RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 LRP2P98164 4655 aa15.22■□□□□ 0.03
PABPN1-201ENST00000216727 J3QL48 77 aa15.21■□□□□ 0.03
PABPN1-201ENST00000216727 SEC61GP60059 68 aa15.16■□□□□ 0.02
PABPN1-201ENST00000216727 LPAP08519 4548 aa15.13■□□□□ 0.01
PABPN1-201ENST00000216727 UQCR11O14957 56 aa15.07■□□□□ 0
PABPN1-201ENST00000216727 SPATA8Q6RVD6 105 aa15□□□□□ -0.01
PABPN1-201ENST00000216727 KRTAP3-3Q9BYR6 98 aa14.99□□□□□ -0.01
PABPN1-201ENST00000216727 S4R3F8 94 aa14.97□□□□□ -0.01
PABPN1-201ENST00000216727 H1FX-AS1Q4G0G2 97 aa14.95□□□□□ -0.02
PABPN1-201ENST00000216727 SEC61BP60468 96 aaKnown RBP14.94□□□□□ -0.02
PABPN1-201ENST00000216727 MIR22HGQ0VDD5 57 aa14.94□□□□□ -0.02
PABPN1-201ENST00000216727 RBM12B-AS1Q9P1G2 102 aa14.91□□□□□ -0.02
PABPN1-201ENST00000216727 PMAIP1Q13794 54 aa14.87□□□□□ -0.03
PABPN1-201ENST00000216727 A0A1B0GU33 70 aa14.79□□□□□ -0.04
PABPN1-201ENST00000216727 A6NN06 94 aa14.72□□□□□ -0.05
PABPN1-201ENST00000216727 H0YAA0 97 aa14.67□□□□□ -0.06
PABPN1-201ENST00000216727 MUC17Q685J3 4493 aa14.65□□□□□ -0.06
PABPN1-201ENST00000216727 KRTAP10-6P60371 365 aaPredicted RBP14.64□□□□□ -0.07
PABPN1-201ENST00000216727 KRTAP4-1Q9BYQ7 146 aa14.61□□□□□ -0.07
PABPN1-201ENST00000216727 KRTAP3-2Q9BYR7 98 aa14.6□□□□□ -0.07
PABPN1-201ENST00000216727 CSAG1Q6PB30 78 aa14.57□□□□□ -0.08
PABPN1-201ENST00000216727 PCLOQ9Y6V0 5065 aa14.55□□□□□ -0.08
PABPN1-201ENST00000216727 KTN1-AS1Q86SY8 53 aa14.42□□□□□ -0.1
PABPN1-201ENST00000216727 HERC1Q15751 4861 aa14.42□□□□□ -0.1
PABPN1-201ENST00000216727 P0C880 135 aa14.41□□□□□ -0.1
PABPN1-201ENST00000216727 ADM2Q7Z4H4 148 aa14.39□□□□□ -0.11
PABPN1-201ENST00000216727 HMCN2Q8NDA2 5059 aa14.37□□□□□ -0.11
PABPN1-201ENST00000216727 KRTAP19-2Q3LHN2 52 aa14.35□□□□□ -0.11
PABPN1-201ENST00000216727 KRTAP13-4Q3LI77 160 aa14.31□□□□□ -0.12
PABPN1-201ENST00000216727 K7ERS5 55 aa14.14□□□□□ -0.15
PABPN1-201ENST00000216727 MUC2Q02817 5179 aa14.11□□□□□ -0.15
PABPN1-201ENST00000216727 M0QZ58 72 aa14.08□□□□□ -0.15
PABPN1-201ENST00000216727 A0A0D9SG42 100 aa14.07□□□□□ -0.16
PABPN1-201ENST00000216727 FLGP20930 4061 aaPredicted RBP14.01□□□□□ -0.17
PABPN1-201ENST00000216727 PRAC1Q96KF2 57 aa13.86□□□□□ -0.19
PABPN1-201ENST00000216727 R4GN34 69 aa13.83□□□□□ -0.2
PABPN1-201ENST00000216727 KRTAP12-1P59990 96 aa13.79□□□□□ -0.2
PABPN1-201ENST00000216727 KRTAP12-2P59991 146 aa13.79□□□□□ -0.2
PABPN1-201ENST00000216727 LCE2CQ5TA81 110 aa13.76□□□□□ -0.21
PABPN1-201ENST00000216727 LORP23490 312 aaPredicted RBP13.74□□□□□ -0.21
PABPN1-201ENST00000216727 SPINT4Q6UDR6 99 aa13.69□□□□□ -0.22
PABPN1-201ENST00000216727 ROMO1P60602 79 aa13.68□□□□□ -0.22
PABPN1-201ENST00000216727 UBR4Q5T4S7 5183 aa13.64□□□□□ -0.23
PABPN1-201ENST00000216727 RNF213Q63HN8 5207 aa13.64□□□□□ -0.23
PABPN1-201ENST00000216727 LINC01554Q52M75 96 aa13.6□□□□□ -0.23
PABPN1-201ENST00000216727 FAT4Q6V0I7 4981 aa13.5□□□□□ -0.25
PABPN1-201ENST00000216727 CRIPTQ9P021 101 aa13.49□□□□□ -0.25
PABPN1-201ENST00000216727 MT1HP80294 61 aa13.44□□□□□ -0.26
PABPN1-201ENST00000216727 KRTAP25-1Q3LHN0 102 aa13.42□□□□□ -0.26
PABPN1-201ENST00000216727 M0R2T5 61 aa13.34□□□□□ -0.27
PABPN1-201ENST00000216727 SPRR2GQ9BYE4 73 aa13.09□□□□□ -0.31
PABPN1-201ENST00000216727 MT2AP02795 61 aa13.05□□□□□ -0.32
PABPN1-201ENST00000216727 KRTAP9-8Q9BYQ0 159 aa13.04□□□□□ -0.32
PABPN1-201ENST00000216727 C10orf95Q9H7T3 257 aa13.03□□□□□ -0.32
PABPN1-201ENST00000216727 CAMK2N1Q7Z7J9 78 aa13.01□□□□□ -0.33
PABPN1-201ENST00000216727 KRTAP19-1Q8IUB9 90 aa13□□□□□ -0.33
PABPN1-201ENST00000216727 MT1FP04733 61 aa12.99□□□□□ -0.33
PABPN1-201ENST00000216727 KRTAP10-10P60014 251 aa12.95□□□□□ -0.34
PABPN1-201ENST00000216727 PLAC4Q8WY50 150 aa12.76□□□□□ -0.37
PABPN1-201ENST00000216727 KRTAP19-8Q3LI54 63 aa12.64□□□□□ -0.39
PABPN1-201ENST00000216727 KRTAP9-3Q9BYQ3 159 aa12.54□□□□□ -0.4
PABPN1-201ENST00000216727 TNP1P09430 55 aa12.49□□□□□ -0.41
PABPN1-201ENST00000216727 LCE2AQ5TA79 106 aaPredicted RBP12.49□□□□□ -0.41
PABPN1-201ENST00000216727 PP632Q6XCG6 107 aa12.46□□□□□ -0.41
PABPN1-201ENST00000216727 MT1BP07438 61 aa12.43□□□□□ -0.42
PABPN1-201ENST00000216727 KRTAP23-1A1A580 65 aa12.32□□□□□ -0.44
PABPN1-201ENST00000216727 KRTAP10-5P60370 271 aa12.16□□□□□ -0.46
PABPN1-201ENST00000216727 MT1XP80297 61 aa12.16□□□□□ -0.46
PABPN1-201ENST00000216727 LCE2BO14633 110 aa12.09□□□□□ -0.47
PABPN1-201ENST00000216727 KRTAP15-1Q3LI76 137 aa12.04□□□□□ -0.48
PABPN1-201ENST00000216727 PRO2289Q9P1D8 64 aa11.93□□□□□ -0.5
PABPN1-201ENST00000216727 LCE3AQ5TA76 89 aa11.86□□□□□ -0.51
PABPN1-201ENST00000216727 KRTAP10-12P60413 245 aa11.71□□□□□ -0.53
PABPN1-201ENST00000216727 KRTAP10-7P60409 375 aaPredicted RBP11.7□□□□□ -0.54
PABPN1-201ENST00000216727 KRTAP8-1Q8IUC2 63 aa11.68□□□□□ -0.54
PABPN1-201ENST00000216727 USH2AO75445 5202 aa11.67□□□□□ -0.54
PABPN1-201ENST00000216727 KRTAP12-3P60328 96 aa11.38□□□□□ -0.59
PABPN1-201ENST00000216727 NDUFAF8A1L188 74 aa11.34□□□□□ -0.59
PABPN1-201ENST00000216727 H3BS24 57 aa11.32□□□□□ -0.6
PABPN1-201ENST00000216727 SPRR5A0A1B0GTR4 108 aa11.31□□□□□ -0.6
PABPN1-201ENST00000216727 SSPOA2VEC9 5147 aa11.26□□□□□ -0.61
PABPN1-201ENST00000216727 KRTAP19-6Q3LI70 58 aa11.2□□□□□ -0.62
PABPN1-201ENST00000216727 LUZP6Q538Z0 58 aa11.16□□□□□ -0.62
PABPN1-201ENST00000216727 KRTAP19-5Q3LI72 72 aa11.11□□□□□ -0.63
PABPN1-201ENST00000216727 KRTAP4-8A0A0G2JLE6 195 aa11.1□□□□□ -0.63
PABPN1-201ENST00000216727 LCE2DQ5TA82 110 aaPredicted RBP11.1□□□□□ -0.63
PABPN1-201ENST00000216727 KRTAP4-8Q9BYQ9 185 aa11.1□□□□□ -0.63
PABPN1-201ENST00000216727 KMT2DO14686 5537 aa11.05□□□□□ -0.64
PABPN1-201ENST00000216727 FSIP2Q5CZC0 6907 aa10.91□□□□□ -0.66
PABPN1-201ENST00000216727 KRTAP19-7Q3SYF9 63 aa10.85□□□□□ -0.67
PABPN1-201ENST00000216727 LCE3CQ5T5A8 94 aa10.68□□□□□ -0.7
PABPN1-201ENST00000216727 MT1EP04732 61 aa10.62□□□□□ -0.71
PABPN1-201ENST00000216727 FCGBPQ9Y6R7 5405 aaPredicted RBP10.6□□□□□ -0.71
PABPN1-201ENST00000216727 KRTAP19-4Q3LI73 84 aa10.58□□□□□ -0.72
PABPN1-201ENST00000216727 MT1LQ93083 61 aa10.49□□□□□ -0.73
PABPN1-201ENST00000216727 KRTAP9-2Q9BYQ4 174 aa10.34□□□□□ -0.75
PABPN1-201ENST00000216727 KRTAP4-7Q9BYR0 210 aa10.26□□□□□ -0.77
PABPN1-201ENST00000216727 KRTAP9-6A8MVA2 160 aa10.16□□□□□ -0.78
PABPN1-201ENST00000216727 KRTAP19-3Q7Z4W3 81 aa10.09□□□□□ -0.79
PABPN1-201ENST00000216727 CRCT1Q9UGL9 99 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms