RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 LINC01554Q52M75 96 aa9.43□□□□□ -0.9
CLN5-218ENST00000637397 LINC00483Q53H64 154 aa9.43□□□□□ -0.9
CLN5-218ENST00000637397 DMDP11532 3685 aa9.42□□□□□ -0.9
CLN5-218ENST00000637397 A0A087X002 238 aa9.42□□□□□ -0.9
CLN5-218ENST00000637397 NOTCH2NLQ7Z3S9 236 aa9.42□□□□□ -0.9
CLN5-218ENST00000637397 CSMD1Q96PZ7 3565 aa9.41□□□□□ -0.9
CLN5-218ENST00000637397 DMAC1Q96GE9 116 aa9.38□□□□□ -0.91
CLN5-218ENST00000637397 SMG1Q96Q15 3661 aaKnown RBP9.35□□□□□ -0.91
CLN5-218ENST00000637397 FLG2Q5D862 2391 aaPredicted RBP9.34□□□□□ -0.91
CLN5-218ENST00000637397 CSAG1Q6PB30 78 aa9.34□□□□□ -0.91
CLN5-218ENST00000637397 A8MU10 97 aa9.33□□□□□ -0.92
CLN5-218ENST00000637397 CELSR1Q9NYQ6 3014 aa9.3□□□□□ -0.92
CLN5-218ENST00000637397 KRTAP10-2P60368 255 aa9.29□□□□□ -0.92
CLN5-218ENST00000637397 KRTAP10-1P60331 282 aa9.25□□□□□ -0.93
CLN5-218ENST00000637397 Q6ZRN7 208 aaPredicted RBP9.21□□□□□ -0.94
CLN5-218ENST00000637397 KRTAP13-1Q8IUC0 172 aa9.2□□□□□ -0.94
CLN5-218ENST00000637397 A6NN06 94 aa9.2□□□□□ -0.94
CLN5-218ENST00000637397 TENM4Q6N022 2769 aa9.19□□□□□ -0.94
CLN5-218ENST00000637397 SVEP1Q4LDE5 3571 aa9.17□□□□□ -0.94
CLN5-218ENST00000637397 TENM3Q9P273 2699 aa9.14□□□□□ -0.95
CLN5-218ENST00000637397 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
CLN5-218ENST00000637397 COX6B2Q6YFQ2 88 aa9.14□□□□□ -0.95
CLN5-218ENST00000637397 H3BS24 57 aa9.13□□□□□ -0.95
CLN5-218ENST00000637397 CUBNO60494 3623 aa9.1□□□□□ -0.95
CLN5-218ENST00000637397 J3QL48 77 aa9.1□□□□□ -0.95
CLN5-218ENST00000637397 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
CLN5-218ENST00000637397 Q6ZSA8 131 aa9.08□□□□□ -0.96
CLN5-218ENST00000637397 H1FX-AS1Q4G0G2 97 aa9.07□□□□□ -0.96
CLN5-218ENST00000637397 ADM2Q7Z4H4 148 aa9.06□□□□□ -0.96
CLN5-218ENST00000637397 S4R3F8 94 aa9.05□□□□□ -0.96
CLN5-218ENST00000637397 RPL37P61927 97 aaKnown RBP9.03□□□□□ -0.96
CLN5-218ENST00000637397 KRTAP13-2Q52LG2 175 aa9.02□□□□□ -0.96
CLN5-218ENST00000637397 TENM1Q9UKZ4 2725 aa9□□□□□ -0.97
CLN5-218ENST00000637397 PDZD2O15018 2839 aa9□□□□□ -0.97
CLN5-218ENST00000637397 ROMO1P60602 79 aa8.97□□□□□ -0.97
CLN5-218ENST00000637397 VWFP04275 2813 aa8.96□□□□□ -0.97
CLN5-218ENST00000637397 CAMK2N1Q7Z7J9 78 aa8.9□□□□□ -0.98
CLN5-218ENST00000637397 SPENQ96T58 3664 aaKnown RBP8.89□□□□□ -0.99
CLN5-218ENST00000637397 FBN1P35555 2871 aaKnown RBP8.88□□□□□ -0.99
CLN5-218ENST00000637397 LUZP6Q538Z0 58 aa8.88□□□□□ -0.99
CLN5-218ENST00000637397 R4GN34 69 aa8.85□□□□□ -0.99
CLN5-218ENST00000637397 Q5VSD8 79 aa8.83□□□□□ -1
CLN5-218ENST00000637397 KRTAP25-1Q3LHN0 102 aa8.81□□□□□ -1
CLN5-218ENST00000637397 TGP01266 2768 aa8.8□□□□□ -1
CLN5-218ENST00000637397 RPS29P62273 56 aaKnown RBP8.79□□□□□ -1
CLN5-218ENST00000637397 PKD1L1Q8TDX9 2849 aa8.76□□□□□ -1.01
CLN5-218ENST00000637397 M0QZ58 72 aa8.74□□□□□ -1.01
CLN5-218ENST00000637397 OTOGQ6ZRI0 2925 aa8.71□□□□□ -1.02
CLN5-218ENST00000637397 CSMD2Q7Z408 3487 aa8.7□□□□□ -1.02
CLN5-218ENST00000637397 NBPF19A0A087WUL8 3843 aa8.69□□□□□ -1.02
CLN5-218ENST00000637397 KRTAP1-4P0C5Y4 121 aa8.65□□□□□ -1.02
CLN5-218ENST00000637397 A8MUU9 505 aa8.63□□□□□ -1.03
CLN5-218ENST00000637397 SEC61BP60468 96 aaKnown RBP8.62□□□□□ -1.03
CLN5-218ENST00000637397 TENM2Q9NT68 2774 aa8.61□□□□□ -1.03
CLN5-218ENST00000637397 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
CLN5-218ENST00000637397 KRTAP16-1A8MUX0 517 aa8.57□□□□□ -1.04
CLN5-218ENST00000637397 ZFHX3Q15911 3703 aa8.56□□□□□ -1.04
CLN5-218ENST00000637397 BSNQ9UPA5 3926 aa8.55□□□□□ -1.04
CLN5-218ENST00000637397 H0YAA0 97 aa8.54□□□□□ -1.04
CLN5-218ENST00000637397 M0R2T5 61 aa8.53□□□□□ -1.04
CLN5-218ENST00000637397 KRTAP13-3Q3SY46 172 aa8.51□□□□□ -1.05
CLN5-218ENST00000637397 A0A0A0MQY5 61 aa8.48□□□□□ -1.05
CLN5-218ENST00000637397 SRRM2Q9UQ35 2752 aaKnown RBP8.48□□□□□ -1.05
CLN5-218ENST00000637397 NDUFAF8A1L188 74 aa8.47□□□□□ -1.05
CLN5-218ENST00000637397 FBN3Q75N90 2809 aa8.41□□□□□ -1.06
CLN5-218ENST00000637397 TRRAPQ9Y4A5 3859 aa8.41□□□□□ -1.06
CLN5-218ENST00000637397 C10orf95Q9H7T3 257 aa8.38□□□□□ -1.07
CLN5-218ENST00000637397 XP32Q5T750 250 aa8.3□□□□□ -1.08
CLN5-218ENST00000637397 ANK3Q12955 4377 aaKnown RBP8.29□□□□□ -1.08
CLN5-218ENST00000637397 VPS13CQ709C8 3753 aa8.28□□□□□ -1.08
CLN5-218ENST00000637397 MEGF8Q7Z7M0 2845 aa8.22□□□□□ -1.09
CLN5-218ENST00000637397 P0C880 135 aa8.21□□□□□ -1.09
CLN5-218ENST00000637397 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
CLN5-218ENST00000637397 COL7A1Q02388 2944 aa8.13□□□□□ -1.11
CLN5-218ENST00000637397 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
CLN5-218ENST00000637397 TNP1P09430 55 aa8.05□□□□□ -1.12
CLN5-218ENST00000637397 KRTAP21-3Q3LHN1 58 aa8.04□□□□□ -1.12
CLN5-218ENST00000637397 TPRXLQ17RH7 258 aa7.97□□□□□ -1.13
CLN5-218ENST00000637397 KRTAP10-8P60410 259 aa7.96□□□□□ -1.13
CLN5-218ENST00000637397 ZNF469Q96JG9 3925 aaPredicted RBP7.94□□□□□ -1.14
CLN5-218ENST00000637397 KRTAP12-2P59991 146 aa7.94□□□□□ -1.14
CLN5-218ENST00000637397 PP632Q6XCG6 107 aa7.94□□□□□ -1.14
CLN5-218ENST00000637397 CSMD3Q7Z407 3707 aa7.91□□□□□ -1.14
CLN5-218ENST00000637397 A0A1B0GVY2 172 aa7.9□□□□□ -1.14
CLN5-218ENST00000637397 KRTAP12-1P59990 96 aa7.82□□□□□ -1.16
CLN5-218ENST00000637397 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
CLN5-218ENST00000637397 KRTAP10-6P60371 365 aaPredicted RBP7.8□□□□□ -1.16
CLN5-218ENST00000637397 AKAP9Q99996 3911 aa7.75□□□□□ -1.17
CLN5-218ENST00000637397 HUWE1Q7Z6Z7 4374 aaKnown RBP7.75□□□□□ -1.17
CLN5-218ENST00000637397 KRTAP3-3Q9BYR6 98 aa7.57□□□□□ -1.2
CLN5-218ENST00000637397 KRTAP3-2Q9BYR7 98 aa7.57□□□□□ -1.2
CLN5-218ENST00000637397 KRTAP10-10P60014 251 aa7.54□□□□□ -1.2
CLN5-218ENST00000637397 KRTAP10-4P60372 401 aaPredicted RBP7.43□□□□□ -1.22
CLN5-218ENST00000637397 DNAH10Q8IVF4 4471 aa7.41□□□□□ -1.22
CLN5-218ENST00000637397 KRTAP15-1Q3LI76 137 aa7.39□□□□□ -1.23
CLN5-218ENST00000637397 DNAH9Q9NYC9 4486 aa7.39□□□□□ -1.23
CLN5-218ENST00000637397 MT1HL1P0DM35 61 aa7.38□□□□□ -1.23
CLN5-218ENST00000637397 PLECQ15149 4684 aaKnown RBP7.37□□□□□ -1.23
CLN5-218ENST00000637397 DNAH1Q9P2D7 4330 aa7.31□□□□□ -1.24
CLN5-218ENST00000637397 DNAH11Q96DT5 4516 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms