RNA–Protein interactions for RNA: ENST00000639092.1

ARHGEF9-238, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 4,657 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-238	ENST00000639092	LAMA1	P25391	3075 aa		4.99	□□□□□ -1.61
ARHGEF9-238	ENST00000639092	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.99	□□□□□ -1.61
ARHGEF9-238	ENST00000639092	ADGRG4	Q8IZF6	3080 aa		4.99	□□□□□ -1.61
ARHGEF9-238	ENST00000639092	LUZP6	Q538Z0	58 aa		4.98	□□□□□ -1.61
ARHGEF9-238	ENST00000639092	CELSR2	Q9HCU4	2923 aa		4.98	□□□□□ -1.61
ARHGEF9-238	ENST00000639092	LRBA	P50851	2863 aa		4.97	□□□□□ -1.61
ARHGEF9-238	ENST00000639092	SPEN	Q96T58	3664 aa	Known RBP	4.96	□□□□□ -1.61
ARHGEF9-238	ENST00000639092	KRTAP13-1	Q8IUC0	172 aa		4.95	□□□□□ -1.62
ARHGEF9-238	ENST00000639092	ASH1L	Q9NR48	2969 aa	Known RBP	4.95	□□□□□ -1.62
ARHGEF9-238	ENST00000639092	BOD1L1	Q8NFC6	3051 aa		4.94	□□□□□ -1.62
ARHGEF9-238	ENST00000639092	LAMA5	O15230	3695 aa		4.94	□□□□□ -1.62
ARHGEF9-238	ENST00000639092	ZAN	Q9Y493	2812 aa		4.93	□□□□□ -1.62
ARHGEF9-238	ENST00000639092		Q5VV11	94 aa		4.93	□□□□□ -1.62
ARHGEF9-238	ENST00000639092	CELSR3	Q9NYQ7	3312 aa		4.93	□□□□□ -1.62
ARHGEF9-238	ENST00000639092	DCHS1	Q96JQ0	3298 aa		4.93	□□□□□ -1.62
ARHGEF9-238	ENST00000639092	KRTAP11-1	Q8IUC1	163 aa		4.93	□□□□□ -1.62
ARHGEF9-238	ENST00000639092	KRTAP7-1	Q8IUC3	87 aa		4.92	□□□□□ -1.62
ARHGEF9-238	ENST00000639092	RPL37	P61927	97 aa	Known RBP	4.92	□□□□□ -1.62
ARHGEF9-238	ENST00000639092	DCHS2	Q6V1P9	2916 aa		4.92	□□□□□ -1.62
ARHGEF9-238	ENST00000639092	TENM3	Q9P273	2699 aa		4.91	□□□□□ -1.62
ARHGEF9-238	ENST00000639092		M0QZ58	72 aa		4.89	□□□□□ -1.63
ARHGEF9-238	ENST00000639092	CRYBG3	Q68DQ2	2970 aa		4.88	□□□□□ -1.63
ARHGEF9-238	ENST00000639092	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.88	□□□□□ -1.63
ARHGEF9-238	ENST00000639092	H1FX-AS1	Q4G0G2	97 aa		4.87	□□□□□ -1.63
ARHGEF9-238	ENST00000639092	NOTCH2NL	Q7Z3S9	236 aa		4.87	□□□□□ -1.63
ARHGEF9-238	ENST00000639092	PRAC1	Q96KF2	57 aa		4.87	□□□□□ -1.63
ARHGEF9-238	ENST00000639092	KRTAP13-2	Q52LG2	175 aa		4.87	□□□□□ -1.63
ARHGEF9-238	ENST00000639092	CFAP47	Q6ZTR5	3102 aa		4.86	□□□□□ -1.63
ARHGEF9-238	ENST00000639092	DMXL1	Q9Y485	3027 aa		4.84	□□□□□ -1.63
ARHGEF9-238	ENST00000639092		H3BS24	57 aa		4.83	□□□□□ -1.64
ARHGEF9-238	ENST00000639092	ADM2	Q7Z4H4	148 aa		4.82	□□□□□ -1.64
ARHGEF9-238	ENST00000639092	NF1	P21359	2839 aa		4.82	□□□□□ -1.64
ARHGEF9-238	ENST00000639092	ROMO1	P60602	79 aa		4.81	□□□□□ -1.64
ARHGEF9-238	ENST00000639092	CSMD2	Q7Z408	3487 aa		4.81	□□□□□ -1.64
ARHGEF9-238	ENST00000639092	PLAC4	Q8WY50	150 aa		4.81	□□□□□ -1.64
ARHGEF9-238	ENST00000639092	TENM1	Q9UKZ4	2725 aa		4.8	□□□□□ -1.64
ARHGEF9-238	ENST00000639092	SMG1	Q96Q15	3661 aa	Known RBP	4.77	□□□□□ -1.65
ARHGEF9-238	ENST00000639092	RELN	P78509	3460 aa		4.77	□□□□□ -1.65
ARHGEF9-238	ENST00000639092	SPATA8	Q6RVD6	105 aa		4.75	□□□□□ -1.65
ARHGEF9-238	ENST00000639092		A8MUU9	505 aa		4.74	□□□□□ -1.65
ARHGEF9-238	ENST00000639092	FBN2	P35556	2912 aa		4.73	□□□□□ -1.65
ARHGEF9-238	ENST00000639092	C20orf166-AS1	Q96NR2	134 aa		4.72	□□□□□ -1.65
ARHGEF9-238	ENST00000639092	MXRA5	Q9NR99	2828 aa		4.72	□□□□□ -1.65
ARHGEF9-238	ENST00000639092	TENM2	Q9NT68	2774 aa		4.7	□□□□□ -1.66
ARHGEF9-238	ENST00000639092	PDZD2	O15018	2839 aa		4.7	□□□□□ -1.66
ARHGEF9-238	ENST00000639092	KRTAP1-4	P0C5Y4	121 aa		4.68	□□□□□ -1.66
ARHGEF9-238	ENST00000639092	CSMD1	Q96PZ7	3565 aa		4.67	□□□□□ -1.66
ARHGEF9-238	ENST00000639092		A0A0A0MQY5	61 aa		4.67	□□□□□ -1.66
ARHGEF9-238	ENST00000639092		A8MU10	97 aa		4.67	□□□□□ -1.66
ARHGEF9-238	ENST00000639092	PKD1L1	Q8TDX9	2849 aa		4.64	□□□□□ -1.67
ARHGEF9-238	ENST00000639092		A6NN06	94 aa		4.63	□□□□□ -1.67
ARHGEF9-238	ENST00000639092	XP32	Q5T750	250 aa		4.61	□□□□□ -1.67
ARHGEF9-238	ENST00000639092	CELSR1	Q9NYQ6	3014 aa		4.6	□□□□□ -1.67
ARHGEF9-238	ENST00000639092	SVEP1	Q4LDE5	3571 aa		4.59	□□□□□ -1.67
ARHGEF9-238	ENST00000639092	TPRXL	Q17RH7	258 aa		4.59	□□□□□ -1.67
ARHGEF9-238	ENST00000639092		A0A1B0GVY2	172 aa		4.59	□□□□□ -1.67
ARHGEF9-238	ENST00000639092	BSN	Q9UPA5	3926 aa		4.57	□□□□□ -1.68
ARHGEF9-238	ENST00000639092	TNP1	P09430	55 aa		4.55	□□□□□ -1.68
ARHGEF9-238	ENST00000639092	TG	P01266	2768 aa		4.55	□□□□□ -1.68
ARHGEF9-238	ENST00000639092	KRTAP25-1	Q3LHN0	102 aa		4.54	□□□□□ -1.68
ARHGEF9-238	ENST00000639092	VPS13C	Q709C8	3753 aa		4.51	□□□□□ -1.69
ARHGEF9-238	ENST00000639092	VWF	P04275	2813 aa		4.51	□□□□□ -1.69
ARHGEF9-238	ENST00000639092	OTOG	Q6ZRI0	2925 aa		4.51	□□□□□ -1.69
ARHGEF9-238	ENST00000639092	KRTAP16-1	A8MUX0	517 aa		4.5	□□□□□ -1.69
ARHGEF9-238	ENST00000639092	KRTAP10-8	P60410	259 aa		4.5	□□□□□ -1.69
ARHGEF9-238	ENST00000639092	KRTAP13-3	Q3SY46	172 aa		4.49	□□□□□ -1.69
ARHGEF9-238	ENST00000639092	PP632	Q6XCG6	107 aa		4.45	□□□□□ -1.7
ARHGEF9-238	ENST00000639092	SRRM2	Q9UQ35	2752 aa	Known RBP	4.43	□□□□□ -1.7
ARHGEF9-238	ENST00000639092	FBN1	P35555	2871 aa	Known RBP	4.42	□□□□□ -1.7
ARHGEF9-238	ENST00000639092	NBPF19	A0A087WUL8	3843 aa		4.41	□□□□□ -1.7
ARHGEF9-238	ENST00000639092	ANK3	Q12955	4377 aa	Known RBP	4.4	□□□□□ -1.7
ARHGEF9-238	ENST00000639092	KRTAP10-10	P60014	251 aa		4.39	□□□□□ -1.71
ARHGEF9-238	ENST00000639092	NDUFAF8	A1L188	74 aa		4.38	□□□□□ -1.71
ARHGEF9-238	ENST00000639092		H0YAA0	97 aa		4.36	□□□□□ -1.71
ARHGEF9-238	ENST00000639092	PRO2289	Q9P1D8	64 aa		4.35	□□□□□ -1.71
ARHGEF9-238	ENST00000639092		P0C880	135 aa		4.32	□□□□□ -1.72
ARHGEF9-238	ENST00000639092	C10orf95	Q9H7T3	257 aa		4.32	□□□□□ -1.72
ARHGEF9-238	ENST00000639092	FBN3	Q75N90	2809 aa		4.25	□□□□□ -1.73
ARHGEF9-238	ENST00000639092	CUBN	O60494	3623 aa		4.24	□□□□□ -1.73
ARHGEF9-238	ENST00000639092	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.2	□□□□□ -1.74
ARHGEF9-238	ENST00000639092	COL7A1	Q02388	2944 aa		4.2	□□□□□ -1.74
ARHGEF9-238	ENST00000639092	KRTAP10-4	P60372	401 aa	Predicted RBP	4.18	□□□□□ -1.74
ARHGEF9-238	ENST00000639092	MEGF8	Q7Z7M0	2845 aa		4.16	□□□□□ -1.74
ARHGEF9-238	ENST00000639092	MT1HL1	P0DM35	61 aa		4.15	□□□□□ -1.74
ARHGEF9-238	ENST00000639092	KRTAP3-1	Q9BYR8	98 aa		4.11	□□□□□ -1.75
ARHGEF9-238	ENST00000639092	KRTAP13-4	Q3LI77	160 aa		4.09	□□□□□ -1.75
ARHGEF9-238	ENST00000639092	ALMS1	Q8TCU4	4167 aa		4.09	□□□□□ -1.75
ARHGEF9-238	ENST00000639092	AKAP9	Q99996	3911 aa		4.09	□□□□□ -1.75
ARHGEF9-238	ENST00000639092	KRTAP12-2	P59991	146 aa		4.09	□□□□□ -1.75
ARHGEF9-238	ENST00000639092	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.08	□□□□□ -1.76
ARHGEF9-238	ENST00000639092	KRTAP12-1	P59990	96 aa		4.08	□□□□□ -1.76
ARHGEF9-238	ENST00000639092	CSMD3	Q7Z407	3707 aa		4.08	□□□□□ -1.76
ARHGEF9-238	ENST00000639092	TRRAP	Q9Y4A5	3859 aa		4.04	□□□□□ -1.76
ARHGEF9-238	ENST00000639092	KRTAP10-6	P60371	365 aa	Predicted RBP	4	□□□□□ -1.77
ARHGEF9-238	ENST00000639092	DNAH9	Q9NYC9	4486 aa		3.97	□□□□□ -1.77
ARHGEF9-238	ENST00000639092	DNAH10	Q8IVF4	4471 aa		3.89	□□□□□ -1.79
ARHGEF9-238	ENST00000639092	KRTAP4-5	Q9BYR2	181 aa		3.89	□□□□□ -1.79
ARHGEF9-238	ENST00000639092	DNAH1	Q9P2D7	4330 aa		3.89	□□□□□ -1.79
ARHGEF9-238	ENST00000639092	KRTAP15-1	Q3LI76	137 aa		3.88	□□□□□ -1.79
ARHGEF9-238	ENST00000639092	KRTAP3-3	Q9BYR6	98 aa		3.88	□□□□□ -1.79

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