RNA–Protein interactions for RNA: ENST00000000442.10

ESRRA-201, Transcript of estrogen related receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ESRRA, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-201ENST00000000442 LINC01554Q52M75 96 aa13.72□□□□□ -0.21
ESRRA-201ENST00000000442 RYR3Q15413 4870 aa13.71□□□□□ -0.21
ESRRA-201ENST00000000442 XP32Q5T750 250 aa13.67□□□□□ -0.22
ESRRA-201ENST00000000442 KRTAP17-1Q9BYP8 105 aa13.63□□□□□ -0.23
ESRRA-201ENST00000000442 KRTAP3-3Q9BYR6 98 aa13.63□□□□□ -0.23
ESRRA-201ENST00000000442 RYR1P21817 5038 aa13.6□□□□□ -0.23
ESRRA-201ENST00000000442 DMBT1Q9UGM3 2413 aaPredicted RBP13.55□□□□□ -0.24
ESRRA-201ENST00000000442 K7ERS5 55 aa13.55□□□□□ -0.24
ESRRA-201ENST00000000442 KRTAP10-6P60371 365 aaPredicted RBP13.53□□□□□ -0.24
ESRRA-201ENST00000000442 S4R3F8 94 aa13.51□□□□□ -0.25
ESRRA-201ENST00000000442 MT1HL1P0DM35 61 aa13.5□□□□□ -0.25
ESRRA-201ENST00000000442 MYCBP2O75592 4640 aa13.48□□□□□ -0.25
ESRRA-201ENST00000000442 KRTAP3-2Q9BYR7 98 aa13.43□□□□□ -0.26
ESRRA-201ENST00000000442 KRTAP25-1Q3LHN0 102 aa13.41□□□□□ -0.26
ESRRA-201ENST00000000442 KIAA1109Q2LD37 5005 aa13.41□□□□□ -0.26
ESRRA-201ENST00000000442 KRTAP13-4Q3LI77 160 aa13.37□□□□□ -0.27
ESRRA-201ENST00000000442 A0A0D9SG42 100 aa13.25□□□□□ -0.29
ESRRA-201ENST00000000442 P0C880 135 aa13.24□□□□□ -0.29
ESRRA-201ENST00000000442 ROMO1P60602 79 aa13.23□□□□□ -0.29
ESRRA-201ENST00000000442 EPPK1P58107 5090 aaKnown RBP13.22□□□□□ -0.29
ESRRA-201ENST00000000442 TPRXLQ17RH7 258 aa13.17□□□□□ -0.3
ESRRA-201ENST00000000442 CRIPTQ9P021 101 aa13.13□□□□□ -0.31
ESRRA-201ENST00000000442 LPAP08519 4548 aa13.11□□□□□ -0.31
ESRRA-201ENST00000000442 KRTAP4-5Q9BYR2 181 aa13.11□□□□□ -0.31
ESRRA-201ENST00000000442 LRP2P98164 4655 aa13.07□□□□□ -0.32
ESRRA-201ENST00000000442 KRTAP12-2P59991 146 aa12.94□□□□□ -0.34
ESRRA-201ENST00000000442 M0QZ58 72 aa12.88□□□□□ -0.35
ESRRA-201ENST00000000442 KRTAP12-1P59990 96 aa12.87□□□□□ -0.35
ESRRA-201ENST00000000442 J3QL48 77 aa12.82□□□□□ -0.36
ESRRA-201ENST00000000442 SPINT4Q6UDR6 99 aa12.82□□□□□ -0.36
ESRRA-201ENST00000000442 ABCA13Q86UQ4 5058 aa12.76□□□□□ -0.37
ESRRA-201ENST00000000442 SEC61BP60468 96 aaKnown RBP12.71□□□□□ -0.37
ESRRA-201ENST00000000442 C10orf95Q9H7T3 257 aa12.7□□□□□ -0.38
ESRRA-201ENST00000000442 MUC17Q685J3 4493 aa12.6□□□□□ -0.39
ESRRA-201ENST00000000442 R4GN34 69 aa12.53□□□□□ -0.4
ESRRA-201ENST00000000442 HERC2O95714 4834 aa12.47□□□□□ -0.41
ESRRA-201ENST00000000442 KRTAP4-1Q9BYQ7 146 aa12.45□□□□□ -0.42
ESRRA-201ENST00000000442 H3BS24 57 aa12.43□□□□□ -0.42
ESRRA-201ENST00000000442 BIRC6Q9NR09 4857 aa12.4□□□□□ -0.43
ESRRA-201ENST00000000442 LORP23490 312 aaPredicted RBP12.34□□□□□ -0.43
ESRRA-201ENST00000000442 KRTAP19-2Q3LHN2 52 aa12.28□□□□□ -0.44
ESRRA-201ENST00000000442 KRTAP15-1Q3LI76 137 aa12.23□□□□□ -0.45
ESRRA-201ENST00000000442 FLGP20930 4061 aaPredicted RBP11.95□□□□□ -0.5
ESRRA-201ENST00000000442 PCLOQ9Y6V0 5065 aa11.91□□□□□ -0.5
ESRRA-201ENST00000000442 CAMK2N1Q7Z7J9 78 aa11.89□□□□□ -0.51
ESRRA-201ENST00000000442 NDUFAF8A1L188 74 aa11.87□□□□□ -0.51
ESRRA-201ENST00000000442 MUC2Q02817 5179 aa11.85□□□□□ -0.51
ESRRA-201ENST00000000442 HMCN2Q8NDA2 5059 aa11.8□□□□□ -0.52
ESRRA-201ENST00000000442 HERC1Q15751 4861 aa11.79□□□□□ -0.52
ESRRA-201ENST00000000442 PP632Q6XCG6 107 aa11.75□□□□□ -0.53
ESRRA-201ENST00000000442 PLAC4Q8WY50 150 aa11.71□□□□□ -0.53
ESRRA-201ENST00000000442 LCE2CQ5TA81 110 aa11.58□□□□□ -0.56
ESRRA-201ENST00000000442 TNP1P09430 55 aa11.48□□□□□ -0.57
ESRRA-201ENST00000000442 KRTAP23-1A1A580 65 aa11.39□□□□□ -0.59
ESRRA-201ENST00000000442 SPRR2GQ9BYE4 73 aa11.37□□□□□ -0.59
ESRRA-201ENST00000000442 M0R2T5 61 aa11.36□□□□□ -0.59
ESRRA-201ENST00000000442 MT1HP80294 61 aa11.33□□□□□ -0.6
ESRRA-201ENST00000000442 FAT4Q6V0I7 4981 aa11.31□□□□□ -0.6
ESRRA-201ENST00000000442 KRTAP19-1Q8IUB9 90 aa11.27□□□□□ -0.61
ESRRA-201ENST00000000442 RNF213Q63HN8 5207 aa11.22□□□□□ -0.61
ESRRA-201ENST00000000442 UBR4Q5T4S7 5183 aa11.21□□□□□ -0.61
ESRRA-201ENST00000000442 LUZP6Q538Z0 58 aa11.17□□□□□ -0.62
ESRRA-201ENST00000000442 MT2AP02795 61 aa11.04□□□□□ -0.64
ESRRA-201ENST00000000442 MT1FP04733 61 aa11.03□□□□□ -0.64
ESRRA-201ENST00000000442 KRTAP10-10P60014 251 aa11.03□□□□□ -0.64
ESRRA-201ENST00000000442 KRTAP9-8Q9BYQ0 159 aa11□□□□□ -0.65
ESRRA-201ENST00000000442 SPRR5A0A1B0GTR4 108 aa10.95□□□□□ -0.66
ESRRA-201ENST00000000442 KRTAP19-8Q3LI54 63 aa10.86□□□□□ -0.67
ESRRA-201ENST00000000442 LCE3AQ5TA76 89 aa10.84□□□□□ -0.67
ESRRA-201ENST00000000442 MT1BP07438 61 aa10.69□□□□□ -0.7
ESRRA-201ENST00000000442 KRTAP10-5P60370 271 aa10.64□□□□□ -0.71
ESRRA-201ENST00000000442 MT1XP80297 61 aa10.62□□□□□ -0.71
ESRRA-201ENST00000000442 KRTAP8-1Q8IUC2 63 aa10.61□□□□□ -0.71
ESRRA-201ENST00000000442 A0A0A0MQY5 61 aa10.6□□□□□ -0.71
ESRRA-201ENST00000000442 KRTAP9-3Q9BYQ3 159 aa10.56□□□□□ -0.72
ESRRA-201ENST00000000442 KRTAP10-12P60413 245 aa10.43□□□□□ -0.74
ESRRA-201ENST00000000442 LCE2AQ5TA79 106 aaPredicted RBP10.34□□□□□ -0.75
ESRRA-201ENST00000000442 KRTAP12-3P60328 96 aa10.34□□□□□ -0.75
ESRRA-201ENST00000000442 KRTAP10-7P60409 375 aaPredicted RBP10.3□□□□□ -0.76
ESRRA-201ENST00000000442 PRO2289Q9P1D8 64 aa10.26□□□□□ -0.77
ESRRA-201ENST00000000442 LCE2BO14633 110 aa10.17□□□□□ -0.78
ESRRA-201ENST00000000442 KRTAP19-5Q3LI72 72 aa9.88□□□□□ -0.83
ESRRA-201ENST00000000442 LCE3CQ5T5A8 94 aa9.74□□□□□ -0.85
ESRRA-201ENST00000000442 USH2AO75445 5202 aa9.73□□□□□ -0.85
ESRRA-201ENST00000000442 INE1O15225 51 aa9.64□□□□□ -0.87
ESRRA-201ENST00000000442 KRTAP4-8A0A0G2JLE6 195 aa9.63□□□□□ -0.87
ESRRA-201ENST00000000442 KRTAP4-8Q9BYQ9 185 aa9.63□□□□□ -0.87
ESRRA-201ENST00000000442 KMT2DO14686 5537 aa9.62□□□□□ -0.87
ESRRA-201ENST00000000442 KRTAP19-7Q3SYF9 63 aa9.46□□□□□ -0.89
ESRRA-201ENST00000000442 KRTAP9-6A8MVA2 160 aa9.35□□□□□ -0.91
ESRRA-201ENST00000000442 KRTAP19-6Q3LI70 58 aa9.35□□□□□ -0.91
ESRRA-201ENST00000000442 KRTAP19-4Q3LI73 84 aa9.31□□□□□ -0.92
ESRRA-201ENST00000000442 SSPOA2VEC9 5147 aa9.3□□□□□ -0.92
ESRRA-201ENST00000000442 KRTAP4-7Q9BYR0 210 aa9.21□□□□□ -0.94
ESRRA-201ENST00000000442 MT1EP04732 61 aa9.2□□□□□ -0.94
ESRRA-201ENST00000000442 MT1LQ93083 61 aa9.2□□□□□ -0.94
ESRRA-201ENST00000000442 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
ESRRA-201ENST00000000442 KRTAP2-3P0C7H8 128 aa9.08□□□□□ -0.96
ESRRA-201ENST00000000442 KRTAP2-4Q9BYR9 128 aa9.08□□□□□ -0.96
ESRRA-201ENST00000000442 KRTAP2-1Q9BYU5 128 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms