RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 TACC2O95359 2948 aa10.24□□□□□ -0.77
CACNA1A-247ENST00000637769 C10orf95Q9H7T3 257 aa10.21□□□□□ -0.77
CACNA1A-247ENST00000637769 TNRC18O15417 2968 aaPredicted RBP10.2□□□□□ -0.78
CACNA1A-247ENST00000637769 LAMA1P25391 3075 aa10.17□□□□□ -0.78
CACNA1A-247ENST00000637769 A8MU10 97 aa10.16□□□□□ -0.78
CACNA1A-247ENST00000637769 ZZEF1O43149 2961 aa10.15□□□□□ -0.78
CACNA1A-247ENST00000637769 DNAH14Q0VDD8 3507 aa10.14□□□□□ -0.79
CACNA1A-247ENST00000637769 UNC80Q8N2C7 3258 aa10.14□□□□□ -0.79
CACNA1A-247ENST00000637769 TGP01266 2768 aa10.13□□□□□ -0.79
CACNA1A-247ENST00000637769 PDZD2O15018 2839 aa10.13□□□□□ -0.79
CACNA1A-247ENST00000637769 KRTAP11-1Q8IUC1 163 aa10.12□□□□□ -0.79
CACNA1A-247ENST00000637769 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-247ENST00000637769 NBEAQ8NFP9 2946 aa10.05□□□□□ -0.8
CACNA1A-247ENST00000637769 DCHS2Q6V1P9 2916 aa10.04□□□□□ -0.8
CACNA1A-247ENST00000637769 BRCA2P51587 3418 aa10.02□□□□□ -0.81
CACNA1A-247ENST00000637769 HTTP42858 3142 aa10□□□□□ -0.81
CACNA1A-247ENST00000637769 USP34Q70CQ2 3546 aa9.98□□□□□ -0.81
CACNA1A-247ENST00000637769 BOD1L1Q8NFC6 3051 aa9.97□□□□□ -0.81
CACNA1A-247ENST00000637769 TENM4Q6N022 2769 aa9.97□□□□□ -0.81
CACNA1A-247ENST00000637769 LAMA3Q16787 3333 aa9.95□□□□□ -0.82
CACNA1A-247ENST00000637769 PRO2289Q9P1D8 64 aa9.93□□□□□ -0.82
CACNA1A-247ENST00000637769 KRTAP13-1Q8IUC0 172 aa9.93□□□□□ -0.82
CACNA1A-247ENST00000637769 KRTAP13-2Q52LG2 175 aa9.87□□□□□ -0.83
CACNA1A-247ENST00000637769 COL6A3P12111 3177 aa9.86□□□□□ -0.83
CACNA1A-247ENST00000637769 ZANQ9Y493 2812 aa9.85□□□□□ -0.83
CACNA1A-247ENST00000637769 KRTAP10-8P60410 259 aa9.82□□□□□ -0.84
CACNA1A-247ENST00000637769 CDH23Q9H251 3354 aa9.8□□□□□ -0.84
CACNA1A-247ENST00000637769 P0C880 135 aa9.79□□□□□ -0.84
CACNA1A-247ENST00000637769 CELSR1Q9NYQ6 3014 aa9.79□□□□□ -0.84
CACNA1A-247ENST00000637769 DMXL1Q9Y485 3027 aa9.78□□□□□ -0.84
CACNA1A-247ENST00000637769 ATMQ13315 3056 aa9.78□□□□□ -0.84
CACNA1A-247ENST00000637769 ADGRG4Q8IZF6 3080 aa9.78□□□□□ -0.84
CACNA1A-247ENST00000637769 VWFP04275 2813 aa9.75□□□□□ -0.85
CACNA1A-247ENST00000637769 FBN2P35556 2912 aa9.74□□□□□ -0.85
CACNA1A-247ENST00000637769 SPEGQ15772 3267 aa9.74□□□□□ -0.85
CACNA1A-247ENST00000637769 PKD1L1Q8TDX9 2849 aa9.73□□□□□ -0.85
CACNA1A-247ENST00000637769 CFAP47Q6ZTR5 3102 aa9.71□□□□□ -0.86
CACNA1A-247ENST00000637769 KRTAP7-1Q8IUC3 87 aa9.65□□□□□ -0.87
CACNA1A-247ENST00000637769 SRRM2Q9UQ35 2752 aaKnown RBP9.64□□□□□ -0.87
CACNA1A-247ENST00000637769 VCANP13611 3396 aa9.63□□□□□ -0.87
CACNA1A-247ENST00000637769 H0YAA0 97 aa9.62□□□□□ -0.87
CACNA1A-247ENST00000637769 TPRXLQ17RH7 258 aa9.6□□□□□ -0.87
CACNA1A-247ENST00000637769 KRTAP21-3Q3LHN1 58 aa9.59□□□□□ -0.87
CACNA1A-247ENST00000637769 SZT2Q5T011 3432 aa9.59□□□□□ -0.87
CACNA1A-247ENST00000637769 XP32Q5T750 250 aa9.56□□□□□ -0.88
CACNA1A-247ENST00000637769 MXRA5Q9NR99 2828 aa9.53□□□□□ -0.88
CACNA1A-247ENST00000637769 TENM2Q9NT68 2774 aa9.46□□□□□ -0.9
CACNA1A-247ENST00000637769 HRNRQ86YZ3 2850 aaPredicted RBP9.43□□□□□ -0.9
CACNA1A-247ENST00000637769 WDFY3Q8IZQ1 3526 aa9.42□□□□□ -0.9
CACNA1A-247ENST00000637769 KRTAP10-10P60014 251 aa9.42□□□□□ -0.9
CACNA1A-247ENST00000637769 COL7A1Q02388 2944 aa9.41□□□□□ -0.9
CACNA1A-247ENST00000637769 A0A1B0GVY2 172 aa9.32□□□□□ -0.92
CACNA1A-247ENST00000637769 KRTAP1-4P0C5Y4 121 aa9.3□□□□□ -0.92
CACNA1A-247ENST00000637769 SPTBN5Q9NRC6 3674 aaKnown RBP9.29□□□□□ -0.92
CACNA1A-247ENST00000637769 ASPMQ8IZT6 3477 aa9.28□□□□□ -0.92
CACNA1A-247ENST00000637769 MYO15AQ9UKN7 3530 aa9.23□□□□□ -0.93
CACNA1A-247ENST00000637769 EYSQ5T1H1 3165 aa9.22□□□□□ -0.93
CACNA1A-247ENST00000637769 ZFHX4Q86UP3 3567 aa9.18□□□□□ -0.94
CACNA1A-247ENST00000637769 KRTAP13-3Q3SY46 172 aa9.17□□□□□ -0.94
CACNA1A-247ENST00000637769 NBPF19A0A087WUL8 3843 aa9.16□□□□□ -0.94
CACNA1A-247ENST00000637769 KRTAP13-4Q3LI77 160 aa9.15□□□□□ -0.94
CACNA1A-247ENST00000637769 LAMA5O15230 3695 aa9.14□□□□□ -0.95
CACNA1A-247ENST00000637769 LOC400499M0QZD8 3231 aa9.13□□□□□ -0.95
CACNA1A-247ENST00000637769 MEGF8Q7Z7M0 2845 aa9.09□□□□□ -0.95
CACNA1A-247ENST00000637769 KRTAP12-2P59991 146 aa8.99□□□□□ -0.97
CACNA1A-247ENST00000637769 DCHS1Q96JQ0 3298 aa8.99□□□□□ -0.97
CACNA1A-247ENST00000637769 INE1O15225 51 aa8.92□□□□□ -0.98
CACNA1A-247ENST00000637769 ZFHX3Q15911 3703 aa8.89□□□□□ -0.99
CACNA1A-247ENST00000637769 RELNP78509 3460 aa8.85□□□□□ -0.99
CACNA1A-247ENST00000637769 SPENQ96T58 3664 aaKnown RBP8.85□□□□□ -0.99
CACNA1A-247ENST00000637769 FBN3Q75N90 2809 aa8.84□□□□□ -0.99
CACNA1A-247ENST00000637769 FBN1P35555 2871 aaKnown RBP8.82□□□□□ -1
CACNA1A-247ENST00000637769 CSMD1Q96PZ7 3565 aa8.81□□□□□ -1
CACNA1A-247ENST00000637769 SMG1Q96Q15 3661 aaKnown RBP8.8□□□□□ -1
CACNA1A-247ENST00000637769 KRTAP12-1P59990 96 aa8.8□□□□□ -1
CACNA1A-247ENST00000637769 KRTAP15-1Q3LI76 137 aa8.8□□□□□ -1
CACNA1A-247ENST00000637769 DMDP11532 3685 aa8.68□□□□□ -1.02
CACNA1A-247ENST00000637769 OTOGQ6ZRI0 2925 aa8.6□□□□□ -1.03
CACNA1A-247ENST00000637769 CUBNO60494 3623 aa8.41□□□□□ -1.06
CACNA1A-247ENST00000637769 TRRAPQ9Y4A5 3859 aa8.34□□□□□ -1.07
CACNA1A-247ENST00000637769 KRTAP10-12P60413 245 aa8.32□□□□□ -1.08
CACNA1A-247ENST00000637769 KRTAP23-1A1A580 65 aa8.32□□□□□ -1.08
CACNA1A-247ENST00000637769 KRTAP3-1Q9BYR8 98 aa8.26□□□□□ -1.09
CACNA1A-247ENST00000637769 SVEP1Q4LDE5 3571 aa8.26□□□□□ -1.09
CACNA1A-247ENST00000637769 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
CACNA1A-247ENST00000637769 VPS13CQ709C8 3753 aa8.26□□□□□ -1.09
CACNA1A-247ENST00000637769 CRCT1Q9UGL9 99 aa8.21□□□□□ -1.09
CACNA1A-247ENST00000637769 CSMD3Q7Z407 3707 aa8.1□□□□□ -1.11
CACNA1A-247ENST00000637769 KRTAP12-3P60328 96 aa8.04□□□□□ -1.12
CACNA1A-247ENST00000637769 AKAP9Q99996 3911 aa8.03□□□□□ -1.12
CACNA1A-247ENST00000637769 MUC3AQ02505 3323 aa8.02□□□□□ -1.13
CACNA1A-247ENST00000637769 CSMD2Q7Z408 3487 aa7.92□□□□□ -1.14
CACNA1A-247ENST00000637769 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
CACNA1A-247ENST00000637769 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
CACNA1A-247ENST00000637769 LCE3AQ5TA76 89 aa7.65□□□□□ -1.18
CACNA1A-247ENST00000637769 KRTAP10-5P60370 271 aa7.63□□□□□ -1.19
CACNA1A-247ENST00000637769 BSNQ9UPA5 3926 aa7.62□□□□□ -1.19
CACNA1A-247ENST00000637769 MT1HL1P0DM35 61 aa7.62□□□□□ -1.19
CACNA1A-247ENST00000637769 KRTAP8-1Q8IUC2 63 aa7.56□□□□□ -1.2
CACNA1A-247ENST00000637769 ALMS1Q8TCU4 4167 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms