RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 FRAS1Q86XX4 4008 aa6.49□□□□□ -1.37
TSPAN9-201ENST00000011898 FAT2Q9NYQ8 4349 aa6.48□□□□□ -1.37
TSPAN9-201ENST00000011898 KRTAP13-3Q3SY46 172 aa6.47□□□□□ -1.37
TSPAN9-201ENST00000011898 KMT2CQ8NEZ4 4911 aaKnown RBP6.47□□□□□ -1.37
TSPAN9-201ENST00000011898 DYNC1H1Q14204 4646 aaKnown RBP6.46□□□□□ -1.38
TSPAN9-201ENST00000011898 DNAH5Q8TE73 4624 aa6.46□□□□□ -1.38
TSPAN9-201ENST00000011898 HECTD4Q9Y4D8 3996 aa6.45□□□□□ -1.38
TSPAN9-201ENST00000011898 DNAH8Q96JB1 4490 aa6.44□□□□□ -1.38
TSPAN9-201ENST00000011898 LRP1BQ9NZR2 4599 aa6.42□□□□□ -1.38
TSPAN9-201ENST00000011898 PKD1P98161 4303 aa6.41□□□□□ -1.38
TSPAN9-201ENST00000011898 KRTAP10-4P60372 401 aaPredicted RBP6.39□□□□□ -1.39
TSPAN9-201ENST00000011898 KRTAP10-8P60410 259 aa6.39□□□□□ -1.39
TSPAN9-201ENST00000011898 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
TSPAN9-201ENST00000011898 RYR3Q15413 4870 aa6.35□□□□□ -1.39
TSPAN9-201ENST00000011898 APOBP04114 4563 aaKnown RBP6.3□□□□□ -1.4
TSPAN9-201ENST00000011898 PKHD1P08F94 4074 aa6.3□□□□□ -1.4
TSPAN9-201ENST00000011898 XP32Q5T750 250 aa6.28□□□□□ -1.4
TSPAN9-201ENST00000011898 RYR1P21817 5038 aa6.24□□□□□ -1.41
TSPAN9-201ENST00000011898 PP632Q6XCG6 107 aa6.21□□□□□ -1.42
TSPAN9-201ENST00000011898 FAT1Q14517 4588 aa6.21□□□□□ -1.42
TSPAN9-201ENST00000011898 KRTAP4-5Q9BYR2 181 aa6.2□□□□□ -1.42
TSPAN9-201ENST00000011898 TNP1P09430 55 aa6.19□□□□□ -1.42
TSPAN9-201ENST00000011898 VPS13BQ7Z7G8 4022 aa6.19□□□□□ -1.42
TSPAN9-201ENST00000011898 KIAA1109Q2LD37 5005 aa6.18□□□□□ -1.42
TSPAN9-201ENST00000011898 HSPG2P98160 4391 aa6.17□□□□□ -1.42
TSPAN9-201ENST00000011898 BIRC6Q9NR09 4857 aa6.17□□□□□ -1.42
TSPAN9-201ENST00000011898 KRTAP17-1Q9BYP8 105 aa6.16□□□□□ -1.42
TSPAN9-201ENST00000011898 EPPK1P58107 5090 aaKnown RBP6.16□□□□□ -1.42
TSPAN9-201ENST00000011898 MT1HL1P0DM35 61 aa6.15□□□□□ -1.43
TSPAN9-201ENST00000011898 KRTAP12-2P59991 146 aa6.13□□□□□ -1.43
TSPAN9-201ENST00000011898 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
TSPAN9-201ENST00000011898 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
TSPAN9-201ENST00000011898 PKHD1L1Q86WI1 4243 aa6.05□□□□□ -1.44
TSPAN9-201ENST00000011898 KRTAP12-1P59990 96 aa6.01□□□□□ -1.45
TSPAN9-201ENST00000011898 HERC2O95714 4834 aa5.99□□□□□ -1.45
TSPAN9-201ENST00000011898 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
TSPAN9-201ENST00000011898 FAT3Q8TDW7 4589 aa5.93□□□□□ -1.46
TSPAN9-201ENST00000011898 LRP1Q07954 4544 aaKnown RBP5.92□□□□□ -1.46
TSPAN9-201ENST00000011898 KRTAP10-6P60371 365 aaPredicted RBP5.9□□□□□ -1.47
TSPAN9-201ENST00000011898 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
TSPAN9-201ENST00000011898 ABCA13Q86UQ4 5058 aa5.86□□□□□ -1.47
TSPAN9-201ENST00000011898 TNXBP22105 4242 aa5.85□□□□□ -1.47
TSPAN9-201ENST00000011898 MYCBP2O75592 4640 aa5.84□□□□□ -1.47
TSPAN9-201ENST00000011898 KRTAP3-3Q9BYR6 98 aa5.77□□□□□ -1.49
TSPAN9-201ENST00000011898 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
TSPAN9-201ENST00000011898 PCLOQ9Y6V0 5065 aa5.72□□□□□ -1.49
TSPAN9-201ENST00000011898 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
TSPAN9-201ENST00000011898 INE1O15225 51 aa5.63□□□□□ -1.51
TSPAN9-201ENST00000011898 HERC1Q15751 4861 aa5.53□□□□□ -1.52
TSPAN9-201ENST00000011898 KRTAP4-1Q9BYQ7 146 aa5.48□□□□□ -1.53
TSPAN9-201ENST00000011898 LPAP08519 4548 aa5.47□□□□□ -1.53
TSPAN9-201ENST00000011898 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.54
TSPAN9-201ENST00000011898 LRP2P98164 4655 aa5.45□□□□□ -1.54
TSPAN9-201ENST00000011898 MUC17Q685J3 4493 aa5.4□□□□□ -1.54
TSPAN9-201ENST00000011898 LORP23490 312 aaPredicted RBP5.37□□□□□ -1.55
TSPAN9-201ENST00000011898 MT1HP80294 61 aa5.21□□□□□ -1.58
TSPAN9-201ENST00000011898 RNF213Q63HN8 5207 aa5.21□□□□□ -1.58
TSPAN9-201ENST00000011898 KRTAP19-2Q3LHN2 52 aa5.21□□□□□ -1.58
TSPAN9-201ENST00000011898 LCE2CQ5TA81 110 aa5.19□□□□□ -1.58
TSPAN9-201ENST00000011898 UBR4Q5T4S7 5183 aa5.17□□□□□ -1.58
TSPAN9-201ENST00000011898 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
TSPAN9-201ENST00000011898 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
TSPAN9-201ENST00000011898 FLGP20930 4061 aaPredicted RBP5.06□□□□□ -1.6
TSPAN9-201ENST00000011898 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
TSPAN9-201ENST00000011898 KRTAP10-12P60413 245 aa5.04□□□□□ -1.6
TSPAN9-201ENST00000011898 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
TSPAN9-201ENST00000011898 MUC2Q02817 5179 aa5.03□□□□□ -1.6
TSPAN9-201ENST00000011898 MT2AP02795 61 aa4.99□□□□□ -1.61
TSPAN9-201ENST00000011898 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
TSPAN9-201ENST00000011898 MT1FP04733 61 aa4.94□□□□□ -1.62
TSPAN9-201ENST00000011898 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
TSPAN9-201ENST00000011898 FSIP2Q5CZC0 6907 aa4.89□□□□□ -1.63
TSPAN9-201ENST00000011898 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
TSPAN9-201ENST00000011898 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
TSPAN9-201ENST00000011898 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
TSPAN9-201ENST00000011898 KRTAP19-1Q8IUB9 90 aa4.77□□□□□ -1.65
TSPAN9-201ENST00000011898 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
TSPAN9-201ENST00000011898 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
TSPAN9-201ENST00000011898 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
TSPAN9-201ENST00000011898 LCE2DQ5TA82 110 aaPredicted RBP4.65□□□□□ -1.66
TSPAN9-201ENST00000011898 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
TSPAN9-201ENST00000011898 LCE2BO14633 110 aa4.63□□□□□ -1.67
TSPAN9-201ENST00000011898 MT1BP07438 61 aa4.63□□□□□ -1.67
TSPAN9-201ENST00000011898 SPRR2FQ96RM1 72 aa4.6□□□□□ -1.67
TSPAN9-201ENST00000011898 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
TSPAN9-201ENST00000011898 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
TSPAN9-201ENST00000011898 KRTAP10-7P60409 375 aaPredicted RBP4.51□□□□□ -1.69
TSPAN9-201ENST00000011898 MT1XP80297 61 aa4.5□□□□□ -1.69
TSPAN9-201ENST00000011898 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
TSPAN9-201ENST00000011898 KRTAP19-6Q3LI70 58 aa4.44□□□□□ -1.7
TSPAN9-201ENST00000011898 USH2AO75445 5202 aa4.39□□□□□ -1.71
TSPAN9-201ENST00000011898 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
TSPAN9-201ENST00000011898 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
TSPAN9-201ENST00000011898 SPRR2EP22531 72 aa4.33□□□□□ -1.72
TSPAN9-201ENST00000011898 SPRR2BP35325 72 aa4.33□□□□□ -1.72
TSPAN9-201ENST00000011898 SPRR2AP35326 72 aa4.33□□□□□ -1.72
TSPAN9-201ENST00000011898 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
TSPAN9-201ENST00000011898 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
TSPAN9-201ENST00000011898 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
TSPAN9-201ENST00000011898 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms