RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 MYO15AQ9UKN7 3530 aa5.42□□□□□ -1.54
CACNA1D-230ENST00000640483 Q5VV11 94 aa5.41□□□□□ -1.54
CACNA1D-230ENST00000640483 PDZD2O15018 2839 aa5.41□□□□□ -1.54
CACNA1D-230ENST00000640483 CELSR2Q9HCU4 2923 aa5.4□□□□□ -1.54
CACNA1D-230ENST00000640483 LRBAP50851 2863 aa5.4□□□□□ -1.54
CACNA1D-230ENST00000640483 DCHS1Q96JQ0 3298 aa5.4□□□□□ -1.55
CACNA1D-230ENST00000640483 LOC400499M0QZD8 3231 aa5.4□□□□□ -1.55
CACNA1D-230ENST00000640483 ZANQ9Y493 2812 aa5.36□□□□□ -1.55
CACNA1D-230ENST00000640483 SPEGQ15772 3267 aa5.36□□□□□ -1.55
CACNA1D-230ENST00000640483 TACC2O95359 2948 aa5.36□□□□□ -1.55
CACNA1D-230ENST00000640483 NBEAL1Q6ZS30 2694 aa5.35□□□□□ -1.55
CACNA1D-230ENST00000640483 LINC01558Q9Y6Z2 57 aa5.35□□□□□ -1.55
CACNA1D-230ENST00000640483 FBN2P35556 2912 aa5.35□□□□□ -1.55
CACNA1D-230ENST00000640483 CFAP47Q6ZTR5 3102 aa5.33□□□□□ -1.56
CACNA1D-230ENST00000640483 KRTAP11-1Q8IUC1 163 aa5.33□□□□□ -1.56
CACNA1D-230ENST00000640483 NIPBLQ6KC79 2804 aaeCLIP5.32□□□□□ -1.56
CACNA1D-230ENST00000640483 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
CACNA1D-230ENST00000640483 KRTAP13-2Q52LG2 175 aa5.31□□□□□ -1.56
CACNA1D-230ENST00000640483 CRYBG3Q68DQ2 2970 aa5.3□□□□□ -1.56
CACNA1D-230ENST00000640483 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
CACNA1D-230ENST00000640483 OTOGQ6ZRI0 2925 aa5.29□□□□□ -1.56
CACNA1D-230ENST00000640483 A8MUU9 505 aa5.28□□□□□ -1.56
CACNA1D-230ENST00000640483 MXRA5Q9NR99 2828 aa5.27□□□□□ -1.57
CACNA1D-230ENST00000640483 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
CACNA1D-230ENST00000640483 A6NN06 94 aa5.27□□□□□ -1.57
CACNA1D-230ENST00000640483 KRTAP13-1Q8IUC0 172 aa5.26□□□□□ -1.57
CACNA1D-230ENST00000640483 KRTAP7-1Q8IUC3 87 aa5.26□□□□□ -1.57
CACNA1D-230ENST00000640483 DCHS2Q6V1P9 2916 aa5.25□□□□□ -1.57
CACNA1D-230ENST00000640483 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
CACNA1D-230ENST00000640483 DMDP11532 3685 aa5.23□□□□□ -1.57
CACNA1D-230ENST00000640483 NOTCH2NLQ7Z3S9 236 aa5.23□□□□□ -1.57
CACNA1D-230ENST00000640483 KRTAP10-10P60014 251 aa5.22□□□□□ -1.57
CACNA1D-230ENST00000640483 TNP1P09430 55 aa5.19□□□□□ -1.58
CACNA1D-230ENST00000640483 ROMO1P60602 79 aa5.19□□□□□ -1.58
CACNA1D-230ENST00000640483 STAB2Q8WWQ8 2551 aa5.18□□□□□ -1.58
CACNA1D-230ENST00000640483 KRTAP10-8P60410 259 aa5.17□□□□□ -1.58
CACNA1D-230ENST00000640483 NF1P21359 2839 aa5.17□□□□□ -1.58
CACNA1D-230ENST00000640483 A0A1B0GVY2 172 aa5.17□□□□□ -1.58
CACNA1D-230ENST00000640483 NBEAL2Q6ZNJ1 2754 aa5.16□□□□□ -1.58
CACNA1D-230ENST00000640483 SPATA8Q6RVD6 105 aa5.15□□□□□ -1.58
CACNA1D-230ENST00000640483 LAMA5O15230 3695 aa5.14□□□□□ -1.59
CACNA1D-230ENST00000640483 RELNP78509 3460 aa5.13□□□□□ -1.59
CACNA1D-230ENST00000640483 WDFY3Q8IZQ1 3526 aa5.12□□□□□ -1.59
CACNA1D-230ENST00000640483 KRTAP3-3Q9BYR6 98 aa5.11□□□□□ -1.59
CACNA1D-230ENST00000640483 KRTAP3-2Q9BYR7 98 aa5.11□□□□□ -1.59
CACNA1D-230ENST00000640483 FLG2Q5D862 2391 aaPredicted RBP5.11□□□□□ -1.59
CACNA1D-230ENST00000640483 DMBT1Q9UGM3 2413 aaPredicted RBP5.1□□□□□ -1.59
CACNA1D-230ENST00000640483 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
CACNA1D-230ENST00000640483 XP32Q5T750 250 aa5.09□□□□□ -1.59
CACNA1D-230ENST00000640483 ZFHX4Q86UP3 3567 aa5.09□□□□□ -1.6
CACNA1D-230ENST00000640483 KRTAP1-4P0C5Y4 121 aa5.08□□□□□ -1.6
CACNA1D-230ENST00000640483 P0C880 135 aa5.08□□□□□ -1.6
CACNA1D-230ENST00000640483 ASPMQ8IZT6 3477 aa5.05□□□□□ -1.6
CACNA1D-230ENST00000640483 TENM1Q9UKZ4 2725 aa5.03□□□□□ -1.6
CACNA1D-230ENST00000640483 BSNQ9UPA5 3926 aa5.01□□□□□ -1.61
CACNA1D-230ENST00000640483 ANK3Q12955 4377 aaKnown RBP5.01□□□□□ -1.61
CACNA1D-230ENST00000640483 SMG1Q96Q15 3661 aaKnown RBP5.01□□□□□ -1.61
CACNA1D-230ENST00000640483 NBPF19A0A087WUL8 3843 aa5□□□□□ -1.61
CACNA1D-230ENST00000640483 KRTAP16-1A8MUX0 517 aa4.99□□□□□ -1.61
CACNA1D-230ENST00000640483 NDUFAF8A1L188 74 aa4.97□□□□□ -1.61
CACNA1D-230ENST00000640483 FBN1P35555 2871 aaKnown RBP4.97□□□□□ -1.61
CACNA1D-230ENST00000640483 CSMD1Q96PZ7 3565 aa4.96□□□□□ -1.62
CACNA1D-230ENST00000640483 KRTAP13-3Q3SY46 172 aa4.94□□□□□ -1.62
CACNA1D-230ENST00000640483 KRTAP25-1Q3LHN0 102 aa4.92□□□□□ -1.62
CACNA1D-230ENST00000640483 TENM3Q9P273 2699 aa4.92□□□□□ -1.62
CACNA1D-230ENST00000640483 CELSR1Q9NYQ6 3014 aa4.92□□□□□ -1.62
CACNA1D-230ENST00000640483 VWFP04275 2813 aa4.91□□□□□ -1.62
CACNA1D-230ENST00000640483 FBN3Q75N90 2809 aa4.89□□□□□ -1.63
CACNA1D-230ENST00000640483 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
CACNA1D-230ENST00000640483 ZFHX3Q15911 3703 aa4.85□□□□□ -1.63
CACNA1D-230ENST00000640483 SPENQ96T58 3664 aaKnown RBP4.85□□□□□ -1.63
CACNA1D-230ENST00000640483 LCE2DQ5TA82 110 aaPredicted RBP4.85□□□□□ -1.63
CACNA1D-230ENST00000640483 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
CACNA1D-230ENST00000640483 TENM2Q9NT68 2774 aa4.85□□□□□ -1.63
CACNA1D-230ENST00000640483 PKD1L1Q8TDX9 2849 aa4.79□□□□□ -1.64
CACNA1D-230ENST00000640483 CUBNO60494 3623 aa4.76□□□□□ -1.65
CACNA1D-230ENST00000640483 AKAP9Q99996 3911 aa4.75□□□□□ -1.65
CACNA1D-230ENST00000640483 TGP01266 2768 aa4.74□□□□□ -1.65
CACNA1D-230ENST00000640483 SVEP1Q4LDE5 3571 aa4.73□□□□□ -1.65
CACNA1D-230ENST00000640483 CSMD2Q7Z408 3487 aa4.72□□□□□ -1.65
CACNA1D-230ENST00000640483 TRRAPQ9Y4A5 3859 aa4.64□□□□□ -1.67
CACNA1D-230ENST00000640483 MEGF8Q7Z7M0 2845 aa4.62□□□□□ -1.67
CACNA1D-230ENST00000640483 H0YAA0 97 aa4.59□□□□□ -1.67
CACNA1D-230ENST00000640483 ZNF469Q96JG9 3925 aaPredicted RBP4.59□□□□□ -1.67
CACNA1D-230ENST00000640483 ALMS1Q8TCU4 4167 aa4.56□□□□□ -1.68
CACNA1D-230ENST00000640483 HUWE1Q7Z6Z7 4374 aaKnown RBP4.55□□□□□ -1.68
CACNA1D-230ENST00000640483 DNAH9Q9NYC9 4486 aa4.52□□□□□ -1.69
CACNA1D-230ENST00000640483 ANK2Q01484 3957 aa4.5□□□□□ -1.69
CACNA1D-230ENST00000640483 MT1HL1P0DM35 61 aa4.49□□□□□ -1.69
CACNA1D-230ENST00000640483 DNHD1Q96M86 4753 aa4.44□□□□□ -1.7
CACNA1D-230ENST00000640483 KRTAP10-4P60372 401 aaPredicted RBP4.43□□□□□ -1.7
CACNA1D-230ENST00000640483 VPS13CQ709C8 3753 aa4.43□□□□□ -1.7
CACNA1D-230ENST00000640483 KRTAP4-5Q9BYR2 181 aa4.42□□□□□ -1.7
CACNA1D-230ENST00000640483 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
CACNA1D-230ENST00000640483 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.7
CACNA1D-230ENST00000640483 KRTAP12-2P59991 146 aa4.4□□□□□ -1.71
CACNA1D-230ENST00000640483 COL7A1Q02388 2944 aa4.4□□□□□ -1.71
CACNA1D-230ENST00000640483 CRCT1Q9UGL9 99 aa4.39□□□□□ -1.71
CACNA1D-230ENST00000640483 SRRM2Q9UQ35 2752 aaKnown RBP4.36□□□□□ -1.71
CACNA1D-230ENST00000640483 KRTAP3-1Q9BYR8 98 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms