RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 BATFQ16520 125 aa7.11□□□□□ -1.27
PNKP-228ENST00000637325 A0A1B0GVX0 72 aa7.1□□□□□ -1.27
PNKP-228ENST00000637325 C8orf87E5RJ46 101 aa7.1□□□□□ -1.27
PNKP-228ENST00000637325 J3KT08 172 aa7.1□□□□□ -1.27
PNKP-228ENST00000637325 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
PNKP-228ENST00000637325 Q6ZQT0 140 aa7.09□□□□□ -1.27
PNKP-228ENST00000637325 LOC110117498A0A087WWA1 95 aa7.07□□□□□ -1.28
PNKP-228ENST00000637325 PDE6GP18545 87 aa7.07□□□□□ -1.28
PNKP-228ENST00000637325 NDUFB1O75438 58 aa7.06□□□□□ -1.28
PNKP-228ENST00000637325 A0A1B0GW54 56 aa7.05□□□□□ -1.28
PNKP-228ENST00000637325 C14orf132Q9NPU4 83 aa7.04□□□□□ -1.28
PNKP-228ENST00000637325 FAM236DA0A1B0GTK5 79 aa7.03□□□□□ -1.28
PNKP-228ENST00000637325 FAM236CP0DP71 79 aa7.03□□□□□ -1.28
PNKP-228ENST00000637325 LOC105371267A0A1B0GV96 52 aa7.01□□□□□ -1.29
PNKP-228ENST00000637325 C9orf118A6NHY6 69 aa7.01□□□□□ -1.29
PNKP-228ENST00000637325 RBM12B-AS1Q9P1G2 102 aa7.01□□□□□ -1.29
PNKP-228ENST00000637325 A8MWP4 228 aa7□□□□□ -1.29
PNKP-228ENST00000637325 NREPQ16612 68 aa6.99□□□□□ -1.29
PNKP-228ENST00000637325 ZCCHC13Q8WW36 166 aaKnown RBP6.98□□□□□ -1.29
PNKP-228ENST00000637325 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
PNKP-228ENST00000637325 A0A1W2PPM0 123 aa6.97□□□□□ -1.29
PNKP-228ENST00000637325 TAX1BP3O14907 124 aa6.97□□□□□ -1.29
PNKP-228ENST00000637325 C8orf17Q9NRJ1 99 aa6.97□□□□□ -1.29
PNKP-228ENST00000637325 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
PNKP-228ENST00000637325 H3BT86 120 aa6.96□□□□□ -1.3
PNKP-228ENST00000637325 HRES1P13985 223 aa6.96□□□□□ -1.3
PNKP-228ENST00000637325 IGKV3D-7A0A0C4DH55 119 aa6.95□□□□□ -1.3
PNKP-228ENST00000637325 MTURNQ8N3F0 131 aa6.95□□□□□ -1.3
PNKP-228ENST00000637325 Q8N9P0 234 aaPredicted RBP6.94□□□□□ -1.3
PNKP-228ENST00000637325 Q6ZVQ6 151 aa6.92□□□□□ -1.3
PNKP-228ENST00000637325 PRR15Q8IV56 129 aa6.92□□□□□ -1.3
PNKP-228ENST00000637325 MPLKIPQ8TAP9 179 aa6.92□□□□□ -1.3
PNKP-228ENST00000637325 SPINK7P58062 85 aa6.91□□□□□ -1.3
PNKP-228ENST00000637325 SPCS1Q9Y6A9 102 aa6.88□□□□□ -1.31
PNKP-228ENST00000637325 MMP24-AS1A0A0U1RRL7 71 aa6.86□□□□□ -1.31
PNKP-228ENST00000637325 BPY2O14599 106 aa6.86□□□□□ -1.31
PNKP-228ENST00000637325 TMEM254Q8TBM7 123 aa6.86□□□□□ -1.31
PNKP-228ENST00000637325 MRPL34Q9BQ48 92 aaKnown RBP6.86□□□□□ -1.31
PNKP-228ENST00000637325 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
PNKP-228ENST00000637325 K7EQZ3 153 aa6.85□□□□□ -1.31
PNKP-228ENST00000637325 hDV103S1A0JD37 113 aa6.84□□□□□ -1.31
PNKP-228ENST00000637325 NDUFS5O43920 106 aa6.84□□□□□ -1.31
PNKP-228ENST00000637325 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
PNKP-228ENST00000637325 WFDC13Q8IUB5 93 aa6.81□□□□□ -1.32
PNKP-228ENST00000637325 SMCPP49901 116 aaPredicted RBP6.79□□□□□ -1.32
PNKP-228ENST00000637325 MT2AP02795 61 aa6.77□□□□□ -1.33
PNKP-228ENST00000637325 K7EP34 96 aa6.75□□□□□ -1.33
PNKP-228ENST00000637325 CASC2Q6XLA1 102 aa6.75□□□□□ -1.33
PNKP-228ENST00000637325 Q8N9L7 120 aa6.75□□□□□ -1.33
PNKP-228ENST00000637325 KRTAP10-10P60014 251 aa6.74□□□□□ -1.33
PNKP-228ENST00000637325 UBL5Q9BZL1 73 aa6.74□□□□□ -1.33
PNKP-228ENST00000637325 PRO0461Q9UI25 63 aa6.74□□□□□ -1.33
PNKP-228ENST00000637325 IGKV2D-30A0A075B6S6 120 aa6.72□□□□□ -1.33
PNKP-228ENST00000637325 IGKV2-30P06310 120 aa6.72□□□□□ -1.33
PNKP-228ENST00000637325 HCG22E2RYF7 251 aa6.71□□□□□ -1.34
PNKP-228ENST00000637325 MT1FP04733 61 aa6.71□□□□□ -1.34
PNKP-228ENST00000637325 GTF2H5Q6ZYL4 71 aa6.71□□□□□ -1.34
PNKP-228ENST00000637325 LINC00846Q9NV44 126 aa6.71□□□□□ -1.34
PNKP-228ENST00000637325 C7orf65Q6ZTY9 151 aa6.7□□□□□ -1.34
PNKP-228ENST00000637325 USH2AO75445 5202 aa6.69□□□□□ -1.34
PNKP-228ENST00000637325 Q5W150 140 aa6.69□□□□□ -1.34
PNKP-228ENST00000637325 PCP4L1A6NKN8 68 aa6.68□□□□□ -1.34
PNKP-228ENST00000637325 H1FX-AS1Q4G0G2 97 aa6.68□□□□□ -1.34
PNKP-228ENST00000637325 CXCL6P80162 114 aa6.67□□□□□ -1.34
PNKP-228ENST00000637325 F8W1H4 67 aa6.64□□□□□ -1.35
PNKP-228ENST00000637325 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
PNKP-228ENST00000637325 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
PNKP-228ENST00000637325 ETDBQ3ZM63 59 aa6.61□□□□□ -1.35
PNKP-228ENST00000637325 LCE2BO14633 110 aa6.6□□□□□ -1.35
PNKP-228ENST00000637325 C4orf26Q17RF5 130 aa6.58□□□□□ -1.36
PNKP-228ENST00000637325 TP53AIP1Q9HCN2 124 aa6.55□□□□□ -1.36
PNKP-228ENST00000637325 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
PNKP-228ENST00000637325 FCGBPQ9Y6R7 5405 aaPredicted RBP6.49□□□□□ -1.37
PNKP-228ENST00000637325 ACYP1P07311 99 aa6.48□□□□□ -1.37
PNKP-228ENST00000637325 C1orf64Q8NEQ6 169 aa6.48□□□□□ -1.37
PNKP-228ENST00000637325 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.47□□□□□ -1.37
PNKP-228ENST00000637325 C5orf47Q569G3 176 aa6.46□□□□□ -1.38
PNKP-228ENST00000637325 S4R3F8 94 aa6.46□□□□□ -1.38
PNKP-228ENST00000637325 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
PNKP-228ENST00000637325 FAM236AA0A1B0GUQ0 79 aa6.41□□□□□ -1.38
PNKP-228ENST00000637325 FAM236BA0A1B0GV22 79 aa6.41□□□□□ -1.38
PNKP-228ENST00000637325 FAM240AA0A1B0GVK7 77 aa6.41□□□□□ -1.38
PNKP-228ENST00000637325 HIST1H4AP62805 103 aaKnown RBP6.41□□□□□ -1.38
PNKP-228ENST00000637325 ATP5EP2Q5VTU8 51 aa6.41□□□□□ -1.38
PNKP-228ENST00000637325 CSAG1Q6PB30 78 aa6.41□□□□□ -1.38
PNKP-228ENST00000637325 TRAV22A0A0B4J277 110 aa6.39□□□□□ -1.39
PNKP-228ENST00000637325 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
PNKP-228ENST00000637325 CYP4F30PQ9H0H9 118 aa6.39□□□□□ -1.39
PNKP-228ENST00000637325 KRTAP19-6Q3LI70 58 aa6.38□□□□□ -1.39
PNKP-228ENST00000637325 LCA10Q71F78 164 aa6.38□□□□□ -1.39
PNKP-228ENST00000637325 LOC101927531A0A1B0GV80 90 aa6.37□□□□□ -1.39
PNKP-228ENST00000637325 UQCRQO14949 82 aa6.34□□□□□ -1.39
PNKP-228ENST00000637325 H0Y9P7 68 aa6.32□□□□□ -1.4
PNKP-228ENST00000637325 LINC00643Q86TS7 51 aa6.32□□□□□ -1.4
PNKP-228ENST00000637325 ATOX1O00244 68 aa6.31□□□□□ -1.4
PNKP-228ENST00000637325 A0A087WVE0 104 aa6.28□□□□□ -1.4
PNKP-228ENST00000637325 A0A1B0GV90 55 aa6.28□□□□□ -1.4
PNKP-228ENST00000637325 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
PNKP-228ENST00000637325 KRTAP3-3Q9BYR6 98 aa6.26□□□□□ -1.41
PNKP-228ENST00000637325 KLKP1Q107X0 134 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms