RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 FP248Q71RG6 208 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-229ENST00000641891 SSBP3-AS1Q7Z2R9 100 aa9.91□□□□□ -0.82
PHGDH-229ENST00000641891 SMIM26A0A096LP01 95 aa9.9□□□□□ -0.82
PHGDH-229ENST00000641891 C1orf64Q8NEQ6 169 aa9.9□□□□□ -0.83
PHGDH-229ENST00000641891 CD164Q04900 197 aa9.89□□□□□ -0.83
PHGDH-229ENST00000641891 H3BPC8 53 aa9.88□□□□□ -0.83
PHGDH-229ENST00000641891 NDUFS5O43920 106 aa9.87□□□□□ -0.83
PHGDH-229ENST00000641891 MRPL34Q9BQ48 92 aaKnown RBP9.86□□□□□ -0.83
PHGDH-229ENST00000641891 SACSQ9NZJ4 4579 aa9.86□□□□□ -0.83
PHGDH-229ENST00000641891 VPS13BQ7Z7G8 4022 aa9.85□□□□□ -0.83
PHGDH-229ENST00000641891 KRTAP1-4P0C5Y4 121 aa9.85□□□□□ -0.83
PHGDH-229ENST00000641891 TP53AIP1Q9HCN2 124 aa9.84□□□□□ -0.83
PHGDH-229ENST00000641891 CYP4F30PQ9H0H9 118 aa9.83□□□□□ -0.84
PHGDH-229ENST00000641891 PKHD1P08F94 4074 aa9.82□□□□□ -0.84
PHGDH-229ENST00000641891 MPLKIPQ8TAP9 179 aa9.79□□□□□ -0.84
PHGDH-229ENST00000641891 PCOTHQ58A44 107 aa9.77□□□□□ -0.85
PHGDH-229ENST00000641891 C1orf195Q5TG92 126 aa9.76□□□□□ -0.85
PHGDH-229ENST00000641891 SPANXA2-OT1Q8N9U9 137 aa9.76□□□□□ -0.85
PHGDH-229ENST00000641891 PLA2G1BP04054 148 aaKnown RBP9.74□□□□□ -0.85
PHGDH-229ENST00000641891 Q5W150 140 aa9.73□□□□□ -0.85
PHGDH-229ENST00000641891 C8orf87E5RJ46 101 aa9.71□□□□□ -0.86
PHGDH-229ENST00000641891 SMR3BP02814 79 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-229ENST00000641891 TYMSOSQ8TAI1 123 aa9.69□□□□□ -0.86
PHGDH-229ENST00000641891 DYNC1H1Q14204 4646 aaKnown RBP9.69□□□□□ -0.86
PHGDH-229ENST00000641891 LINC00313P59037 77 aa9.68□□□□□ -0.86
PHGDH-229ENST00000641891 LINC00336Q6ZUF6 198 aa9.68□□□□□ -0.86
PHGDH-229ENST00000641891 IGLV7-46A0A075B6I9 117 aa9.68□□□□□ -0.86
PHGDH-229ENST00000641891 KRTAP13-3Q3SY46 172 aa9.68□□□□□ -0.86
PHGDH-229ENST00000641891 A0A1B0GVY2 172 aa9.67□□□□□ -0.86
PHGDH-229ENST00000641891 LIMD2Q9BT23 127 aa9.66□□□□□ -0.86
PHGDH-229ENST00000641891 PRR26Q8N8Z3 221 aa9.64□□□□□ -0.87
PHGDH-229ENST00000641891 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
PHGDH-229ENST00000641891 RETNLBQ9BQ08 111 aa9.62□□□□□ -0.87
PHGDH-229ENST00000641891 LOC101927531A0A1B0GV80 90 aa9.6□□□□□ -0.87
PHGDH-229ENST00000641891 KRTAP16-1A8MUX0 517 aa9.6□□□□□ -0.87
PHGDH-229ENST00000641891 Q1T7F1 81 aa9.6□□□□□ -0.87
PHGDH-229ENST00000641891 Q8N9P0 234 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-229ENST00000641891 COA5Q86WW8 74 aa9.6□□□□□ -0.87
PHGDH-229ENST00000641891 SPINK1P00995 79 aa9.58□□□□□ -0.88
PHGDH-229ENST00000641891 RYR2Q92736 4967 aa9.58□□□□□ -0.88
PHGDH-229ENST00000641891 APOBP04114 4563 aaKnown RBP9.58□□□□□ -0.88
PHGDH-229ENST00000641891 KRTAP10-4P60372 401 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-229ENST00000641891 LINC00304Q8N9R0 145 aa9.56□□□□□ -0.88
PHGDH-229ENST00000641891 FAT1Q14517 4588 aa9.54□□□□□ -0.88
PHGDH-229ENST00000641891 PSPHP1O15172 72 aa9.54□□□□□ -0.88
PHGDH-229ENST00000641891 FAM229AH3BQW9 127 aa9.53□□□□□ -0.88
PHGDH-229ENST00000641891 KMT2CQ8NEZ4 4911 aaKnown RBP9.52□□□□□ -0.89
PHGDH-229ENST00000641891 HRES1P13985 223 aa9.5□□□□□ -0.89
PHGDH-229ENST00000641891 BRK1Q8WUW1 75 aa9.48□□□□□ -0.89
PHGDH-229ENST00000641891 A8MUN3 132 aa9.47□□□□□ -0.89
PHGDH-229ENST00000641891 IGKV2-30P06310 120 aa9.46□□□□□ -0.89
PHGDH-229ENST00000641891 RPS29P62273 56 aaKnown RBP9.45□□□□□ -0.9
PHGDH-229ENST00000641891 SPAG11AQ6PDA7 123 aa9.45□□□□□ -0.9
PHGDH-229ENST00000641891 V9GYY9 64 aa9.44□□□□□ -0.9
PHGDH-229ENST00000641891 SEC61GP60059 68 aa9.44□□□□□ -0.9
PHGDH-229ENST00000641891 PRO0628Q9UI54 55 aa9.43□□□□□ -0.9
PHGDH-229ENST00000641891 PKHD1L1Q86WI1 4243 aa9.42□□□□□ -0.9
PHGDH-229ENST00000641891 IGKV2D-30A0A075B6S6 120 aa9.4□□□□□ -0.91
PHGDH-229ENST00000641891 Q5VV11 94 aa9.4□□□□□ -0.91
PHGDH-229ENST00000641891 PRR15LQ9BU68 103 aa9.39□□□□□ -0.91
PHGDH-229ENST00000641891 DMAC1Q96GE9 116 aa9.36□□□□□ -0.91
PHGDH-229ENST00000641891 C9orf92A6NGG3 77 aa9.34□□□□□ -0.91
PHGDH-229ENST00000641891 ACYP2P14621 99 aa9.34□□□□□ -0.91
PHGDH-229ENST00000641891 LINC01558Q9Y6Z2 57 aa9.3□□□□□ -0.92
PHGDH-229ENST00000641891 CHKB-CPT1BH3BT56 60 aa9.29□□□□□ -0.92
PHGDH-229ENST00000641891 A8MU10 97 aa9.26□□□□□ -0.93
PHGDH-229ENST00000641891 RYR3Q15413 4870 aa9.26□□□□□ -0.93
PHGDH-229ENST00000641891 Q75L30 129 aa9.25□□□□□ -0.93
PHGDH-229ENST00000641891 HSPG2P98160 4391 aa9.23□□□□□ -0.93
PHGDH-229ENST00000641891 Q5VSD8 79 aa9.23□□□□□ -0.93
PHGDH-229ENST00000641891 C7orf65Q6ZTY9 151 aa9.23□□□□□ -0.93
PHGDH-229ENST00000641891 A8MUU9 505 aa9.22□□□□□ -0.93
PHGDH-229ENST00000641891 Q8N1X5 172 aa9.22□□□□□ -0.93
PHGDH-229ENST00000641891 C20orf166-AS1Q96NR2 134 aa9.22□□□□□ -0.93
PHGDH-229ENST00000641891 LRP1Q07954 4544 aaKnown RBP9.21□□□□□ -0.94
PHGDH-229ENST00000641891 KRTAP17-1Q9BYP8 105 aa9.19□□□□□ -0.94
PHGDH-229ENST00000641891 FLG2Q5D862 2391 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-229ENST00000641891 TNXBP22105 4242 aa9.17□□□□□ -0.94
PHGDH-229ENST00000641891 A6NED7 52 aa9.17□□□□□ -0.94
PHGDH-229ENST00000641891 KRTAP10-8P60410 259 aa9.15□□□□□ -0.94
PHGDH-229ENST00000641891 LCA10Q71F78 164 aa9.13□□□□□ -0.95
PHGDH-229ENST00000641891 SPINK7P58062 85 aa9.12□□□□□ -0.95
PHGDH-229ENST00000641891 FAT3Q8TDW7 4589 aa9.12□□□□□ -0.95
PHGDH-229ENST00000641891 RYR1P21817 5038 aa9.11□□□□□ -0.95
PHGDH-229ENST00000641891 A0A1B0GU69 56 aa9.03□□□□□ -0.96
PHGDH-229ENST00000641891 CDC42SE1Q9NRR8 79 aa9.03□□□□□ -0.96
PHGDH-229ENST00000641891 KIAA1109Q2LD37 5005 aa9.01□□□□□ -0.97
PHGDH-229ENST00000641891 KRTAP3-1Q9BYR8 98 aa9□□□□□ -0.97
PHGDH-229ENST00000641891 SPTSSBQ8NFR3 76 aa9□□□□□ -0.97
PHGDH-229ENST00000641891 MT1HL1P0DM35 61 aa8.95□□□□□ -0.98
PHGDH-229ENST00000641891 MYCBP2O75592 4640 aa8.94□□□□□ -0.98
PHGDH-229ENST00000641891 ATP11AUNQ6ZP68 121 aa8.93□□□□□ -0.98
PHGDH-229ENST00000641891 PMAIP1Q13794 54 aa8.92□□□□□ -0.98
PHGDH-229ENST00000641891 EPPK1P58107 5090 aaKnown RBP8.92□□□□□ -0.98
PHGDH-229ENST00000641891 DMBT1Q9UGM3 2413 aaPredicted RBP8.92□□□□□ -0.98
PHGDH-229ENST00000641891 XP32Q5T750 250 aa8.9□□□□□ -0.98
PHGDH-229ENST00000641891 RPL37P61927 97 aaKnown RBP8.89□□□□□ -0.99
PHGDH-229ENST00000641891 COX6B2Q6YFQ2 88 aa8.85□□□□□ -0.99
PHGDH-229ENST00000641891 A6NN06 94 aa8.82□□□□□ -1
PHGDH-229ENST00000641891 UQCR11O14957 56 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms