RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 TACC2O95359 2948 aa11.02□□□□□ -0.64
CACNA1A-257ENST00000638009 KRTAP1-1Q07627 177 aa11□□□□□ -0.65
CACNA1A-257ENST00000638009 SRRM2Q9UQ35 2752 aaKnown RBP11□□□□□ -0.65
CACNA1A-257ENST00000638009 UNC80Q8N2C7 3258 aa10.98□□□□□ -0.65
CACNA1A-257ENST00000638009 NOTCH2NLQ7Z3S9 236 aa10.98□□□□□ -0.65
CACNA1A-257ENST00000638009 KRTAP10-1P60331 282 aa10.97□□□□□ -0.65
CACNA1A-257ENST00000638009 ZZEF1O43149 2961 aa10.93□□□□□ -0.66
CACNA1A-257ENST00000638009 P0C880 135 aa10.92□□□□□ -0.66
CACNA1A-257ENST00000638009 KRTAP1-5Q9BYS1 174 aa10.9□□□□□ -0.67
CACNA1A-257ENST00000638009 CELSR3Q9NYQ7 3312 aa10.83□□□□□ -0.68
CACNA1A-257ENST00000638009 KRTAP10-2P60368 255 aa10.83□□□□□ -0.68
CACNA1A-257ENST00000638009 PRO2289Q9P1D8 64 aa10.83□□□□□ -0.68
CACNA1A-257ENST00000638009 Q6ZRN7 208 aaPredicted RBP10.77□□□□□ -0.69
CACNA1A-257ENST00000638009 BOD1L1Q8NFC6 3051 aa10.76□□□□□ -0.69
CACNA1A-257ENST00000638009 NBEAQ8NFP9 2946 aa10.76□□□□□ -0.69
CACNA1A-257ENST00000638009 CELSR1Q9NYQ6 3014 aa10.73□□□□□ -0.69
CACNA1A-257ENST00000638009 HTTP42858 3142 aa10.73□□□□□ -0.69
CACNA1A-257ENST00000638009 ADGRG4Q8IZF6 3080 aa10.71□□□□□ -0.69
CACNA1A-257ENST00000638009 DMXL1Q9Y485 3027 aa10.71□□□□□ -0.69
CACNA1A-257ENST00000638009 DCHS2Q6V1P9 2916 aa10.71□□□□□ -0.7
CACNA1A-257ENST00000638009 KRTAP10-8P60410 259 aa10.69□□□□□ -0.7
CACNA1A-257ENST00000638009 ATMQ13315 3056 aa10.67□□□□□ -0.7
CACNA1A-257ENST00000638009 MKI67P46013 3256 aaKnown RBP10.67□□□□□ -0.7
CACNA1A-257ENST00000638009 DNAH14Q0VDD8 3507 aa10.65□□□□□ -0.7
CACNA1A-257ENST00000638009 USP34Q70CQ2 3546 aa10.63□□□□□ -0.71
CACNA1A-257ENST00000638009 VWFP04275 2813 aa10.57□□□□□ -0.72
CACNA1A-257ENST00000638009 COL6A3P12111 3177 aa10.54□□□□□ -0.72
CACNA1A-257ENST00000638009 TENM2Q9NT68 2774 aa10.54□□□□□ -0.72
CACNA1A-257ENST00000638009 PKD1L1Q8TDX9 2849 aa10.49□□□□□ -0.73
CACNA1A-257ENST00000638009 TENM4Q6N022 2769 aa10.46□□□□□ -0.73
CACNA1A-257ENST00000638009 H0YAA0 97 aa10.44□□□□□ -0.74
CACNA1A-257ENST00000638009 KRTAP13-1Q8IUC0 172 aa10.44□□□□□ -0.74
CACNA1A-257ENST00000638009 ZANQ9Y493 2812 aa10.41□□□□□ -0.74
CACNA1A-257ENST00000638009 KRTAP13-2Q52LG2 175 aa10.4□□□□□ -0.74
CACNA1A-257ENST00000638009 FBN2P35556 2912 aa10.38□□□□□ -0.75
CACNA1A-257ENST00000638009 COL7A1Q02388 2944 aa10.36□□□□□ -0.75
CACNA1A-257ENST00000638009 LAMA3Q16787 3333 aa10.3□□□□□ -0.76
CACNA1A-257ENST00000638009 VCANP13611 3396 aa10.23□□□□□ -0.77
CACNA1A-257ENST00000638009 SPEGQ15772 3267 aa10.22□□□□□ -0.77
CACNA1A-257ENST00000638009 MXRA5Q9NR99 2828 aa10.22□□□□□ -0.77
CACNA1A-257ENST00000638009 CFAP47Q6ZTR5 3102 aa10.2□□□□□ -0.78
CACNA1A-257ENST00000638009 BRCA2P51587 3418 aa10.19□□□□□ -0.78
CACNA1A-257ENST00000638009 TPRXLQ17RH7 258 aa10.18□□□□□ -0.78
CACNA1A-257ENST00000638009 XP32Q5T750 250 aa10.13□□□□□ -0.79
CACNA1A-257ENST00000638009 KRTAP10-10P60014 251 aa10.11□□□□□ -0.79
CACNA1A-257ENST00000638009 KRTAP7-1Q8IUC3 87 aa10.06□□□□□ -0.8
CACNA1A-257ENST00000638009 SZT2Q5T011 3432 aa10.04□□□□□ -0.8
CACNA1A-257ENST00000638009 ZFHX4Q86UP3 3567 aa9.99□□□□□ -0.81
CACNA1A-257ENST00000638009 INE1O15225 51 aa9.99□□□□□ -0.81
CACNA1A-257ENST00000638009 KRTAP13-4Q3LI77 160 aa9.95□□□□□ -0.82
CACNA1A-257ENST00000638009 MEGF8Q7Z7M0 2845 aa9.89□□□□□ -0.83
CACNA1A-257ENST00000638009 A0A1B0GVY2 172 aa9.88□□□□□ -0.83
CACNA1A-257ENST00000638009 KRTAP12-2P59991 146 aa9.87□□□□□ -0.83
CACNA1A-257ENST00000638009 HRNRQ86YZ3 2850 aaPredicted RBP9.82□□□□□ -0.84
CACNA1A-257ENST00000638009 CDH23Q9H251 3354 aa9.82□□□□□ -0.84
CACNA1A-257ENST00000638009 SPTBN5Q9NRC6 3674 aaKnown RBP9.8□□□□□ -0.84
CACNA1A-257ENST00000638009 NBPF19A0A087WUL8 3843 aa9.78□□□□□ -0.84
CACNA1A-257ENST00000638009 KRTAP21-3Q3LHN1 58 aa9.78□□□□□ -0.84
CACNA1A-257ENST00000638009 OTOGQ6ZRI0 2925 aa9.74□□□□□ -0.85
CACNA1A-257ENST00000638009 KRTAP1-4P0C5Y4 121 aa9.72□□□□□ -0.85
CACNA1A-257ENST00000638009 EYSQ5T1H1 3165 aa9.68□□□□□ -0.86
CACNA1A-257ENST00000638009 KRTAP13-3Q3SY46 172 aa9.67□□□□□ -0.86
CACNA1A-257ENST00000638009 MYO15AQ9UKN7 3530 aa9.67□□□□□ -0.86
CACNA1A-257ENST00000638009 KRTAP15-1Q3LI76 137 aa9.63□□□□□ -0.87
CACNA1A-257ENST00000638009 ZFHX3Q15911 3703 aa9.61□□□□□ -0.87
CACNA1A-257ENST00000638009 WDFY3Q8IZQ1 3526 aa9.59□□□□□ -0.87
CACNA1A-257ENST00000638009 LOC400499M0QZD8 3231 aa9.54□□□□□ -0.88
CACNA1A-257ENST00000638009 ASPMQ8IZT6 3477 aa9.5□□□□□ -0.89
CACNA1A-257ENST00000638009 FBN3Q75N90 2809 aa9.5□□□□□ -0.89
CACNA1A-257ENST00000638009 KRTAP12-1P59990 96 aa9.49□□□□□ -0.89
CACNA1A-257ENST00000638009 LAMA5O15230 3695 aa9.42□□□□□ -0.9
CACNA1A-257ENST00000638009 FBN1P35555 2871 aaKnown RBP9.29□□□□□ -0.92
CACNA1A-257ENST00000638009 SMG1Q96Q15 3661 aaKnown RBP9.28□□□□□ -0.92
CACNA1A-257ENST00000638009 RELNP78509 3460 aa9.26□□□□□ -0.93
CACNA1A-257ENST00000638009 SPENQ96T58 3664 aaKnown RBP9.25□□□□□ -0.93
CACNA1A-257ENST00000638009 DMDP11532 3685 aa9.12□□□□□ -0.95
CACNA1A-257ENST00000638009 DCHS1Q96JQ0 3298 aa9.02□□□□□ -0.97
CACNA1A-257ENST00000638009 KRTAP23-1A1A580 65 aa9.01□□□□□ -0.97
CACNA1A-257ENST00000638009 KRTAP10-12P60413 245 aa9□□□□□ -0.97
CACNA1A-257ENST00000638009 CSMD1Q96PZ7 3565 aa8.91□□□□□ -0.98
CACNA1A-257ENST00000638009 TRRAPQ9Y4A5 3859 aa8.84□□□□□ -0.99
CACNA1A-257ENST00000638009 AKAP9Q99996 3911 aa8.84□□□□□ -0.99
CACNA1A-257ENST00000638009 VPS13CQ709C8 3753 aa8.81□□□□□ -1
CACNA1A-257ENST00000638009 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
CACNA1A-257ENST00000638009 KRTAP3-1Q9BYR8 98 aa8.7□□□□□ -1.02
CACNA1A-257ENST00000638009 KRTAP12-3P60328 96 aa8.69□□□□□ -1.02
CACNA1A-257ENST00000638009 CRCT1Q9UGL9 99 aa8.66□□□□□ -1.02
CACNA1A-257ENST00000638009 CUBNO60494 3623 aa8.65□□□□□ -1.02
CACNA1A-257ENST00000638009 CSMD3Q7Z407 3707 aa8.56□□□□□ -1.04
CACNA1A-257ENST00000638009 MUC3AQ02505 3323 aa8.54□□□□□ -1.04
CACNA1A-257ENST00000638009 KRTAP10-5P60370 271 aa8.4□□□□□ -1.07
CACNA1A-257ENST00000638009 SVEP1Q4LDE5 3571 aa8.36□□□□□ -1.07
CACNA1A-257ENST00000638009 ALMS1Q8TCU4 4167 aa8.32□□□□□ -1.08
CACNA1A-257ENST00000638009 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
CACNA1A-257ENST00000638009 CSMD2Q7Z408 3487 aa8.24□□□□□ -1.09
CACNA1A-257ENST00000638009 LCE3AQ5TA76 89 aa8.21□□□□□ -1.09
CACNA1A-257ENST00000638009 LYSTQ99698 3801 aa8.2□□□□□ -1.1
CACNA1A-257ENST00000638009 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
CACNA1A-257ENST00000638009 BSNQ9UPA5 3926 aa8.12□□□□□ -1.11
CACNA1A-257ENST00000638009 KRTAP8-1Q8IUC2 63 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms