RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 VPS13BQ7Z7G8 4022 aa10.83□□□□□ -0.68
CTSD-212ENST00000637815 FAM229BQ4G0N7 80 aa10.82□□□□□ -0.68
CTSD-212ENST00000637815 C1orf64Q8NEQ6 169 aa10.82□□□□□ -0.68
CTSD-212ENST00000637815 SACSQ9NZJ4 4579 aa10.82□□□□□ -0.68
CTSD-212ENST00000637815 A0A087X002 238 aa10.8□□□□□ -0.68
CTSD-212ENST00000637815 MRPL34Q9BQ48 92 aaKnown RBP10.8□□□□□ -0.68
CTSD-212ENST00000637815 KRTAP13-2Q52LG2 175 aa10.79□□□□□ -0.68
CTSD-212ENST00000637815 NOTCH2NLQ7Z3S9 236 aa10.79□□□□□ -0.68
CTSD-212ENST00000637815 SPANXA2-OT1Q8N9U9 137 aa10.79□□□□□ -0.68
CTSD-212ENST00000637815 SPINK6Q6UWN8 80 aa10.77□□□□□ -0.68
CTSD-212ENST00000637815 PKHD1P08F94 4074 aa10.76□□□□□ -0.69
CTSD-212ENST00000637815 KRTAP1-4P0C5Y4 121 aa10.75□□□□□ -0.69
CTSD-212ENST00000637815 PRR4Q16378 134 aa10.75□□□□□ -0.69
CTSD-212ENST00000637815 NDUFS5O43920 106 aa10.74□□□□□ -0.69
CTSD-212ENST00000637815 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
CTSD-212ENST00000637815 C1orf195Q5TG92 126 aa10.65□□□□□ -0.7
CTSD-212ENST00000637815 MPLKIPQ8TAP9 179 aa10.65□□□□□ -0.71
CTSD-212ENST00000637815 IGLV7-46A0A075B6I9 117 aa10.64□□□□□ -0.71
CTSD-212ENST00000637815 LINC00336Q6ZUF6 198 aa10.63□□□□□ -0.71
CTSD-212ENST00000637815 KRTAP13-3Q3SY46 172 aa10.62□□□□□ -0.71
CTSD-212ENST00000637815 PCOTHQ58A44 107 aa10.61□□□□□ -0.71
CTSD-212ENST00000637815 LIMD2Q9BT23 127 aa10.61□□□□□ -0.71
CTSD-212ENST00000637815 PLA2G1BP04054 148 aaKnown RBP10.6□□□□□ -0.71
CTSD-212ENST00000637815 DYNC1H1Q14204 4646 aaKnown RBP10.6□□□□□ -0.71
CTSD-212ENST00000637815 LINC00313P59037 77 aa10.6□□□□□ -0.71
CTSD-212ENST00000637815 Q1T7F1 81 aa10.59□□□□□ -0.71
CTSD-212ENST00000637815 Q5W150 140 aa10.58□□□□□ -0.72
CTSD-212ENST00000637815 LOC101927531A0A1B0GV80 90 aa10.57□□□□□ -0.72
CTSD-212ENST00000637815 TYMSOSQ8TAI1 123 aa10.56□□□□□ -0.72
CTSD-212ENST00000637815 Q8N9P0 234 aaPredicted RBP10.55□□□□□ -0.72
CTSD-212ENST00000637815 A0A1B0GVY2 172 aa10.55□□□□□ -0.72
CTSD-212ENST00000637815 C4orf48Q5BLP8 95 aa10.53□□□□□ -0.72
CTSD-212ENST00000637815 SPINK1P00995 79 aa10.52□□□□□ -0.73
CTSD-212ENST00000637815 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
CTSD-212ENST00000637815 APOBP04114 4563 aaKnown RBP10.51□□□□□ -0.73
CTSD-212ENST00000637815 COA5Q86WW8 74 aa10.5□□□□□ -0.73
CTSD-212ENST00000637815 FAM229AH3BQW9 127 aa10.48□□□□□ -0.73
CTSD-212ENST00000637815 V9GYY9 64 aa10.46□□□□□ -0.74
CTSD-212ENST00000637815 RYR2Q92736 4967 aa10.46□□□□□ -0.74
CTSD-212ENST00000637815 RPS29P62273 56 aaKnown RBP10.45□□□□□ -0.74
CTSD-212ENST00000637815 PRR26Q8N8Z3 221 aa10.45□□□□□ -0.74
CTSD-212ENST00000637815 SMR3BP02814 79 aaPredicted RBP10.44□□□□□ -0.74
CTSD-212ENST00000637815 LINC00304Q8N9R0 145 aa10.43□□□□□ -0.74
CTSD-212ENST00000637815 FAT1Q14517 4588 aa10.42□□□□□ -0.74
CTSD-212ENST00000637815 PKHD1L1Q86WI1 4243 aa10.42□□□□□ -0.74
CTSD-212ENST00000637815 KRTAP10-4P60372 401 aaPredicted RBP10.41□□□□□ -0.74
CTSD-212ENST00000637815 SPAG11AQ6PDA7 123 aa10.41□□□□□ -0.74
CTSD-212ENST00000637815 PRO0628Q9UI54 55 aa10.4□□□□□ -0.74
CTSD-212ENST00000637815 HRES1P13985 223 aa10.38□□□□□ -0.75
CTSD-212ENST00000637815 PSPHP1O15172 72 aa10.38□□□□□ -0.75
CTSD-212ENST00000637815 IGKV2-30P06310 120 aa10.37□□□□□ -0.75
CTSD-212ENST00000637815 BRK1Q8WUW1 75 aa10.35□□□□□ -0.75
CTSD-212ENST00000637815 RETNLBQ9BQ08 111 aa10.35□□□□□ -0.75
CTSD-212ENST00000637815 KMT2CQ8NEZ4 4911 aaKnown RBP10.35□□□□□ -0.75
CTSD-212ENST00000637815 A8MUN3 132 aa10.34□□□□□ -0.75
CTSD-212ENST00000637815 Q5VV11 94 aa10.3□□□□□ -0.76
CTSD-212ENST00000637815 DMAC1Q96GE9 116 aa10.28□□□□□ -0.76
CTSD-212ENST00000637815 ACYP2P14621 99 aa10.27□□□□□ -0.77
CTSD-212ENST00000637815 PRR15LQ9BU68 103 aa10.24□□□□□ -0.77
CTSD-212ENST00000637815 LINC01558Q9Y6Z2 57 aa10.23□□□□□ -0.77
CTSD-212ENST00000637815 IGKV2D-30A0A075B6S6 120 aa10.21□□□□□ -0.78
CTSD-212ENST00000637815 Q75L30 129 aa10.19□□□□□ -0.78
CTSD-212ENST00000637815 CHKB-CPT1BH3BT56 60 aa10.16□□□□□ -0.78
CTSD-212ENST00000637815 C20orf166-AS1Q96NR2 134 aa10.12□□□□□ -0.79
CTSD-212ENST00000637815 A8MUU9 505 aa10.12□□□□□ -0.79
CTSD-212ENST00000637815 C7orf65Q6ZTY9 151 aa10.12□□□□□ -0.79
CTSD-212ENST00000637815 HSPG2P98160 4391 aa10.11□□□□□ -0.79
CTSD-212ENST00000637815 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
CTSD-212ENST00000637815 C9orf92A6NGG3 77 aa10.09□□□□□ -0.79
CTSD-212ENST00000637815 TNXBP22105 4242 aa10.09□□□□□ -0.79
CTSD-212ENST00000637815 RYR3Q15413 4870 aa10.03□□□□□ -0.8
CTSD-212ENST00000637815 A6NED7 52 aa10.03□□□□□ -0.8
CTSD-212ENST00000637815 LRP1Q07954 4544 aaKnown RBP10.02□□□□□ -0.81
CTSD-212ENST00000637815 A8MU10 97 aa10.02□□□□□ -0.81
CTSD-212ENST00000637815 Q5VSD8 79 aa10.01□□□□□ -0.81
CTSD-212ENST00000637815 FAT3Q8TDW7 4589 aa10.01□□□□□ -0.81
CTSD-212ENST00000637815 Q8N1X5 172 aa10□□□□□ -0.81
CTSD-212ENST00000637815 KRTAP10-8P60410 259 aa10□□□□□ -0.81
CTSD-212ENST00000637815 LCA10Q71F78 164 aa9.98□□□□□ -0.81
CTSD-212ENST00000637815 RYR1P21817 5038 aa9.98□□□□□ -0.81
CTSD-212ENST00000637815 CDC42SE1Q9NRR8 79 aa9.95□□□□□ -0.82
CTSD-212ENST00000637815 SPINK7P58062 85 aa9.94□□□□□ -0.82
CTSD-212ENST00000637815 A0A1B0GU69 56 aa9.89□□□□□ -0.83
CTSD-212ENST00000637815 ATP11AUNQ6ZP68 121 aa9.87□□□□□ -0.83
CTSD-212ENST00000637815 KRTAP17-1Q9BYP8 105 aa9.86□□□□□ -0.83
CTSD-212ENST00000637815 KRTAP3-1Q9BYR8 98 aa9.81□□□□□ -0.84
CTSD-212ENST00000637815 DMBT1Q9UGM3 2413 aaPredicted RBP9.81□□□□□ -0.84
CTSD-212ENST00000637815 SPTSSBQ8NFR3 76 aa9.8□□□□□ -0.84
CTSD-212ENST00000637815 PMAIP1Q13794 54 aa9.78□□□□□ -0.84
CTSD-212ENST00000637815 KIAA1109Q2LD37 5005 aa9.78□□□□□ -0.84
CTSD-212ENST00000637815 MT1HL1P0DM35 61 aa9.74□□□□□ -0.85
CTSD-212ENST00000637815 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
CTSD-212ENST00000637815 RPL37P61927 97 aaKnown RBP9.73□□□□□ -0.85
CTSD-212ENST00000637815 COX6B2Q6YFQ2 88 aa9.71□□□□□ -0.86
CTSD-212ENST00000637815 XP32Q5T750 250 aa9.7□□□□□ -0.86
CTSD-212ENST00000637815 UQCR11O14957 56 aa9.69□□□□□ -0.86
CTSD-212ENST00000637815 SPATA8Q6RVD6 105 aa9.69□□□□□ -0.86
CTSD-212ENST00000637815 A6NN06 94 aa9.68□□□□□ -0.86
CTSD-212ENST00000637815 SEC61GP60059 68 aa9.65□□□□□ -0.87
CTSD-212ENST00000637815 EPPK1P58107 5090 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms