RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 Q8N9L7 120 aa6.88□□□□□ -1.31
ERGIC3-220ENST00000640748 PRR4Q16378 134 aa6.86□□□□□ -1.31
ERGIC3-220ENST00000640748 TYMSOSQ8TAI1 123 aa6.86□□□□□ -1.31
ERGIC3-220ENST00000640748 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
ERGIC3-220ENST00000640748 K7EQZ3 153 aa6.85□□□□□ -1.31
ERGIC3-220ENST00000640748 Q96NJ1 140 aa6.84□□□□□ -1.31
ERGIC3-220ENST00000640748 KRTAP9-2Q9BYQ4 174 aa6.84□□□□□ -1.31
ERGIC3-220ENST00000640748 A8MWP4 228 aa6.83□□□□□ -1.32
ERGIC3-220ENST00000640748 NDUFB1O75438 58 aa6.82□□□□□ -1.32
ERGIC3-220ENST00000640748 ASB16-AS1Q495Z4 193 aa6.82□□□□□ -1.32
ERGIC3-220ENST00000640748 C4orf48Q5BLP8 95 aa6.82□□□□□ -1.32
ERGIC3-220ENST00000640748 LCE2AQ5TA79 106 aaPredicted RBP6.81□□□□□ -1.32
ERGIC3-220ENST00000640748 PRR15Q8IV56 129 aa6.81□□□□□ -1.32
ERGIC3-220ENST00000640748 SMIM20Q8N5G0 67 aa6.81□□□□□ -1.32
ERGIC3-220ENST00000640748 LIMD2Q9BT23 127 aa6.81□□□□□ -1.32
ERGIC3-220ENST00000640748 Q5XG85 94 aa6.8□□□□□ -1.32
ERGIC3-220ENST00000640748 HCG22E2RYF7 251 aa6.79□□□□□ -1.32
ERGIC3-220ENST00000640748 SERP2Q8N6R1 65 aa6.79□□□□□ -1.32
ERGIC3-220ENST00000640748 COX7CP15954 63 aa6.78□□□□□ -1.32
ERGIC3-220ENST00000640748 SPAG11AQ6PDA7 123 aa6.78□□□□□ -1.32
ERGIC3-220ENST00000640748 TRAV7A0A075B6U4 112 aa6.77□□□□□ -1.33
ERGIC3-220ENST00000640748 SPINK1P00995 79 aa6.77□□□□□ -1.33
ERGIC3-220ENST00000640748 LINC00304Q8N9R0 145 aa6.77□□□□□ -1.33
ERGIC3-220ENST00000640748 A0A0U1RQV1 116 aa6.76□□□□□ -1.33
ERGIC3-220ENST00000640748 UQCRQO14949 82 aa6.76□□□□□ -1.33
ERGIC3-220ENST00000640748 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
ERGIC3-220ENST00000640748 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
ERGIC3-220ENST00000640748 WFDC13Q8IUB5 93 aa6.75□□□□□ -1.33
ERGIC3-220ENST00000640748 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
ERGIC3-220ENST00000640748 CASC2Q6XLA1 102 aa6.74□□□□□ -1.33
ERGIC3-220ENST00000640748 MMP24-AS1A0A0U1RRL7 71 aa6.73□□□□□ -1.33
ERGIC3-220ENST00000640748 C1orf195Q5TG92 126 aa6.73□□□□□ -1.33
ERGIC3-220ENST00000640748 C8orf17Q9NRJ1 99 aa6.73□□□□□ -1.33
ERGIC3-220ENST00000640748 IGHV6-1A0A0B4J1U7 121 aa6.72□□□□□ -1.33
ERGIC3-220ENST00000640748 MUC17Q685J3 4493 aa6.71□□□□□ -1.33
ERGIC3-220ENST00000640748 OCR1Q9BZK8 76 aa6.71□□□□□ -1.34
ERGIC3-220ENST00000640748 hDV103S1A0JD37 113 aa6.7□□□□□ -1.34
ERGIC3-220ENST00000640748 RETNLBQ9BQ08 111 aa6.7□□□□□ -1.34
ERGIC3-220ENST00000640748 C8orf87E5RJ46 101 aa6.69□□□□□ -1.34
ERGIC3-220ENST00000640748 KRTAP9-6A0A140TA67 174 aa6.68□□□□□ -1.34
ERGIC3-220ENST00000640748 TMEM254Q8TBM7 123 aa6.67□□□□□ -1.34
ERGIC3-220ENST00000640748 TPRXLQ17RH7 258 aa6.65□□□□□ -1.34
ERGIC3-220ENST00000640748 C20orf197Q8N268 126 aa6.65□□□□□ -1.34
ERGIC3-220ENST00000640748 MRPL34Q9BQ48 92 aaKnown RBP6.65□□□□□ -1.34
ERGIC3-220ENST00000640748 LINC00313P59037 77 aa6.63□□□□□ -1.35
ERGIC3-220ENST00000640748 NOTCH2NLQ7Z3S9 236 aa6.63□□□□□ -1.35
ERGIC3-220ENST00000640748 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
ERGIC3-220ENST00000640748 C5orf47Q569G3 176 aa6.62□□□□□ -1.35
ERGIC3-220ENST00000640748 TP53AIP1Q9HCN2 124 aa6.61□□□□□ -1.35
ERGIC3-220ENST00000640748 NDUFS5O43920 106 aa6.6□□□□□ -1.35
ERGIC3-220ENST00000640748 KLKP1Q107X0 134 aa6.6□□□□□ -1.35
ERGIC3-220ENST00000640748 MP68P56378 58 aa6.58□□□□□ -1.36
ERGIC3-220ENST00000640748 SNURFQ9Y675 71 aa6.58□□□□□ -1.36
ERGIC3-220ENST00000640748 H0Y9P7 68 aa6.56□□□□□ -1.36
ERGIC3-220ENST00000640748 H3BPC8 53 aa6.56□□□□□ -1.36
ERGIC3-220ENST00000640748 CYSTM1Q9H1C7 97 aa6.56□□□□□ -1.36
ERGIC3-220ENST00000640748 TRAV22A0A0B4J277 110 aa6.55□□□□□ -1.36
ERGIC3-220ENST00000640748 NDUFC1O43677 76 aa6.55□□□□□ -1.36
ERGIC3-220ENST00000640748 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
ERGIC3-220ENST00000640748 KRTAP4-1Q9BYQ7 146 aa6.54□□□□□ -1.36
ERGIC3-220ENST00000640748 KRTAP13-3Q3SY46 172 aa6.53□□□□□ -1.36
ERGIC3-220ENST00000640748 Q8N9P0 234 aaPredicted RBP6.53□□□□□ -1.36
ERGIC3-220ENST00000640748 TMEM258P61165 79 aa6.52□□□□□ -1.37
ERGIC3-220ENST00000640748 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
ERGIC3-220ENST00000640748 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
ERGIC3-220ENST00000640748 H7BZZ5 65 aa6.51□□□□□ -1.37
ERGIC3-220ENST00000640748 FP248Q71RG6 208 aaPredicted RBP6.51□□□□□ -1.37
ERGIC3-220ENST00000640748 FSIP2Q5CZC0 6907 aa6.5□□□□□ -1.37
ERGIC3-220ENST00000640748 C1orf64Q8NEQ6 169 aa6.49□□□□□ -1.37
ERGIC3-220ENST00000640748 LCE2DQ5TA82 110 aaPredicted RBP6.48□□□□□ -1.37
ERGIC3-220ENST00000640748 C9orf92A6NGG3 77 aa6.46□□□□□ -1.38
ERGIC3-220ENST00000640748 FAM236DA0A1B0GTK5 79 aa6.45□□□□□ -1.38
ERGIC3-220ENST00000640748 FAM236CP0DP71 79 aa6.45□□□□□ -1.38
ERGIC3-220ENST00000640748 Q5W150 140 aa6.45□□□□□ -1.38
ERGIC3-220ENST00000640748 LOC101927531A0A1B0GV80 90 aa6.43□□□□□ -1.38
ERGIC3-220ENST00000640748 ATP5EP56381 51 aaPredicted RBP6.43□□□□□ -1.38
ERGIC3-220ENST00000640748 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
ERGIC3-220ENST00000640748 C20orf166-AS1Q96NR2 134 aa6.42□□□□□ -1.38
ERGIC3-220ENST00000640748 A8MUU9 505 aa6.41□□□□□ -1.38
ERGIC3-220ENST00000640748 SEC61BP60468 96 aaKnown RBP6.41□□□□□ -1.38
ERGIC3-220ENST00000640748 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
ERGIC3-220ENST00000640748 KRTAP19-2Q3LHN2 52 aa6.39□□□□□ -1.39
ERGIC3-220ENST00000640748 PCOTHQ58A44 107 aa6.38□□□□□ -1.39
ERGIC3-220ENST00000640748 XP32Q5T750 250 aa6.38□□□□□ -1.39
ERGIC3-220ENST00000640748 IGKV2-30P06310 120 aa6.37□□□□□ -1.39
ERGIC3-220ENST00000640748 Q75L30 129 aa6.36□□□□□ -1.39
ERGIC3-220ENST00000640748 SPANXA2-OT1Q8N9U9 137 aa6.36□□□□□ -1.39
ERGIC3-220ENST00000640748 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
ERGIC3-220ENST00000640748 RPS28P62857 69 aaKnown RBP6.32□□□□□ -1.4
ERGIC3-220ENST00000640748 MT1HP80294 61 aa6.32□□□□□ -1.4
ERGIC3-220ENST00000640748 SERP1Q9Y6X1 66 aa6.32□□□□□ -1.4
ERGIC3-220ENST00000640748 IGKV2D-30A0A075B6S6 120 aa6.31□□□□□ -1.4
ERGIC3-220ENST00000640748 C7orf65Q6ZTY9 151 aa6.3□□□□□ -1.4
ERGIC3-220ENST00000640748 RPL37P61927 97 aaKnown RBP6.29□□□□□ -1.4
ERGIC3-220ENST00000640748 ATP11AUNQ6ZP68 121 aa6.28□□□□□ -1.4
ERGIC3-220ENST00000640748 HRES1P13985 223 aa6.27□□□□□ -1.41
ERGIC3-220ENST00000640748 LORP23490 312 aaPredicted RBP6.26□□□□□ -1.41
ERGIC3-220ENST00000640748 KRTAP10-6P60371 365 aaPredicted RBP6.23□□□□□ -1.41
ERGIC3-220ENST00000640748 SPINK7P58062 85 aa6.2□□□□□ -1.42
ERGIC3-220ENST00000640748 ACYP2P14621 99 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms