RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 ATP6V1DQ9Y5K8 247 aa-0.45□□□□□ -2.48
CCDC7-211ENST00000638889 BRCA2P51587 3418 aa-0.45□□□□□ -2.48
CCDC7-211ENST00000638889 PARP4Q9UKK3 1724 aaKnown RBP-0.45□□□□□ -2.48
CCDC7-211ENST00000638889 CRYBG1Q9Y4K1 1723 aa-0.45□□□□□ -2.48
CCDC7-211ENST00000638889 NEXMIFQ5QGS0 1516 aa-0.45□□□□□ -2.48
CCDC7-211ENST00000638889 ABCC2Q92887 1545 aa-0.45□□□□□ -2.48
CCDC7-211ENST00000638889 MUC22E2RYF6 1773 aaPredicted RBP-0.45□□□□□ -2.48
CCDC7-211ENST00000638889 THOC2Q8NI27 1593 aaKnown RBP-0.45□□□□□ -2.48
CCDC7-211ENST00000638889 KTN1Q86UP2 1357 aaKnown RBP-0.45□□□□□ -2.48
CCDC7-211ENST00000638889 CAMSAP1Q5T5Y3 1602 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 VPS8Q8N3P4 1428 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 MYOM1P52179 1685 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 CUL7Q14999 1698 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 MYH4Q9Y623 1939 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 RAPGEF2Q9Y4G8 1499 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 PHLPP1O60346 1717 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 KIAA1551Q9HCM1 1747 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 NWD2Q9ULI1 1742 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 A0A096LNI7 61 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 A0A1B0GV72 72 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 PVALEFA0A1B0GWK0 134 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 CEBPZOSA8MTT3 80 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 GNGT2O14610 69 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 SNAPC5O75971 98 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 HMGN2P05204 90 aaKnown RBP-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 FABP1P07148 127 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 AKAIN1P0CW23 69 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 FAUP35544 74 aaKnown RBP-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 DEFB131AP59861 70 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 ARPC4P59998 168 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 NREPQ16612 68 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 COL5A1-AS1Q5SY13 56 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 PYDC1Q8WXC3 89 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 HOPXQ9BPY8 73 aaPredicted RBP-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 SMIM2Q9BVW6 85 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 KCNQ1DNQ9H478 68 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 NWD1Q149M9 1564 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 NUP210LQ5VU65 1888 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 PREX2Q70Z35 1606 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 NRXN3Q9Y4C0 1643 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 KIF1AQ12756 1690 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 ROBO1Q9Y6N7 1651 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 CDH23Q9H251 3354 aa-0.46□□□□□ -2.48
CCDC7-211ENST00000638889 HFM1A2PYH4 1435 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 NAIPQ13075 1403 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 FANCAO15360 1455 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 RALGAPBQ86X10 1494 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 A0A1B0GUL6 1792 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 KIF20BQ96Q89 1820 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 A0A087WXM4 84 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 MYMXA0A1B0GTQ4 84 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 CTXN2P0C2S0 81 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 ENHOQ6UWT2 76 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 CENPHQ9H3R5 247 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 TMEM167BQ9NRX6 74 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 IER3IP1Q9Y5U9 82 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 TARBP1Q13395 1621 aaKnown RBP-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 ZC3H13Q5T200 1668 aaKnown RBP-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 ADGBQ8N7X0 1667 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 TOPAZ1Q8N9V7 1692 aa-0.47□□□□□ -2.48
CCDC7-211ENST00000638889 SUPT6HQ7KZ85 1726 aaKnown RBP-0.47□□□□□ -2.49
CCDC7-211ENST00000638889 MON2Q7Z3U7 1717 aa-0.47□□□□□ -2.49
CCDC7-211ENST00000638889 UBR1Q8IWV7 1749 aa-0.47□□□□□ -2.49
CCDC7-211ENST00000638889 ANKARQ7Z5J8 1434 aa-0.47□□□□□ -2.49
CCDC7-211ENST00000638889 CCDC88BA6NC98 1476 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 MYOM2P54296 1465 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 ARHGAP35Q9NRY4 1499 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 NRXN1Q9ULB1 1477 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 TOP2BQ02880 1626 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 PLCH1Q4KWH8 1693 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 ITSN2Q9NZM3 1697 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 XIRP2A4UGR9 3374 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 E5RI56 91 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 GNG7O60262 68 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 GYPAP02724 150 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 NBEAP1P0C6P0 100 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 SELENOWP63302 87 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 S100A12P80511 92 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 LINC01556Q5JQF7 62 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 LINC01590Q5TEZ4 76 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 LINC00308Q8TCZ7 52 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 TSC22D3Q99576 134 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 DDA1Q9BW61 102 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 SNHG12Q9BXW3 62 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 LINC00470Q9BZP3 86 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 CEP152O94986 1710 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 SPHKAPQ2M3C7 1700 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 LRRIQ1Q96JM4 1722 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 PZPP20742 1482 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 ABCC6O95255 1503 aa-0.48□□□□□ -2.49
CCDC7-211ENST00000638889 SYNMO15061 1565 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 NESP48681 1621 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 SCRIBQ14160 1630 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 MAP3K4Q9Y6R4 1608 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 C5P01031 1676 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 SCN7AQ01118 1682 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 CHD1O14646 1710 aa-0.49□□□□□ -2.49
CCDC7-211ENST00000638889 QSER1Q2KHR3 1735 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms