RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 RETNLBQ9BQ08 111 aa7.65□□□□□ -1.18
SCN8A-215ENST00000638820 KRTAP10-4P60372 401 aaPredicted RBP7.65□□□□□ -1.18
SCN8A-215ENST00000638820 APOBP04114 4563 aaKnown RBP7.65□□□□□ -1.18
SCN8A-215ENST00000638820 KIAA1109Q2LD37 5005 aa7.65□□□□□ -1.19
SCN8A-215ENST00000638820 SNURFQ9Y675 71 aa7.65□□□□□ -1.19
SCN8A-215ENST00000638820 LINC00313P59037 77 aa7.64□□□□□ -1.19
SCN8A-215ENST00000638820 MP68P56378 58 aa7.62□□□□□ -1.19
SCN8A-215ENST00000638820 MMP24-AS1A0A0U1RRL7 71 aa7.61□□□□□ -1.19
SCN8A-215ENST00000638820 MRPL34Q9BQ48 92 aaKnown RBP7.6□□□□□ -1.19
SCN8A-215ENST00000638820 NOTCH2NLQ7Z3S9 236 aa7.59□□□□□ -1.19
SCN8A-215ENST00000638820 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
SCN8A-215ENST00000638820 C8orf87E5RJ46 101 aa7.58□□□□□ -1.2
SCN8A-215ENST00000638820 TMEM254Q8TBM7 123 aa7.58□□□□□ -1.2
SCN8A-215ENST00000638820 Q5XG85 94 aa7.57□□□□□ -1.2
SCN8A-215ENST00000638820 OCR1Q9BZK8 76 aa7.57□□□□□ -1.2
SCN8A-215ENST00000638820 C9orf92A6NGG3 77 aa7.57□□□□□ -1.2
SCN8A-215ENST00000638820 LINC00208Q96KT6 92 aa7.57□□□□□ -1.2
SCN8A-215ENST00000638820 H0Y9P7 68 aa7.55□□□□□ -1.2
SCN8A-215ENST00000638820 KRTAP29-1A8MX34 341 aaPredicted RBP7.54□□□□□ -1.2
SCN8A-215ENST00000638820 C5orf47Q569G3 176 aa7.54□□□□□ -1.2
SCN8A-215ENST00000638820 RPS29P62273 56 aaKnown RBP7.52□□□□□ -1.21
SCN8A-215ENST00000638820 TP53AIP1Q9HCN2 124 aa7.52□□□□□ -1.21
SCN8A-215ENST00000638820 TRAV22A0A0B4J277 110 aa7.51□□□□□ -1.21
SCN8A-215ENST00000638820 J3QL48 77 aa7.51□□□□□ -1.21
SCN8A-215ENST00000638820 EPPK1P58107 5090 aaKnown RBP7.51□□□□□ -1.21
SCN8A-215ENST00000638820 PRR4Q16378 134 aa7.51□□□□□ -1.21
SCN8A-215ENST00000638820 RYR1P21817 5038 aa7.51□□□□□ -1.21
SCN8A-215ENST00000638820 HSPG2P98160 4391 aa7.48□□□□□ -1.21
SCN8A-215ENST00000638820 C1orf64Q8NEQ6 169 aa7.48□□□□□ -1.21
SCN8A-215ENST00000638820 KRTAP10-8P60410 259 aa7.47□□□□□ -1.21
SCN8A-215ENST00000638820 KRTAP17-1Q9BYP8 105 aa7.46□□□□□ -1.22
SCN8A-215ENST00000638820 LRP1Q07954 4544 aaKnown RBP7.45□□□□□ -1.22
SCN8A-215ENST00000638820 PCOTHQ58A44 107 aa7.45□□□□□ -1.22
SCN8A-215ENST00000638820 CYSTM1Q9H1C7 97 aa7.45□□□□□ -1.22
SCN8A-215ENST00000638820 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
SCN8A-215ENST00000638820 IGLV7-46A0A075B6I9 117 aa7.44□□□□□ -1.22
SCN8A-215ENST00000638820 KLKP1Q107X0 134 aa7.44□□□□□ -1.22
SCN8A-215ENST00000638820 NDUFC1O43677 76 aa7.43□□□□□ -1.22
SCN8A-215ENST00000638820 OXTP01178 125 aa7.41□□□□□ -1.22
SCN8A-215ENST00000638820 IGKV2D-30A0A075B6S6 120 aa7.41□□□□□ -1.22
SCN8A-215ENST00000638820 A0A0U1RQV1 116 aa7.41□□□□□ -1.22
SCN8A-215ENST00000638820 IGKV2-30P06310 120 aa7.41□□□□□ -1.22
SCN8A-215ENST00000638820 TMEM258P61165 79 aa7.39□□□□□ -1.23
SCN8A-215ENST00000638820 FAM236DA0A1B0GTK5 79 aa7.39□□□□□ -1.23
SCN8A-215ENST00000638820 FAM236CP0DP71 79 aa7.39□□□□□ -1.23
SCN8A-215ENST00000638820 MYCBP2O75592 4640 aa7.38□□□□□ -1.23
SCN8A-215ENST00000638820 H3BPC8 53 aa7.37□□□□□ -1.23
SCN8A-215ENST00000638820 H7BZZ5 65 aa7.37□□□□□ -1.23
SCN8A-215ENST00000638820 Q5W150 140 aa7.36□□□□□ -1.23
SCN8A-215ENST00000638820 Q8N9P0 234 aaPredicted RBP7.35□□□□□ -1.23
SCN8A-215ENST00000638820 MT1HL1P0DM35 61 aa7.34□□□□□ -1.23
SCN8A-215ENST00000638820 FP248Q71RG6 208 aaPredicted RBP7.34□□□□□ -1.23
SCN8A-215ENST00000638820 LOC101927531A0A1B0GV80 90 aa7.33□□□□□ -1.24
SCN8A-215ENST00000638820 ATP11AUNQ6ZP68 121 aa7.31□□□□□ -1.24
SCN8A-215ENST00000638820 KRTAP16-1A8MUX0 517 aa7.31□□□□□ -1.24
SCN8A-215ENST00000638820 ZCCHC13Q8WW36 166 aaKnown RBP7.29□□□□□ -1.24
SCN8A-215ENST00000638820 ATP5EP56381 51 aaPredicted RBP7.25□□□□□ -1.25
SCN8A-215ENST00000638820 CYP4F30PQ9H0H9 118 aa7.24□□□□□ -1.25
SCN8A-215ENST00000638820 C7orf65Q6ZTY9 151 aa7.23□□□□□ -1.25
SCN8A-215ENST00000638820 PKHD1L1Q86WI1 4243 aa7.22□□□□□ -1.25
SCN8A-215ENST00000638820 A8MUU9 505 aa7.21□□□□□ -1.25
SCN8A-215ENST00000638820 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.25
SCN8A-215ENST00000638820 BIRC6Q9NR09 4857 aa7.2□□□□□ -1.26
SCN8A-215ENST00000638820 HERC2O95714 4834 aa7.2□□□□□ -1.26
SCN8A-215ENST00000638820 FAT3Q8TDW7 4589 aa7.19□□□□□ -1.26
SCN8A-215ENST00000638820 Q75L30 129 aa7.19□□□□□ -1.26
SCN8A-215ENST00000638820 KRTAP13-3Q3SY46 172 aa7.18□□□□□ -1.26
SCN8A-215ENST00000638820 HRES1P13985 223 aa7.17□□□□□ -1.26
SCN8A-215ENST00000638820 XP32Q5T750 250 aa7.17□□□□□ -1.26
SCN8A-215ENST00000638820 SERP1Q9Y6X1 66 aa7.17□□□□□ -1.26
SCN8A-215ENST00000638820 SPINK7P58062 85 aa7.16□□□□□ -1.26
SCN8A-215ENST00000638820 CHKB-CPT1BH3BT56 60 aa7.16□□□□□ -1.26
SCN8A-215ENST00000638820 SPANXA2-OT1Q8N9U9 137 aa7.15□□□□□ -1.26
SCN8A-215ENST00000638820 C4orf26Q17RF5 130 aa7.15□□□□□ -1.27
SCN8A-215ENST00000638820 RPL37P61927 97 aaKnown RBP7.14□□□□□ -1.27
SCN8A-215ENST00000638820 TNXBP22105 4242 aa7.13□□□□□ -1.27
SCN8A-215ENST00000638820 ABCA13Q86UQ4 5058 aa7.12□□□□□ -1.27
SCN8A-215ENST00000638820 TPRXLQ17RH7 258 aa7.11□□□□□ -1.27
SCN8A-215ENST00000638820 ACYP2P14621 99 aa7.09□□□□□ -1.27
SCN8A-215ENST00000638820 MPLKIPQ8TAP9 179 aa7.08□□□□□ -1.28
SCN8A-215ENST00000638820 COA5Q86WW8 74 aa7.07□□□□□ -1.28
SCN8A-215ENST00000638820 RPS28P62857 69 aaKnown RBP7.06□□□□□ -1.28
SCN8A-215ENST00000638820 SMIM26A0A096LP01 95 aa7.03□□□□□ -1.28
SCN8A-215ENST00000638820 SEC61BP60468 96 aaKnown RBP7.02□□□□□ -1.29
SCN8A-215ENST00000638820 DMAC1Q96GE9 116 aa6.98□□□□□ -1.29
SCN8A-215ENST00000638820 SEC61GP60059 68 aa6.94□□□□□ -1.3
SCN8A-215ENST00000638820 RBM12B-AS1Q9P1G2 102 aa6.93□□□□□ -1.3
SCN8A-215ENST00000638820 A8MUN3 132 aa6.93□□□□□ -1.3
SCN8A-215ENST00000638820 LRP2P98164 4655 aa6.93□□□□□ -1.3
SCN8A-215ENST00000638820 COX6B2Q6YFQ2 88 aa6.92□□□□□ -1.3
SCN8A-215ENST00000638820 PSPHP1O15172 72 aa6.9□□□□□ -1.31
SCN8A-215ENST00000638820 LPAP08519 4548 aa6.89□□□□□ -1.31
SCN8A-215ENST00000638820 SPTSSBQ8NFR3 76 aa6.88□□□□□ -1.31
SCN8A-215ENST00000638820 PRO0628Q9UI54 55 aa6.88□□□□□ -1.31
SCN8A-215ENST00000638820 V9GYY9 64 aa6.88□□□□□ -1.31
SCN8A-215ENST00000638820 PCLOQ9Y6V0 5065 aa6.86□□□□□ -1.31
SCN8A-215ENST00000638820 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
SCN8A-215ENST00000638820 HERC1Q15751 4861 aa6.83□□□□□ -1.32
SCN8A-215ENST00000638820 BRK1Q8WUW1 75 aa6.82□□□□□ -1.32
SCN8A-215ENST00000638820 A0A1B0GU69 56 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms