RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Loxl1P97873 607 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Defb26Q30KN7 186 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Tal2Q62282 108 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 TdhQ8K3F7 373 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Ighv1-23A0A0A6YVW3 117 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Them7Q9DCP4 223 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Fxyd7P59648 80 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Casp8ap2Q9WUF3 1962 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 LeprotO89013 131 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Fhl4Q8CDC8 279 aa11.79□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Gm12169F2Z474 250 aa11.78□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Rspo1Q9Z132 265 aa11.78□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Igkv8-24A0A140T8P5 121 aa11.78□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Gm26727M0QWT1 121 aa11.78□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 PolP10400 120 aa11.78□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Tmem52Q9D702 196 aa11.78□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Trav4n-4A0A075B615 110 aa11.78□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Dazap2Q9DCP9 168 aa11.78□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Pkd1l3Q2EG98 2201 aa11.78□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Q8C708 225 aa11.77□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Med12lQ8BQM9 2157 aa11.77□□□□□ -0.52
Pcdh20-201ENSMUST00000061628 Gm10188Q3V432 135 aa11.77□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Vwc2lQ505H4 222 aa11.77□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Pom121l2Q5SW25 972 aa11.77□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 BC048502Q80Y74 154 aa11.77□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Gm9747Q810H1 104 aa11.77□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Ahctf1Q8CJF7 2243 aaKnown RBP11.77□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Trav14-2A0A075B694 121 aa11.77□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 C730034F03RikQ8BGL5 111 aa11.77□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Tcf24V9GWT9 166 aa11.77□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 P01630 113 aa11.77□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 P01786 117 aa11.77□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Znrd1Q791N7 123 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 KprpB2RUR4 657 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Brd3osA0A1B0GRB6 84 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 P01792 123 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Lgals4Q8K419 326 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Tmem14cQ9CQN6 114 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Fhl3Q9R059 289 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Akap6E9Q9K8 2307 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Plxna4Q80UG2 1893 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Gm37988J3QM41 62 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Lamtor3O88653 124 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Gm10604Q3V0X7 143 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Exph5Q0VAV2 1960 aa11.76□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Ifitm1Q9D103 106 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Igkv4-62A0A0G2JDW9 117 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Igkv3-9A0A140T8P4 119 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Gm20499D3Z4G5 72 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Socs3O35718 225 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Xcl1P47993 114 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Pcp4P63054 62 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Rnf183Q8QZS5 190 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Ube2wQ8VDW4 151 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Leap2Q91V13 76 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Gm9970F6ZED4 185 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Cela2aP05208 271 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 A930003A15RikQ3U552 87 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 SpinklQ8CEK3 90 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Cep250Q60952 2414 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Trav14-3A0A075B607 120 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 A0A286YE02 88 aa11.75□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Ss18l2Q9D174 77 aa11.74□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 PoleQ9WVF7 2283 aa11.74□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Ighv3-8A0A075B5T0 131 aa11.74□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Gm7102J3QQ10 178 aa11.74□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 ApomQ9Z1R3 190 aa11.74□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Igkv4-57-1A0A075B5M4 119 aa11.74□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Msrb3Q8BU85 253 aa11.74□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Slc25a48Q8BW66 306 aa11.74□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Foxi1Q922I5 372 aa11.74□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Tln2Q71LX4 2375 aa11.74□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Phf3B2RQG2 2025 aaKnown RBP11.73□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 GrnP28798 589 aaKnown RBP11.73□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Atp6v0bQ91V37 205 aa11.73□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Prok2Q9QXU7 128 aa11.73□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Ighv1-58A0A075B5W9 117 aa11.73□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Shisal2aA2A9G7 189 aa11.73□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 P01738 130 aa11.73□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Wdr81Q5ND34 1934 aa11.72□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 LitafQ9JLJ0 161 aa11.72□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Ighv1-64A0A075B5X3 117 aa11.72□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 4930447F04RikA2AFR2 126 aa11.72□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Sp5Q9JHX2 398 aa11.72□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 P06330 118 aa11.72□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Sdhaf1Q3U276 118 aa11.72□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Gm815Q3UWS2 115 aa11.72□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Tomm6Q9CQN3 74 aa11.72□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Lage3Q9CR70 148 aa11.72□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Dad1P61804 113 aa11.71□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Zic4Q61467 341 aa11.71□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Gtsf1Q9DAN6 167 aa11.71□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Fam216aQ9DB54 251 aa11.71□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Cox17P56394 63 aa11.71□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Cacna1gQ5SUF7 2381 aa11.71□□□□□ -0.53
Pcdh20-201ENSMUST00000061628 Gm15080A2BI02 449 aa11.71□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 P01789 122 aa11.71□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Fancd2osQ9D4K4 178 aa11.71□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Plxnd1Q3UH93 1925 aa11.71□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Obsl1D3YYU8 1804 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms