.94
PPFIBP1-201ENST00000228425 USH2AO75445 5202 aa2.92□□□□□ -1.94
PPFIBP1-201ENST00000228425 KRTAP10-4P60372 401 aaPredicted RBP2.9□□□□□ -1.95
PPFIBP1-201ENST00000228425 KRTAP10-6P60371 365 aaPredicted RBP2.87□□□□□ -1.95
PPFIBP1-201ENST00000228425 KRTAP19-2Q3LHN2 52 aa2.84□□□□□ -1.95
PPFIBP1-201ENST00000228425 MT3P25713 68 aa2.83□□□□□ -1.96
PPFIBP1-201ENST00000228425 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
PPFIBP1-201ENST00000228425 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
PPFIBP1-201ENST00000228425 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
PPFIBP1-201ENST00000228425 MT1HL1P0DM35 61 aa2.7□□□□□ -1.98
PPFIBP1-201ENST00000228425 KRTAP10-5P60370 271 aa2.7□□□□□ -1.98
PPFIBP1-201ENST00000228425 KRTAP4-5Q9BYR2 181 aa2.65□□□□□ -1.99
PPFIBP1-201ENST00000228425 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
PPFIBP1-201ENST00000228425 KRTAP8-1Q8IUC2 63 aa2.63□□□□□ -1.99
PPFIBP1-201ENST00000228425 KRTAP10-7P60409 375 aaPredicted RBP2.59□□□□□ -2
PPFIBP1-201ENST00000228425 LCE3AQ5TA76 89 aa2.53□□□□□ -2
PPFIBP1-201ENST00000228425 KMT2DO14686 5537 aa2.53□□□□□ -2
PPFIBP1-201ENST00000228425 FCGBPQ9Y6R7 5405 aaPredicted RBP2.45□□□□□ -2.02
PPFIBP1-201ENST00000228425 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
PPFIBP1-201ENST00000228425 SPRR2FQ96RM1 72 aa2.41□□□□□ -2.02
PPFIBP1-201ENST00000228425 MT1HP80294 61 aa2.37□□□□□ -2.03
PPFIBP1-201ENST00000228425 MUC12Q9UKN1 5478 aa2.37□□□□□ -2.03
PPFIBP1-201ENST00000228425 LCE5AQ5TCM9 118 aa2.36□□□□□ -2.03
PPFIBP1-201ENST00000228425 KRTAP4-1Q9BYQ7 146 aa2.35□□□□□ -2.03
PPFIBP1-201ENST00000228425 SPRR2EP22531 72 aa2.33□□□□□ -2.04
PPFIBP1-201ENST00000228425 SPRR2BP35325 72 aa2.33□□□□□ -2.04
PPFIBP1-201ENST00000228425 SPRR2AP35326 72 aa2.33□□□□□ -2.04
PPFIBP1-201ENST00000228425 SPRR2GQ9BYE4 73 aa2.32□□□□□ -2.04
PPFIBP1-201ENST00000228425 KRTAP9-4Q9BYQ2 154 aa2.31□□□□□ -2.04
PPFIBP1-201ENST00000228425 FSIP2Q5CZC0 6907 aa2.3□□□□□ -2.04
PPFIBP1-201ENST00000228425 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
PPFIBP1-201ENST00000228425 SPRR2DP22532 72 aa2.27□□□□□ -2.05
PPFIBP1-201ENST00000228425 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
PPFIBP1-201ENST00000228425 MT2AP02795 61 aa2.25□□□□□ -2.05
PPFIBP1-201ENST00000228425 KRTAP9-6A0A140TA67 174 aa2.24□□□□□ -2.05
PPFIBP1-201ENST00000228425 KRTAP19-5Q3LI72 72 aa2.23□□□□□ -2.05
PPFIBP1-201ENST00000228425 KRTAP9-2Q9BYQ4 174 aa2.23□□□□□ -2.05
PPFIBP1-201ENST00000228425 KRTAP9-7A8MTY7 169 aa2.21□□□□□ -2.06
PPFIBP1-201ENST00000228425 LCE3BQ5TA77 95 aa2.21□□□□□ -2.06
PPFIBP1-201ENST00000228425 DSTQ03001 7570 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms