RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gm5105Q8C6Y9 112 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 NpbQ8K4P1 119 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 Egr1P08046 533 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 Ndufa4l2Q4FZG9 87 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 Crip3Q6Q6R3 243 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 Ube2tQ9CQ37 204 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 Q9CX25 107 aa9.99□□□□□ -0.81
Nup88-203ENSMUST00000108531 Zfp493E9Q1L8 384 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 PlnP61014 52 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Tmem88bQ3TYP4 173 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Q3UNZ8 350 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 FshbQ60687 130 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 TroQ6DIC6 2087 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Wfdc21Q8BTE6 63 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Fam24aQ8CF27 98 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Klk15Q8CGR4 254 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Wipf1Q8K1I7 493 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Dkk2Q9QYZ8 259 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Trank1Q8BV79 2999 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Tmem238lA0A1B0GS74 79 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Smim13E9Q942 88 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Lynx1P0DP60 116 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Cd24P24807 76 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Defb20Q30KP3 96 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Khdc1aQ3UWR2 166 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Vwc2lQ505H4 222 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Il22ra1Q80XZ4 581 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 E130116L18RikQ8BMV6 101 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Spink2Q8BMY7 86 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 Atp6v0e1Q9CQD8 81 aa9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 ManfQ9CXI5 179 aaKnown RBP9.98□□□□□ -0.81
Nup88-203ENSMUST00000108531 1520401A03RikA0A0J9YVH6 598 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Gm26727M0QWT1 121 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Tmem136Q3TYE7 245 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Snx22Q8C084 192 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Olfr498Q8VEW2 330 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Pgpep1lQ9CWB5 130 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Wfdc2Q9DAU7 174 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Dnajb12Q9QYI4 376 aaKnown RBP9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Bub3Q9WVA3 326 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Ighv1-23A0A0A6YVW3 117 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Defa9P50707 93 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Olfr1209Q3SXJ3 310 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Foxc2Q61850 494 aa9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Slc25a20Q9Z2Z6 301 aaKnown RBP9.97□□□□□ -0.81
Nup88-203ENSMUST00000108531 Igkv4-59A0A0B4J1I8 117 aa9.96□□□□□ -0.81
Nup88-203ENSMUST00000108531 Gm17359A0A0G2JEB7 487 aa9.96□□□□□ -0.81
Nup88-203ENSMUST00000108531 Gm15293D3YX02 93 aa9.96□□□□□ -0.81
Nup88-203ENSMUST00000108531 Vsig4F6TUL9 280 aa9.96□□□□□ -0.81
Nup88-203ENSMUST00000108531 Gng4P50153 75 aa9.96□□□□□ -0.81
Nup88-203ENSMUST00000108531 Defb30Q30KN4 75 aa9.96□□□□□ -0.81
Nup88-203ENSMUST00000108531 Hspe1Q64433 102 aaKnown RBP9.96□□□□□ -0.81
Nup88-203ENSMUST00000108531 Pxt1Q8K459 51 aa9.96□□□□□ -0.82
Nup88-203ENSMUST00000108531 Shisa9Q9CZN4 424 aa9.96□□□□□ -0.82
Nup88-203ENSMUST00000108531 Cnn3Q9DAW9 330 aaKnown RBP9.96□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gnb1lQ9EQ15 326 aa9.96□□□□□ -0.82
Nup88-203ENSMUST00000108531 OtorQ9JIE3 128 aa9.96□□□□□ -0.82
Nup88-203ENSMUST00000108531 Nav2E9Q842 2432 aa9.96□□□□□ -0.82
Nup88-203ENSMUST00000108531 Trav19A0A0B4J1K4 119 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Trav7-5A0A0G2JFX6 112 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gm28038F7BCN9 126 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Tnfrsf9P20334 256 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Msrb2Q78J03 175 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Zfp292Q9Z2U2 2698 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 DspE9Q557 2883 aaKnown RBP9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Ighv1-4A0A075B5T4 117 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Ighv1-53A0A075B5W3 117 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Trav16d-dv11A0A075B617 117 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Trav21-dv12A0A075B6C4 109 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gm5878E9PUB3 99 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gosr1O88630 250 aa9.95□□□□□ -0.82
Nup88-203ENSMUST00000108531 Sertad4A7DTG3 377 aa9.94□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gm9970F6ZED4 185 aa9.94□□□□□ -0.82
Nup88-203ENSMUST00000108531 Olfr311Q5NC59 308 aa9.94□□□□□ -0.82
Nup88-203ENSMUST00000108531 Adrb3P25962 400 aa9.94□□□□□ -0.82
Nup88-203ENSMUST00000108531 Odf3l1Q810P2 275 aa9.94□□□□□ -0.82
Nup88-203ENSMUST00000108531 Rbfox3Q8BIF2 374 aa9.94□□□□□ -0.82
Nup88-203ENSMUST00000108531 A130051J06RikQ8CAU1 227 aa9.94□□□□□ -0.82
Nup88-203ENSMUST00000108531 Igkv4-81A0A0G2JEY5 119 aa9.93□□□□□ -0.82
Nup88-203ENSMUST00000108531 Ly6lH3BJG9 140 aa9.93□□□□□ -0.82
Nup88-203ENSMUST00000108531 Tmem8bB1AWJ5 472 aa9.93□□□□□ -0.82
Nup88-203ENSMUST00000108531 1700056E22RikF7CNM6 234 aa9.93□□□□□ -0.82
Nup88-203ENSMUST00000108531 Ins1P01325 108 aa9.93□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gm94Q3V2D2 93 aa9.93□□□□□ -0.82
Nup88-203ENSMUST00000108531 TdhQ8K3F7 373 aa9.93□□□□□ -0.82
Nup88-203ENSMUST00000108531 TctaQ8VEA7 122 aa9.93□□□□□ -0.82
Nup88-203ENSMUST00000108531 Dppa2Q9CWH0 301 aa9.93□□□□□ -0.82
Nup88-203ENSMUST00000108531 RhohQ9D3G9 191 aa9.93□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gm26938S4R185 226 aa9.93□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gm17727E9Q4V7 109 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Tcl1b4P56844 120 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Spint3Q3UW09 88 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gm5464Q3UY29 175 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 F930015N05RikQ8C3A3 210 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Igsf23B2RTN2 239 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 P01801 115 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Thy1P01831 162 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Mtatp8P03930 67 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Gpx1P11352 201 aa9.92□□□□□ -0.82
Nup88-203ENSMUST00000108531 Ube2e1P52482 193 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms