RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 P01756 117 aa9.74□□□□□ -0.85
Rnf4-201ENSMUST00000030992 P01757 117 aa9.74□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Fam208bQ5DTT3 2382 aa9.74□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Igkv4-81A0A0G2JEY5 119 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Omt2bD3YX29 119 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Gm5426J3QNM7 103 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 P01820 115 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Hist1h1tQ07133 208 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 5730522E02RikQ5SP45 163 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Cox7a2lQ61387 111 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Tmem160Q9D938 188 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Ighv1-23A0A0A6YVW3 117 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Gm45623A0A1B0GSF6 103 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Olfr1209Q3SXJ3 310 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 AY761185Q5ERI8 94 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Vsig8Q6P3A4 417 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 SNORCQ9CXL7 121 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Q9D131 166 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 NpbQ8K4P1 119 aa9.73□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Trav6n-6A0A075B6B2 114 aa9.72□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Hspe1Q64433 102 aaKnown RBP9.72□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Hif1anQ8BLR9 349 aa9.72□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Taf15Q8BQ46 557 aaKnown RBP9.72□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Gm10036E9PYL9 178 aaKnown RBP9.72□□□□□ -0.85
Rnf4-201ENSMUST00000030992 P01726 129 aa9.72□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Mfge8P21956 463 aaKnown RBP9.72□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Hyls1Q9CXX0 307 aa9.72□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Tcte2E9PY37 120 aa9.71□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Gm94Q3V2D2 93 aa9.71□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Odf1Q61999 247 aa9.71□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Q9DAA3 117 aa9.71□□□□□ -0.85
Rnf4-201ENSMUST00000030992 Gm37988J3QM41 62 aa9.71□□□□□ -0.86
Rnf4-201ENSMUST00000030992 NrgnP60761 78 aa9.71□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Malsu1Q9CWV0 228 aa9.71□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Ighv8-4A0A0A6YW26 117 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Edn2P22389 175 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Timm8bP62077 83 aaKnown RBP9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Q24JP4 165 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Ang6Q5GAN0 147 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 PdpnQ62011 172 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Fmc1Q9CR13 113 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Q9DAB9 146 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Znf580Q9DB38 172 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Trav19A0A0B4J1K4 119 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Ighv9-1A0A0B4J1P3 117 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Esp38A8R0X1 80 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Pla2g2aP31482 146 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 H2-DMb1P35737 261 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Samd10Q7TST3 202 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Tomm6Q9CQN3 74 aa9.7□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Igkv4-71A0A0G2JEH0 117 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Zfp109A0A0U1RPC5 652 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Smad7O35253 426 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Cox8bP48772 70 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Fhl1P97447 280 aaKnown RBP9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Spink2Q8BMY7 86 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 RhohQ9D3G9 191 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Tctex1d1Q9D5I4 173 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Arl3Q9WUL7 182 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Igkv4-70A0A0B4J1I5 116 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Olfr1437Q7TQR7 312 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 D630044L22RikQ8C701 164 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Rasl11bQ922H7 247 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Gm9195A0A140LHT4 2805 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Gm28038F7BCN9 126 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Tnfrsf9P20334 256 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Adrb3P25962 400 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Zfp248Q640N4 576 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Znf787Q8BIF9 381 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Dpm3Q9D1Q4 92 aa9.69□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Cd24P24807 76 aa9.68□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Rchy1Q9CR50 261 aa9.68□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Rabac1Q9Z0S9 185 aa9.68□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Igkv4-57-1A0A075B5M4 119 aa9.68□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Psmg4P0C7N9 123 aa9.68□□□□□ -0.86
Rnf4-201ENSMUST00000030992 P0C913 63 aa9.68□□□□□ -0.86
Rnf4-201ENSMUST00000030992 1700067P10RikG3X8U2 183 aa9.67□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Sprr3O09116 238 aa9.67□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Khdc1aQ3UWR2 166 aa9.67□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Klk15Q8CGR4 254 aa9.67□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Mrpl20Q9CQL4 149 aa9.67□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Lamtor2Q9JHS3 125 aa9.67□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Gm5157A0A087WRH8 301 aa9.67□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Ighv1-82A0A0G2JEU7 117 aa9.67□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Gm28305F6U473 122 aa9.67□□□□□ -0.86
Rnf4-201ENSMUST00000030992 AponG3X9D6 251 aa9.67□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Ins2P01326 110 aa9.67□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Ighv1-80A0A075B5Y3 117 aa9.66□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Gm17455G3UW87 128 aa9.66□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Map1lc3aQ91VR7 121 aa9.66□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Trav14-2A0A075B694 121 aa9.66□□□□□ -0.86
Rnf4-201ENSMUST00000030992 A0A1Y7VMQ4 148 aa9.66□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Nat8f4G5E8L3 226 aa9.66□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Defa-rs7P50715 91 aa9.66□□□□□ -0.86
Rnf4-201ENSMUST00000030992 BlcapP62951 87 aa9.66□□□□□ -0.86
Rnf4-201ENSMUST00000030992 P01643 108 aa9.65□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Gm10775Q3V290 127 aa9.65□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Tspo2Q9CRZ8 162 aa9.65□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Nit2Q9JHW2 276 aa9.65□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Gm26938S4R185 226 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 176.7 ms