RNA–Protein interactions for RNA: ENST00000194530.7

STRADB-201, Transcript of STE20-related kinase adaptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STRADB, Length 2,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-201ENST00000194530 KRTAP3-3Q9BYR6 98 aa10.65□□□□□ -0.7
STRADB-201ENST00000194530 HSPG2P98160 4391 aa10.65□□□□□ -0.7
STRADB-201ENST00000194530 LINC01554Q52M75 96 aa10.64□□□□□ -0.71
STRADB-201ENST00000194530 K7ERS5 55 aa10.6□□□□□ -0.71
STRADB-201ENST00000194530 S4R3F8 94 aa10.59□□□□□ -0.71
STRADB-201ENST00000194530 DMBT1Q9UGM3 2413 aaPredicted RBP10.57□□□□□ -0.72
STRADB-201ENST00000194530 KRTAP10-6P60371 365 aaPredicted RBP10.56□□□□□ -0.72
STRADB-201ENST00000194530 KRTAP17-1Q9BYP8 105 aa10.55□□□□□ -0.72
STRADB-201ENST00000194530 MT1HL1P0DM35 61 aa10.54□□□□□ -0.72
STRADB-201ENST00000194530 RYR1P21817 5038 aa10.51□□□□□ -0.73
STRADB-201ENST00000194530 KRTAP3-2Q9BYR7 98 aa10.5□□□□□ -0.73
STRADB-201ENST00000194530 KRTAP25-1Q3LHN0 102 aa10.43□□□□□ -0.74
STRADB-201ENST00000194530 KRTAP13-4Q3LI77 160 aa10.41□□□□□ -0.74
STRADB-201ENST00000194530 MYCBP2O75592 4640 aa10.38□□□□□ -0.75
STRADB-201ENST00000194530 RYR3Q15413 4870 aa10.37□□□□□ -0.75
STRADB-201ENST00000194530 TPRXLQ17RH7 258 aa10.36□□□□□ -0.75
STRADB-201ENST00000194530 A0A0D9SG42 100 aa10.34□□□□□ -0.75
STRADB-201ENST00000194530 P0C880 135 aa10.34□□□□□ -0.75
STRADB-201ENST00000194530 ROMO1P60602 79 aa10.32□□□□□ -0.76
STRADB-201ENST00000194530 KIAA1109Q2LD37 5005 aa10.28□□□□□ -0.76
STRADB-201ENST00000194530 CRIPTQ9P021 101 aa10.21□□□□□ -0.78
STRADB-201ENST00000194530 LPAP08519 4548 aa10.12□□□□□ -0.79
STRADB-201ENST00000194530 LRP2P98164 4655 aa10.12□□□□□ -0.79
STRADB-201ENST00000194530 M0QZ58 72 aa10.1□□□□□ -0.79
STRADB-201ENST00000194530 KRTAP12-2P59991 146 aa10.09□□□□□ -0.79
STRADB-201ENST00000194530 KRTAP12-1P59990 96 aa10.05□□□□□ -0.8
STRADB-201ENST00000194530 SPINT4Q6UDR6 99 aa10.02□□□□□ -0.81
STRADB-201ENST00000194530 KRTAP4-5Q9BYR2 181 aa10.02□□□□□ -0.81
STRADB-201ENST00000194530 SEC61BP60468 96 aaKnown RBP9.99□□□□□ -0.81
STRADB-201ENST00000194530 EPPK1P58107 5090 aaKnown RBP9.99□□□□□ -0.81
STRADB-201ENST00000194530 ABCA13Q86UQ4 5058 aa9.9□□□□□ -0.83
STRADB-201ENST00000194530 C10orf95Q9H7T3 257 aa9.87□□□□□ -0.83
STRADB-201ENST00000194530 R4GN34 69 aa9.82□□□□□ -0.84
STRADB-201ENST00000194530 J3QL48 77 aa9.8□□□□□ -0.84
STRADB-201ENST00000194530 KRTAP4-1Q9BYQ7 146 aa9.77□□□□□ -0.84
STRADB-201ENST00000194530 MUC17Q685J3 4493 aa9.76□□□□□ -0.85
STRADB-201ENST00000194530 LORP23490 312 aaPredicted RBP9.65□□□□□ -0.87
STRADB-201ENST00000194530 KRTAP19-2Q3LHN2 52 aa9.63□□□□□ -0.87
STRADB-201ENST00000194530 H3BS24 57 aa9.57□□□□□ -0.88
STRADB-201ENST00000194530 HERC2O95714 4834 aa9.49□□□□□ -0.89
STRADB-201ENST00000194530 KRTAP15-1Q3LI76 137 aa9.49□□□□□ -0.89
STRADB-201ENST00000194530 CAMK2N1Q7Z7J9 78 aa9.32□□□□□ -0.92
STRADB-201ENST00000194530 BIRC6Q9NR09 4857 aa9.28□□□□□ -0.92
STRADB-201ENST00000194530 FLGP20930 4061 aaPredicted RBP9.26□□□□□ -0.93
STRADB-201ENST00000194530 NDUFAF8A1L188 74 aa9.2□□□□□ -0.94
STRADB-201ENST00000194530 PP632Q6XCG6 107 aa9.2□□□□□ -0.94
STRADB-201ENST00000194530 MUC2Q02817 5179 aa9.17□□□□□ -0.94
STRADB-201ENST00000194530 PLAC4Q8WY50 150 aa9.13□□□□□ -0.95
STRADB-201ENST00000194530 HERC1Q15751 4861 aa9.06□□□□□ -0.96
STRADB-201ENST00000194530 LCE2CQ5TA81 110 aa9.05□□□□□ -0.96
STRADB-201ENST00000194530 HMCN2Q8NDA2 5059 aa9□□□□□ -0.97
STRADB-201ENST00000194530 TNP1P09430 55 aa8.99□□□□□ -0.97
STRADB-201ENST00000194530 KRTAP23-1A1A580 65 aa8.93□□□□□ -0.98
STRADB-201ENST00000194530 PCLOQ9Y6V0 5065 aa8.92□□□□□ -0.98
STRADB-201ENST00000194530 SPRR2GQ9BYE4 73 aa8.92□□□□□ -0.98
STRADB-201ENST00000194530 M0R2T5 61 aa8.86□□□□□ -0.99
STRADB-201ENST00000194530 KRTAP19-1Q8IUB9 90 aa8.84□□□□□ -0.99
STRADB-201ENST00000194530 MT1HP80294 61 aa8.81□□□□□ -1
STRADB-201ENST00000194530 FAT4Q6V0I7 4981 aa8.73□□□□□ -1.01
STRADB-201ENST00000194530 LUZP6Q538Z0 58 aa8.72□□□□□ -1.01
STRADB-201ENST00000194530 KRTAP10-10P60014 251 aa8.68□□□□□ -1.02
STRADB-201ENST00000194530 MT2AP02795 61 aa8.68□□□□□ -1.02
STRADB-201ENST00000194530 MT1FP04733 61 aa8.66□□□□□ -1.02
STRADB-201ENST00000194530 KRTAP9-8Q9BYQ0 159 aa8.62□□□□□ -1.03
STRADB-201ENST00000194530 RNF213Q63HN8 5207 aa8.6□□□□□ -1.03
STRADB-201ENST00000194530 KRTAP19-8Q3LI54 63 aa8.54□□□□□ -1.04
STRADB-201ENST00000194530 SPRR5A0A1B0GTR4 108 aa8.52□□□□□ -1.05
STRADB-201ENST00000194530 UBR4Q5T4S7 5183 aa8.48□□□□□ -1.05
STRADB-201ENST00000194530 LCE3AQ5TA76 89 aa8.47□□□□□ -1.05
STRADB-201ENST00000194530 MT1BP07438 61 aa8.38□□□□□ -1.07
STRADB-201ENST00000194530 KRTAP10-5P60370 271 aa8.34□□□□□ -1.07
STRADB-201ENST00000194530 MT1XP80297 61 aa8.32□□□□□ -1.08
STRADB-201ENST00000194530 KRTAP8-1Q8IUC2 63 aa8.31□□□□□ -1.08
STRADB-201ENST00000194530 KRTAP9-3Q9BYQ3 159 aa8.27□□□□□ -1.09
STRADB-201ENST00000194530 A0A0A0MQY5 61 aa8.24□□□□□ -1.09
STRADB-201ENST00000194530 KRTAP10-12P60413 245 aa8.17□□□□□ -1.1
STRADB-201ENST00000194530 KRTAP12-3P60328 96 aa8.09□□□□□ -1.11
STRADB-201ENST00000194530 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
STRADB-201ENST00000194530 KRTAP10-7P60409 375 aaPredicted RBP8.06□□□□□ -1.12
STRADB-201ENST00000194530 LCE2BO14633 110 aa7.9□□□□□ -1.14
STRADB-201ENST00000194530 LCE2AQ5TA79 106 aaPredicted RBP7.78□□□□□ -1.16
STRADB-201ENST00000194530 KRTAP19-5Q3LI72 72 aa7.75□□□□□ -1.17
STRADB-201ENST00000194530 LCE3CQ5T5A8 94 aa7.63□□□□□ -1.19
STRADB-201ENST00000194530 KRTAP4-8A0A0G2JLE6 195 aa7.55□□□□□ -1.2
STRADB-201ENST00000194530 KRTAP4-8Q9BYQ9 185 aa7.55□□□□□ -1.2
STRADB-201ENST00000194530 USH2AO75445 5202 aa7.51□□□□□ -1.21
STRADB-201ENST00000194530 INE1O15225 51 aa7.5□□□□□ -1.21
STRADB-201ENST00000194530 KMT2DO14686 5537 aa7.41□□□□□ -1.22
STRADB-201ENST00000194530 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
STRADB-201ENST00000194530 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
STRADB-201ENST00000194530 KRTAP9-6A8MVA2 160 aa7.29□□□□□ -1.24
STRADB-201ENST00000194530 MT1EP04732 61 aa7.21□□□□□ -1.25
STRADB-201ENST00000194530 MT1LQ93083 61 aa7.21□□□□□ -1.26
STRADB-201ENST00000194530 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
STRADB-201ENST00000194530 KRTAP19-6Q3LI70 58 aa7.15□□□□□ -1.26
STRADB-201ENST00000194530 SSPOA2VEC9 5147 aa7.15□□□□□ -1.26
STRADB-201ENST00000194530 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
STRADB-201ENST00000194530 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
STRADB-201ENST00000194530 KRTAP2-1Q9BYU5 128 aa7.08□□□□□ -1.28
STRADB-201ENST00000194530 LCE2DQ5TA82 110 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms