RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Trpt1Q8K3A2 249 aa12.14□□□□□ -0.47
Trim39-203ENSMUST00000113706 Obox8V9GWY9 217 aa12.13□□□□□ -0.47
Trim39-203ENSMUST00000113706 Ccl17F6R5P4 103 aa12.13□□□□□ -0.47
Trim39-203ENSMUST00000113706 5930422O12RikQ8C4Y4 123 aa12.13□□□□□ -0.47
Trim39-203ENSMUST00000113706 Plcxd2B2RXA1 340 aa12.13□□□□□ -0.47
Trim39-203ENSMUST00000113706 Gm5941Q497P9 117 aa12.13□□□□□ -0.47
Trim39-203ENSMUST00000113706 Uqcc3Q8K2T4 89 aa12.13□□□□□ -0.47
Trim39-203ENSMUST00000113706 Gcn1E9PVA8 2671 aaKnown RBP12.12□□□□□ -0.47
Trim39-203ENSMUST00000113706 Ighv1-53A0A075B5W3 117 aa12.12□□□□□ -0.47
Trim39-203ENSMUST00000113706 Gm10188Q3V432 135 aa12.12□□□□□ -0.47
Trim39-203ENSMUST00000113706 Srsf12Q8C8K3 266 aa12.12□□□□□ -0.47
Trim39-203ENSMUST00000113706 UrahQ9CRB3 118 aa12.12□□□□□ -0.47
Trim39-203ENSMUST00000113706 Gm33815A0A087WNV3 176 aa12.12□□□□□ -0.47
Trim39-203ENSMUST00000113706 Gm29644A0A087WPG2 191 aa12.12□□□□□ -0.47
Trim39-203ENSMUST00000113706 Gm5148Q8BGG2 154 aa12.12□□□□□ -0.47
Trim39-203ENSMUST00000113706 Cdpf1Q8R3A2 119 aa12.12□□□□□ -0.47
Trim39-203ENSMUST00000113706 Trav12-3A0A075B648 115 aa12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 Tmem141A2AJB2 108 aa12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 Odf3l1Q810P2 275 aa12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 Tmem177Q8BPE4 311 aa12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 Leprotl1Q9CQ74 131 aa12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 Znf580Q9DB38 172 aa12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 LrbaQ9ESE1 2856 aa12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 Prima1Q810F0 153 aa12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 4930474N05RikQ8BVR5 218 aa12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 Gm10118Q8C8J5 116 aa12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 Vmn1r202Q8R259 302 aa12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 FlnaQ8BTM8 2647 aaKnown RBP12.11□□□□□ -0.47
Trim39-203ENSMUST00000113706 Pdzd2E9Q1M1 2796 aa12.1□□□□□ -0.47
Trim39-203ENSMUST00000113706 Gm5089A1L3C8 106 aa12.1□□□□□ -0.47
Trim39-203ENSMUST00000113706 Mrpl32Q9DCI9 187 aaKnown RBP12.1□□□□□ -0.47
Trim39-203ENSMUST00000113706 Olfr1262Q8VGN2 304 aa12.1□□□□□ -0.47
Trim39-203ENSMUST00000113706 Tcrg-V6A0A075B5Y8 134 aa12.09□□□□□ -0.47
Trim39-203ENSMUST00000113706 Tcrg-V4A0A0B4J1J8 138 aa12.09□□□□□ -0.47
Trim39-203ENSMUST00000113706 Trav7-5A0A0G2JFX6 112 aa12.09□□□□□ -0.47
Trim39-203ENSMUST00000113706 Hsbp1l1B2RXB2 72 aa12.09□□□□□ -0.47
Trim39-203ENSMUST00000113706 Gm5878E9PUB3 99 aa12.09□□□□□ -0.47
Trim39-203ENSMUST00000113706 Trav16nA0A075B634 117 aa12.09□□□□□ -0.47
Trim39-203ENSMUST00000113706 Igll1P20764 209 aa12.09□□□□□ -0.47
Trim39-203ENSMUST00000113706 Ccl24Q9JKC0 119 aa12.09□□□□□ -0.47
Trim39-203ENSMUST00000113706 Igkv4-71A0A0G2JEH0 117 aa12.09□□□□□ -0.47
Trim39-203ENSMUST00000113706 Itgb1bp1O35671 200 aa12.09□□□□□ -0.47
Trim39-203ENSMUST00000113706 Spink10Q8CAC8 162 aa12.09□□□□□ -0.47
Trim39-203ENSMUST00000113706 Ighv1-16A0A075B5U1 98 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Ighv1-80A0A075B5Y3 117 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Trav6-4A0A075B6B4 115 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Gosr1O88630 250 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Fabp4P04117 132 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Bri3P28662 125 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Ang3P97802 145 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Gm5105Q8C6Y9 112 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Olfr1199Q8VF94 310 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Sorl1O88307 2215 aaKnown RBP12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Igkv4-57-1A0A075B5M4 119 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 H2-DMb2Q31099 261 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Dpm3Q9D1Q4 92 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 Npc2Q9Z0J0 149 aa12.08□□□□□ -0.48
Trim39-203ENSMUST00000113706 MsmbO08540 113 aa12.07□□□□□ -0.48
Trim39-203ENSMUST00000113706 NpyP57774 97 aa12.07□□□□□ -0.48
Trim39-203ENSMUST00000113706 9130213A22RikQ3V3T2 120 aa12.07□□□□□ -0.48
Trim39-203ENSMUST00000113706 Trdv2-2Q5R1A4 116 aa12.07□□□□□ -0.48
Trim39-203ENSMUST00000113706 Megf10Q6DIB5 1147 aa12.07□□□□□ -0.48
Trim39-203ENSMUST00000113706 Rchy1Q9CR50 261 aa12.07□□□□□ -0.48
Trim39-203ENSMUST00000113706 Gm13030A2APQ6 143 aa12.07□□□□□ -0.48
Trim39-203ENSMUST00000113706 Tmem88bQ3TYP4 173 aa12.07□□□□□ -0.48
Trim39-203ENSMUST00000113706 BsnO88737 3942 aa12.07□□□□□ -0.48
Trim39-203ENSMUST00000113706 Igkv4-81A0A0G2JEY5 119 aa12.07□□□□□ -0.48
Trim39-203ENSMUST00000113706 Vmn1r1E9PVR6 306 aa12.06□□□□□ -0.48
Trim39-203ENSMUST00000113706 QrfpQ8CE23 124 aa12.06□□□□□ -0.48
Trim39-203ENSMUST00000113706 Hyls1Q9CXX0 307 aa12.06□□□□□ -0.48
Trim39-203ENSMUST00000113706 AhspQ9CY02 102 aa12.06□□□□□ -0.48
Trim39-203ENSMUST00000113706 Spata25Q9DA57 226 aa12.06□□□□□ -0.48
Trim39-203ENSMUST00000113706 Nf1Q04690 2841 aa12.06□□□□□ -0.48
Trim39-203ENSMUST00000113706 Sub1P11031 127 aaKnown RBP12.06□□□□□ -0.48
Trim39-203ENSMUST00000113706 Rnf24Q8BGI1 148 aa12.06□□□□□ -0.48
Trim39-203ENSMUST00000113706 Olfr1402Q8VET1 320 aa12.06□□□□□ -0.48
Trim39-203ENSMUST00000113706 Q9D7E4 109 aa12.06□□□□□ -0.48
Trim39-203ENSMUST00000113706 Vmn1r63Q9EPT1 300 aa12.06□□□□□ -0.48
Trim39-203ENSMUST00000113706 Zfp248Q640N4 576 aa12.05□□□□□ -0.48
Trim39-203ENSMUST00000113706 Nav3Q80TN7 2359 aa12.05□□□□□ -0.48
Trim39-203ENSMUST00000113706 Olfr975Q8VG91 310 aa12.05□□□□□ -0.48
Trim39-203ENSMUST00000113706 Mrpl53Q9D1H8 118 aaKnown RBP12.05□□□□□ -0.48
Trim39-203ENSMUST00000113706 BC067074F6RXI4 2391 aa12.04□□□□□ -0.48
Trim39-203ENSMUST00000113706 Q4KKZ1 196 aa12.04□□□□□ -0.48
Trim39-203ENSMUST00000113706 Spink2Q8BMY7 86 aa12.04□□□□□ -0.48
Trim39-203ENSMUST00000113706 Ifitm2Q99J93 144 aa12.04□□□□□ -0.48
Trim39-203ENSMUST00000113706 Ube2cQ9D1C1 179 aa12.04□□□□□ -0.48
Trim39-203ENSMUST00000113706 CubnQ9JLB4 3623 aa12.04□□□□□ -0.48
Trim39-203ENSMUST00000113706 Tmem262D3Z338 116 aa12.04□□□□□ -0.48
Trim39-203ENSMUST00000113706 P01791 123 aa12.04□□□□□ -0.48
Trim39-203ENSMUST00000113706 1810011H11RikE9PVZ2 95 aa12.03□□□□□ -0.48
Trim39-203ENSMUST00000113706 Cfc1P97766 202 aa12.03□□□□□ -0.48
Trim39-203ENSMUST00000113706 Olfr1431Q8VF59 312 aa12.03□□□□□ -0.48
Trim39-203ENSMUST00000113706 Ormdl3Q9CPZ6 153 aa12.03□□□□□ -0.48
Trim39-203ENSMUST00000113706 P01812 117 aa12.03□□□□□ -0.48
Trim39-203ENSMUST00000113706 Olfr761Q7TRJ0 323 aa12.03□□□□□ -0.48
Trim39-203ENSMUST00000113706 Bex1Q9R224 128 aa12.03□□□□□ -0.48
Trim39-203ENSMUST00000113706 P01736 120 aa12.03□□□□□ -0.48
Trim39-203ENSMUST00000113706 Nutf2P61971 127 aa12.03□□□□□ -0.48
Trim39-203ENSMUST00000113706 Odf1Q61999 247 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms