RNA–Protein interactions for RNA: ENST00000640028.1

CACNA1H-212, Transcript of calcium voltage-gated channel subunit alpha1 H, humanhuman

TSL 5

Gene CACNA1H, Length 7,375 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1H-212ENST00000640028 ATMQ13315 3056 aa11.28□□□□□ -0.6
CACNA1H-212ENST00000640028 BOD1L1Q8NFC6 3051 aa11.24□□□□□ -0.61
CACNA1H-212ENST00000640028 WDFY3Q8IZQ1 3526 aa11.22□□□□□ -0.61
CACNA1H-212ENST00000640028 UTP20O75691 2785 aaKnown RBP11.22□□□□□ -0.61
CACNA1H-212ENST00000640028 IGSF10Q6WRI0 2623 aa11.22□□□□□ -0.61
CACNA1H-212ENST00000640028 NBEAQ8NFP9 2946 aa11.21□□□□□ -0.62
CACNA1H-212ENST00000640028 UBR5O95071 2799 aaPredicted RBP11.18□□□□□ -0.62
CACNA1H-212ENST00000640028 TNP1P09430 55 aa11.17□□□□□ -0.62
CACNA1H-212ENST00000640028 ZNF292O60281 2723 aa11.16□□□□□ -0.62
CACNA1H-212ENST00000640028 ITPR1Q14643 2758 aa11.14□□□□□ -0.63
CACNA1H-212ENST00000640028 DCHS1Q96JQ0 3298 aa11.13□□□□□ -0.63
CACNA1H-212ENST00000640028 ADGRG4Q8IZF6 3080 aa11.12□□□□□ -0.63
CACNA1H-212ENST00000640028 ASPMQ8IZT6 3477 aa11.1□□□□□ -0.63
CACNA1H-212ENST00000640028 ITPR2Q14571 2701 aa11.09□□□□□ -0.63
CACNA1H-212ENST00000640028 USP34Q70CQ2 3546 aa11.06□□□□□ -0.64
CACNA1H-212ENST00000640028 A0A1B0GVY2 172 aa11.06□□□□□ -0.64
CACNA1H-212ENST00000640028 KRTAP10-8P60410 259 aa11.06□□□□□ -0.64
CACNA1H-212ENST00000640028 ZZEF1O43149 2961 aa11.05□□□□□ -0.64
CACNA1H-212ENST00000640028 SPTBN5Q9NRC6 3674 aaKnown RBP11.05□□□□□ -0.64
CACNA1H-212ENST00000640028 TACC2O95359 2948 aa11.02□□□□□ -0.65
CACNA1H-212ENST00000640028 LOC400499M0QZD8 3231 aa11.01□□□□□ -0.65
CACNA1H-212ENST00000640028 CHD9Q3L8U1 2897 aa11□□□□□ -0.65
CACNA1H-212ENST00000640028 DMXL1Q9Y485 3027 aa10.99□□□□□ -0.65
CACNA1H-212ENST00000640028 HIVEP1P15822 2718 aa10.98□□□□□ -0.65
CACNA1H-212ENST00000640028 KRTAP7-1Q8IUC3 87 aa10.97□□□□□ -0.65
CACNA1H-212ENST00000640028 TNRC18O15417 2968 aaPredicted RBP10.96□□□□□ -0.66
CACNA1H-212ENST00000640028 KRTAP13-2Q52LG2 175 aa10.92□□□□□ -0.66
CACNA1H-212ENST00000640028 EYSQ5T1H1 3165 aa10.85□□□□□ -0.67
CACNA1H-212ENST00000640028 CELSR2Q9HCU4 2923 aa10.76□□□□□ -0.69
CACNA1H-212ENST00000640028 CSMD1Q96PZ7 3565 aa10.73□□□□□ -0.69
CACNA1H-212ENST00000640028 H0YAA0 97 aa10.71□□□□□ -0.69
CACNA1H-212ENST00000640028 LAMA5O15230 3695 aa10.71□□□□□ -0.69
CACNA1H-212ENST00000640028 Q6ZRN7 208 aaPredicted RBP10.67□□□□□ -0.7
CACNA1H-212ENST00000640028 ZFHX4Q86UP3 3567 aa10.64□□□□□ -0.71
CACNA1H-212ENST00000640028 RPS29P62273 56 aaKnown RBP10.61□□□□□ -0.71
CACNA1H-212ENST00000640028 KRTAP13-1Q8IUC0 172 aa10.6□□□□□ -0.71
CACNA1H-212ENST00000640028 P0C880 135 aa10.59□□□□□ -0.71
CACNA1H-212ENST00000640028 CELSR1Q9NYQ6 3014 aa10.59□□□□□ -0.71
CACNA1H-212ENST00000640028 KRTAP10-10P60014 251 aa10.54□□□□□ -0.72
CACNA1H-212ENST00000640028 PP632Q6XCG6 107 aa10.5□□□□□ -0.73
CACNA1H-212ENST00000640028 RELNP78509 3460 aa10.5□□□□□ -0.73
CACNA1H-212ENST00000640028 FLNCQ14315 2725 aa10.48□□□□□ -0.73
CACNA1H-212ENST00000640028 TENM1Q9UKZ4 2725 aa10.47□□□□□ -0.73
CACNA1H-212ENST00000640028 NF1P21359 2839 aa10.44□□□□□ -0.74
CACNA1H-212ENST00000640028 DCHS2Q6V1P9 2916 aa10.43□□□□□ -0.74
CACNA1H-212ENST00000640028 KRTAP21-3Q3LHN1 58 aa10.39□□□□□ -0.75
CACNA1H-212ENST00000640028 XP32Q5T750 250 aa10.37□□□□□ -0.75
CACNA1H-212ENST00000640028 CUBNO60494 3623 aa10.33□□□□□ -0.76
CACNA1H-212ENST00000640028 NIPBLQ6KC79 2804 aaeCLIP10.3□□□□□ -0.76
CACNA1H-212ENST00000640028 NBPF19A0A087WUL8 3843 aa10.27□□□□□ -0.77
CACNA1H-212ENST00000640028 TGP01266 2768 aa10.27□□□□□ -0.77
CACNA1H-212ENST00000640028 FBN2P35556 2912 aa10.26□□□□□ -0.77
CACNA1H-212ENST00000640028 PRO2289Q9P1D8 64 aa10.25□□□□□ -0.77
CACNA1H-212ENST00000640028 SMG1Q96Q15 3661 aaKnown RBP10.25□□□□□ -0.77
CACNA1H-212ENST00000640028 TENM3Q9P273 2699 aa10.24□□□□□ -0.77
CACNA1H-212ENST00000640028 PDZD2O15018 2839 aa10.23□□□□□ -0.77
CACNA1H-212ENST00000640028 TENM4Q6N022 2769 aa10.22□□□□□ -0.77
CACNA1H-212ENST00000640028 DMDP11532 3685 aa10.14□□□□□ -0.79
CACNA1H-212ENST00000640028 KRTAP12-2P59991 146 aa10.13□□□□□ -0.79
CACNA1H-212ENST00000640028 SPENQ96T58 3664 aaKnown RBP10.13□□□□□ -0.79
CACNA1H-212ENST00000640028 VWFP04275 2813 aa10.13□□□□□ -0.79
CACNA1H-212ENST00000640028 PKD1L1Q8TDX9 2849 aa10.12□□□□□ -0.79
CACNA1H-212ENST00000640028 KRTAP1-4P0C5Y4 121 aa10.12□□□□□ -0.79
CACNA1H-212ENST00000640028 SVEP1Q4LDE5 3571 aa10.05□□□□□ -0.8
CACNA1H-212ENST00000640028 ZANQ9Y493 2812 aa10.03□□□□□ -0.8
CACNA1H-212ENST00000640028 TPRXLQ17RH7 258 aa9.9□□□□□ -0.83
CACNA1H-212ENST00000640028 TENM2Q9NT68 2774 aa9.86□□□□□ -0.83
CACNA1H-212ENST00000640028 HRNRQ86YZ3 2850 aaPredicted RBP9.81□□□□□ -0.84
CACNA1H-212ENST00000640028 KRTAP13-3Q3SY46 172 aa9.8□□□□□ -0.84
CACNA1H-212ENST00000640028 MXRA5Q9NR99 2828 aa9.8□□□□□ -0.84
CACNA1H-212ENST00000640028 CRCT1Q9UGL9 99 aa9.76□□□□□ -0.85
CACNA1H-212ENST00000640028 SRRM2Q9UQ35 2752 aaKnown RBP9.75□□□□□ -0.85
CACNA1H-212ENST00000640028 KRTAP15-1Q3LI76 137 aa9.75□□□□□ -0.85
CACNA1H-212ENST00000640028 KRTAP12-1P59990 96 aa9.71□□□□□ -0.85
CACNA1H-212ENST00000640028 KRTAP13-4Q3LI77 160 aa9.68□□□□□ -0.86
CACNA1H-212ENST00000640028 ZFHX3Q15911 3703 aa9.64□□□□□ -0.87
CACNA1H-212ENST00000640028 MUC3AQ02505 3323 aa9.54□□□□□ -0.88
CACNA1H-212ENST00000640028 COL7A1Q02388 2944 aa9.47□□□□□ -0.89
CACNA1H-212ENST00000640028 CSMD2Q7Z408 3487 aa9.43□□□□□ -0.9
CACNA1H-212ENST00000640028 CSMD3Q7Z407 3707 aa9.43□□□□□ -0.9
CACNA1H-212ENST00000640028 KRTAP3-1Q9BYR8 98 aa9.39□□□□□ -0.91
CACNA1H-212ENST00000640028 MEGF8Q7Z7M0 2845 aa9.34□□□□□ -0.91
CACNA1H-212ENST00000640028 VPS13CQ709C8 3753 aa9.31□□□□□ -0.92
CACNA1H-212ENST00000640028 FBN3Q75N90 2809 aa9.2□□□□□ -0.94
CACNA1H-212ENST00000640028 TRRAPQ9Y4A5 3859 aa9.17□□□□□ -0.94
CACNA1H-212ENST00000640028 KRTAP10-6P60371 365 aaPredicted RBP9.14□□□□□ -0.95
CACNA1H-212ENST00000640028 FBN1P35555 2871 aaKnown RBP9.13□□□□□ -0.95
CACNA1H-212ENST00000640028 INE1O15225 51 aa9.05□□□□□ -0.96
CACNA1H-212ENST00000640028 OTOGQ6ZRI0 2925 aa9.02□□□□□ -0.96
CACNA1H-212ENST00000640028 KRTAP10-12P60413 245 aa8.97□□□□□ -0.97
CACNA1H-212ENST00000640028 BSNQ9UPA5 3926 aa8.85□□□□□ -0.99
CACNA1H-212ENST00000640028 KRTAP10-5P60370 271 aa8.83□□□□□ -1
CACNA1H-212ENST00000640028 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
CACNA1H-212ENST00000640028 LCE3AQ5TA76 89 aa8.72□□□□□ -1.01
CACNA1H-212ENST00000640028 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
CACNA1H-212ENST00000640028 KRTAP12-3P60328 96 aa8.71□□□□□ -1.02
CACNA1H-212ENST00000640028 KRTAP4-5Q9BYR2 181 aa8.64□□□□□ -1.03
CACNA1H-212ENST00000640028 ANK3Q12955 4377 aaKnown RBP8.6□□□□□ -1.03
CACNA1H-212ENST00000640028 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
CACNA1H-212ENST00000640028 AKAP9Q99996 3911 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms