RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 K7ERS5 55 aa3.34□□□□□ -1.87
CHD2-227ENST00000637572 DSCR10P59022 87 aa3.34□□□□□ -1.88
CHD2-227ENST00000637572 C7orf65Q6ZTY9 151 aa3.32□□□□□ -1.88
CHD2-227ENST00000637572 A0A0G2JQZ4 141 aa3.32□□□□□ -1.88
CHD2-227ENST00000637572 PANO1I0J062 215 aa3.32□□□□□ -1.88
CHD2-227ENST00000637572 RPS29P62273 56 aaKnown RBP3.31□□□□□ -1.88
CHD2-227ENST00000637572 KLKP1Q107X0 134 aa3.31□□□□□ -1.88
CHD2-227ENST00000637572 IGLV7-46A0A075B6I9 117 aa3.31□□□□□ -1.88
CHD2-227ENST00000637572 FP248Q71RG6 208 aaPredicted RBP3.3□□□□□ -1.88
CHD2-227ENST00000637572 LINC00472Q9H8W2 130 aa3.3□□□□□ -1.88
CHD2-227ENST00000637572 OCR1Q9BZK8 76 aa3.29□□□□□ -1.88
CHD2-227ENST00000637572 HYDINQ4G0P3 5121 aa3.29□□□□□ -1.88
CHD2-227ENST00000637572 ANK3Q12955 4377 aaKnown RBP3.29□□□□□ -1.88
CHD2-227ENST00000637572 C9orf92A6NGG3 77 aa3.29□□□□□ -1.88
CHD2-227ENST00000637572 RPS28P62857 69 aaKnown RBP3.29□□□□□ -1.88
CHD2-227ENST00000637572 ASB16-AS1Q495Z4 193 aa3.29□□□□□ -1.88
CHD2-227ENST00000637572 Q6ZSA8 131 aa3.29□□□□□ -1.88
CHD2-227ENST00000637572 KRTAP13-1Q8IUC0 172 aa3.29□□□□□ -1.88
CHD2-227ENST00000637572 OXTP01178 125 aa3.28□□□□□ -1.88
CHD2-227ENST00000637572 KRTAP7-1Q8IUC3 87 aa3.28□□□□□ -1.88
CHD2-227ENST00000637572 RBM12B-AS1Q9P1G2 102 aa3.28□□□□□ -1.88
CHD2-227ENST00000637572 KRTAP15-1Q3LI76 137 aa3.27□□□□□ -1.89
CHD2-227ENST00000637572 SPANXA2-OT1Q8N9U9 137 aa3.27□□□□□ -1.89
CHD2-227ENST00000637572 Q5XG85 94 aa3.27□□□□□ -1.89
CHD2-227ENST00000637572 MMP24-AS1A0A0U1RRL7 71 aa3.26□□□□□ -1.89
CHD2-227ENST00000637572 A6NED7 52 aa3.26□□□□□ -1.89
CHD2-227ENST00000637572 C1orf195Q5TG92 126 aa3.26□□□□□ -1.89
CHD2-227ENST00000637572 TRRAPQ9Y4A5 3859 aa3.25□□□□□ -1.89
CHD2-227ENST00000637572 A8MUN3 132 aa3.25□□□□□ -1.89
CHD2-227ENST00000637572 XP32Q5T750 250 aa3.25□□□□□ -1.89
CHD2-227ENST00000637572 COX6B2Q6YFQ2 88 aa3.24□□□□□ -1.89
CHD2-227ENST00000637572 ZCCHC13Q8WW36 166 aaKnown RBP3.24□□□□□ -1.89
CHD2-227ENST00000637572 KRTAP11-1Q8IUC1 163 aa3.23□□□□□ -1.89
CHD2-227ENST00000637572 BRK1Q8WUW1 75 aa3.23□□□□□ -1.89
CHD2-227ENST00000637572 A0A1B0GU69 56 aa3.23□□□□□ -1.89
CHD2-227ENST00000637572 A0A087X002 238 aa3.23□□□□□ -1.89
CHD2-227ENST00000637572 BIRC6Q9NR09 4857 aa3.22□□□□□ -1.89
CHD2-227ENST00000637572 H7BZZ5 65 aa3.21□□□□□ -1.89
CHD2-227ENST00000637572 COA5Q86WW8 74 aa3.21□□□□□ -1.9
CHD2-227ENST00000637572 KRTAP19-4Q3LI73 84 aa3.21□□□□□ -1.9
CHD2-227ENST00000637572 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
CHD2-227ENST00000637572 M0R2T5 61 aa3.19□□□□□ -1.9
CHD2-227ENST00000637572 KRTAP4-5Q9BYR2 181 aa3.19□□□□□ -1.9
CHD2-227ENST00000637572 KRTAP13-2Q52LG2 175 aa3.18□□□□□ -1.9
CHD2-227ENST00000637572 CYP4F30PQ9H0H9 118 aa3.18□□□□□ -1.9
CHD2-227ENST00000637572 KRTAP29-1A8MX34 341 aaPredicted RBP3.17□□□□□ -1.9
CHD2-227ENST00000637572 CMYA5Q8N3K9 4069 aa3.17□□□□□ -1.9
CHD2-227ENST00000637572 PSPHP1O15172 72 aa3.17□□□□□ -1.9
CHD2-227ENST00000637572 Q5W150 140 aa3.16□□□□□ -1.9
CHD2-227ENST00000637572 HRES1P13985 223 aa3.16□□□□□ -1.9
CHD2-227ENST00000637572 A0A1B0GVY2 172 aa3.15□□□□□ -1.9
CHD2-227ENST00000637572 SPINK7P58062 85 aa3.15□□□□□ -1.9
CHD2-227ENST00000637572 UQCR11O14957 56 aa3.14□□□□□ -1.91
CHD2-227ENST00000637572 KRTAP1-4P0C5Y4 121 aa3.14□□□□□ -1.91
CHD2-227ENST00000637572 Q8N9P0 234 aaPredicted RBP3.14□□□□□ -1.91
CHD2-227ENST00000637572 ANK2Q01484 3957 aa3.13□□□□□ -1.91
CHD2-227ENST00000637572 C4orf26Q17RF5 130 aa3.11□□□□□ -1.91
CHD2-227ENST00000637572 CSAG1Q6PB30 78 aa3.11□□□□□ -1.91
CHD2-227ENST00000637572 RYR1P21817 5038 aa3.1□□□□□ -1.91
CHD2-227ENST00000637572 KIAA1109Q2LD37 5005 aa3.1□□□□□ -1.91
CHD2-227ENST00000637572 RPL37P61927 97 aaKnown RBP3.09□□□□□ -1.91
CHD2-227ENST00000637572 PMAIP1Q13794 54 aa3.09□□□□□ -1.91
CHD2-227ENST00000637572 PCLOQ9Y6V0 5065 aa3.09□□□□□ -1.91
CHD2-227ENST00000637572 DMAC1Q96GE9 116 aa3.09□□□□□ -1.92
CHD2-227ENST00000637572 S4R3F8 94 aa3.09□□□□□ -1.92
CHD2-227ENST00000637572 NOTCH2NLQ7Z3S9 236 aa3.09□□□□□ -1.92
CHD2-227ENST00000637572 DNAH3Q8TD57 4116 aa3.08□□□□□ -1.92
CHD2-227ENST00000637572 KMT2CQ8NEZ4 4911 aaKnown RBP3.08□□□□□ -1.92
CHD2-227ENST00000637572 A8MUU9 505 aa3.07□□□□□ -1.92
CHD2-227ENST00000637572 Q1T7F1 81 aa3.07□□□□□ -1.92
CHD2-227ENST00000637572 C20orf166-AS1Q96NR2 134 aa3.07□□□□□ -1.92
CHD2-227ENST00000637572 PRO0628Q9UI54 55 aa3.07□□□□□ -1.92
CHD2-227ENST00000637572 MIR22HGQ0VDD5 57 aa3.07□□□□□ -1.92
CHD2-227ENST00000637572 RYR3Q15413 4870 aa3.05□□□□□ -1.92
CHD2-227ENST00000637572 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
CHD2-227ENST00000637572 TPRXLQ17RH7 258 aa3.05□□□□□ -1.92
CHD2-227ENST00000637572 PRKDCP78527 4128 aaKnown RBP3.04□□□□□ -1.92
CHD2-227ENST00000637572 KRTAP10-8P60410 259 aa3.04□□□□□ -1.92
CHD2-227ENST00000637572 A0A1B0GU33 70 aa3.03□□□□□ -1.93
CHD2-227ENST00000637572 H1FX-AS1Q4G0G2 97 aa3.03□□□□□ -1.93
CHD2-227ENST00000637572 EPPK1P58107 5090 aaKnown RBP3.02□□□□□ -1.93
CHD2-227ENST00000637572 HERC2O95714 4834 aa3.02□□□□□ -1.93
CHD2-227ENST00000637572 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
CHD2-227ENST00000637572 CYSTM1Q9H1C7 97 aa3.01□□□□□ -1.93
CHD2-227ENST00000637572 CDC42SE1Q9NRR8 79 aa3.01□□□□□ -1.93
CHD2-227ENST00000637572 RYR2Q92736 4967 aa2.98□□□□□ -1.93
CHD2-227ENST00000637572 HUWE1Q7Z6Z7 4374 aaKnown RBP2.98□□□□□ -1.93
CHD2-227ENST00000637572 KRTAP13-3Q3SY46 172 aa2.97□□□□□ -1.93
CHD2-227ENST00000637572 R4GN34 69 aa2.97□□□□□ -1.93
CHD2-227ENST00000637572 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
CHD2-227ENST00000637572 KRTAP16-1A8MUX0 517 aa2.96□□□□□ -1.94
CHD2-227ENST00000637572 CSMD3Q7Z407 3707 aa2.96□□□□□ -1.94
CHD2-227ENST00000637572 LINC01554Q52M75 96 aa2.96□□□□□ -1.94
CHD2-227ENST00000637572 SPINT4Q6UDR6 99 aa2.95□□□□□ -1.94
CHD2-227ENST00000637572 CRIPTQ9P021 101 aa2.95□□□□□ -1.94
CHD2-227ENST00000637572 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
CHD2-227ENST00000637572 LYSTQ99698 3801 aa2.94□□□□□ -1.94
CHD2-227ENST00000637572 A0A0D9SG42 100 aa2.94□□□□□ -1.94
CHD2-227ENST00000637572 CAMK2N1Q7Z7J9 78 aa2.94□□□□□ -1.94
CHD2-227ENST00000637572 ALMS1Q8TCU4 4167 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms