RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 Q8N9L7 120 aa11.55□□□□□ -0.56
SCARB2-219ENST00000639738 K7EQZ3 153 aa11.55□□□□□ -0.56
SCARB2-219ENST00000639738 PRR15Q8IV56 129 aa11.54□□□□□ -0.56
SCARB2-219ENST00000639738 A0A1B0GVX0 72 aa11.53□□□□□ -0.56
SCARB2-219ENST00000639738 MT-ATP8P03928 68 aa11.52□□□□□ -0.57
SCARB2-219ENST00000639738 NOTCH2NLQ7Z3S9 236 aa11.51□□□□□ -0.57
SCARB2-219ENST00000639738 IGLV7-46A0A075B6I9 117 aa11.5□□□□□ -0.57
SCARB2-219ENST00000639738 NDUFB1O75438 58 aa11.48□□□□□ -0.57
SCARB2-219ENST00000639738 IGHV6-1A0A0B4J1U7 121 aa11.47□□□□□ -0.57
SCARB2-219ENST00000639738 PRR4Q16378 134 aa11.47□□□□□ -0.57
SCARB2-219ENST00000639738 KRTAP13-3Q3SY46 172 aa11.45□□□□□ -0.58
SCARB2-219ENST00000639738 LRP2P98164 4655 aa11.44□□□□□ -0.58
SCARB2-219ENST00000639738 C8orf17Q9NRJ1 99 aa11.44□□□□□ -0.58
SCARB2-219ENST00000639738 MMP24-AS1A0A0U1RRL7 71 aa11.43□□□□□ -0.58
SCARB2-219ENST00000639738 KRTAP16-1A8MUX0 517 aa11.41□□□□□ -0.58
SCARB2-219ENST00000639738 C8orf87E5RJ46 101 aa11.41□□□□□ -0.58
SCARB2-219ENST00000639738 IMUPQ9GZP8 106 aa11.4□□□□□ -0.58
SCARB2-219ENST00000639738 LPAP08519 4548 aa11.4□□□□□ -0.58
SCARB2-219ENST00000639738 A0A087WVE0 104 aa11.4□□□□□ -0.59
SCARB2-219ENST00000639738 LINC00313P59037 77 aa11.4□□□□□ -0.59
SCARB2-219ENST00000639738 HIST1H4AP62805 103 aaKnown RBP11.39□□□□□ -0.59
SCARB2-219ENST00000639738 TPRXLQ17RH7 258 aa11.39□□□□□ -0.59
SCARB2-219ENST00000639738 C9orf92A6NGG3 77 aa11.38□□□□□ -0.59
SCARB2-219ENST00000639738 HCG22E2RYF7 251 aa11.34□□□□□ -0.59
SCARB2-219ENST00000639738 RNF213Q63HN8 5207 aa11.32□□□□□ -0.6
SCARB2-219ENST00000639738 hDV103S1A0JD37 113 aa11.31□□□□□ -0.6
SCARB2-219ENST00000639738 WFDC13Q8IUB5 93 aa11.31□□□□□ -0.6
SCARB2-219ENST00000639738 CASC2Q6XLA1 102 aa11.3□□□□□ -0.6
SCARB2-219ENST00000639738 TMEM254Q8TBM7 123 aa11.3□□□□□ -0.6
SCARB2-219ENST00000639738 XP32Q5T750 250 aa11.29□□□□□ -0.6
SCARB2-219ENST00000639738 Q8N9P0 234 aaPredicted RBP11.27□□□□□ -0.61
SCARB2-219ENST00000639738 C20orf166-AS1Q96NR2 134 aa11.26□□□□□ -0.61
SCARB2-219ENST00000639738 MRPL34Q9BQ48 92 aaKnown RBP11.26□□□□□ -0.61
SCARB2-219ENST00000639738 A8MUU9 505 aa11.25□□□□□ -0.61
SCARB2-219ENST00000639738 Q75L30 129 aa11.19□□□□□ -0.62
SCARB2-219ENST00000639738 FAM236AA0A1B0GUQ0 79 aa11.16□□□□□ -0.62
SCARB2-219ENST00000639738 FAM236BA0A1B0GV22 79 aa11.16□□□□□ -0.62
SCARB2-219ENST00000639738 RPL37P61927 97 aaKnown RBP11.16□□□□□ -0.62
SCARB2-219ENST00000639738 OCR1Q9BZK8 76 aa11.11□□□□□ -0.63
SCARB2-219ENST00000639738 MUC17Q685J3 4493 aa11.09□□□□□ -0.63
SCARB2-219ENST00000639738 NDUFS5O43920 106 aa11.08□□□□□ -0.64
SCARB2-219ENST00000639738 Q5W150 140 aa11.07□□□□□ -0.64
SCARB2-219ENST00000639738 TP53AIP1Q9HCN2 124 aa11.05□□□□□ -0.64
SCARB2-219ENST00000639738 SCGB1A1P11684 91 aa11.04□□□□□ -0.64
SCARB2-219ENST00000639738 ZCCHC13Q8WW36 166 aaKnown RBP11.04□□□□□ -0.64
SCARB2-219ENST00000639738 ATOX1O00244 68 aa11.01□□□□□ -0.65
SCARB2-219ENST00000639738 UQCRQO14949 82 aa10.99□□□□□ -0.65
SCARB2-219ENST00000639738 PCOTHQ58A44 107 aa10.99□□□□□ -0.65
SCARB2-219ENST00000639738 ATP11AUNQ6ZP68 121 aa10.98□□□□□ -0.65
SCARB2-219ENST00000639738 TRAV7A0A075B6U4 112 aa10.96□□□□□ -0.65
SCARB2-219ENST00000639738 SMIM20Q8N5G0 67 aa10.95□□□□□ -0.66
SCARB2-219ENST00000639738 SEC61BP60468 96 aaKnown RBP10.94□□□□□ -0.66
SCARB2-219ENST00000639738 TRAV22A0A0B4J277 110 aa10.91□□□□□ -0.66
SCARB2-219ENST00000639738 SERP2Q8N6R1 65 aa10.89□□□□□ -0.67
SCARB2-219ENST00000639738 KRTAP4-1Q9BYQ7 146 aa10.89□□□□□ -0.67
SCARB2-219ENST00000639738 C5orf47Q569G3 176 aa10.88□□□□□ -0.67
SCARB2-219ENST00000639738 MUC2Q02817 5179 aa10.88□□□□□ -0.67
SCARB2-219ENST00000639738 H0Y9P7 68 aa10.87□□□□□ -0.67
SCARB2-219ENST00000639738 IGKV2-30P06310 120 aa10.82□□□□□ -0.68
SCARB2-219ENST00000639738 COX7CP15954 63 aa10.79□□□□□ -0.68
SCARB2-219ENST00000639738 SPINK7P58062 85 aa10.79□□□□□ -0.68
SCARB2-219ENST00000639738 ANAPC13Q9BS18 74 aa10.79□□□□□ -0.68
SCARB2-219ENST00000639738 MP68P56378 58 aa10.78□□□□□ -0.68
SCARB2-219ENST00000639738 LINC00208Q96KT6 92 aa10.78□□□□□ -0.68
SCARB2-219ENST00000639738 H3BPC8 53 aa10.77□□□□□ -0.69
SCARB2-219ENST00000639738 C1orf64Q8NEQ6 169 aa10.77□□□□□ -0.69
SCARB2-219ENST00000639738 A0A0U1RQV1 116 aa10.76□□□□□ -0.69
SCARB2-219ENST00000639738 CYP4F30PQ9H0H9 118 aa10.76□□□□□ -0.69
SCARB2-219ENST00000639738 LOC101927531A0A1B0GV80 90 aa10.75□□□□□ -0.69
SCARB2-219ENST00000639738 IGKV2D-30A0A075B6S6 120 aa10.74□□□□□ -0.69
SCARB2-219ENST00000639738 C7orf65Q6ZTY9 151 aa10.74□□□□□ -0.69
SCARB2-219ENST00000639738 HRES1P13985 223 aa10.7□□□□□ -0.7
SCARB2-219ENST00000639738 C20orf197Q8N268 126 aa10.69□□□□□ -0.7
SCARB2-219ENST00000639738 KLKP1Q107X0 134 aa10.67□□□□□ -0.7
SCARB2-219ENST00000639738 SNURFQ9Y675 71 aa10.67□□□□□ -0.7
SCARB2-219ENST00000639738 MPLKIPQ8TAP9 179 aa10.65□□□□□ -0.7
SCARB2-219ENST00000639738 CCDC179H3BU77 68 aa10.63□□□□□ -0.71
SCARB2-219ENST00000639738 CYSTM1Q9H1C7 97 aa10.61□□□□□ -0.71
SCARB2-219ENST00000639738 KRTAP19-2Q3LHN2 52 aa10.59□□□□□ -0.71
SCARB2-219ENST00000639738 LCE2AQ5TA79 106 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-219ENST00000639738 FAT4Q6V0I7 4981 aa10.55□□□□□ -0.72
SCARB2-219ENST00000639738 C4orf26Q17RF5 130 aa10.53□□□□□ -0.72
SCARB2-219ENST00000639738 KRTAP3-1Q9BYR8 98 aa10.5□□□□□ -0.73
SCARB2-219ENST00000639738 H7BZZ5 65 aa10.48□□□□□ -0.73
SCARB2-219ENST00000639738 PCP4P48539 62 aa10.48□□□□□ -0.73
SCARB2-219ENST00000639738 COX6B2Q6YFQ2 88 aa10.47□□□□□ -0.73
SCARB2-219ENST00000639738 NDUFC1O43677 76 aa10.45□□□□□ -0.74
SCARB2-219ENST00000639738 LCE2CQ5TA81 110 aa10.45□□□□□ -0.74
SCARB2-219ENST00000639738 KRTAP9-2Q9BYQ4 174 aa10.44□□□□□ -0.74
SCARB2-219ENST00000639738 RBM12B-AS1Q9P1G2 102 aa10.43□□□□□ -0.74
SCARB2-219ENST00000639738 SPANXA2-OT1Q8N9U9 137 aa10.39□□□□□ -0.75
SCARB2-219ENST00000639738 FLGP20930 4061 aaPredicted RBP10.35□□□□□ -0.75
SCARB2-219ENST00000639738 DMAC1Q96GE9 116 aa10.34□□□□□ -0.75
SCARB2-219ENST00000639738 FAM236DA0A1B0GTK5 79 aa10.31□□□□□ -0.76
SCARB2-219ENST00000639738 FAM236CP0DP71 79 aa10.31□□□□□ -0.76
SCARB2-219ENST00000639738 H1FX-AS1Q4G0G2 97 aa10.31□□□□□ -0.76
SCARB2-219ENST00000639738 A8MUN3 132 aa10.29□□□□□ -0.76
SCARB2-219ENST00000639738 LCE2DQ5TA82 110 aaPredicted RBP10.28□□□□□ -0.76
SCARB2-219ENST00000639738 TMEM258P61165 79 aa10.21□□□□□ -0.78
SCARB2-219ENST00000639738 MT1HP80294 61 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 278.1 ms