RNA–Protein interactions for RNA: ENST00000636985.2

SCN2A-214, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5 BASIC

Gene SCN2A, Length 8,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-214ENST00000636985 KRTAP19-4Q3LI73 84 aa2.97□□□□□ -1.93
SCN2A-214ENST00000636985 HTTP42858 3142 aa2.97□□□□□ -1.93
SCN2A-214ENST00000636985 NBEAQ8NFP9 2946 aa2.97□□□□□ -1.93
SCN2A-214ENST00000636985 TENM1Q9UKZ4 2725 aa2.96□□□□□ -1.94
SCN2A-214ENST00000636985 KALRNO60229 2985 aa2.95□□□□□ -1.94
SCN2A-214ENST00000636985 MXRA5Q9NR99 2828 aa2.95□□□□□ -1.94
SCN2A-214ENST00000636985 KRTAP10-6P60371 365 aaPredicted RBP2.94□□□□□ -1.94
SCN2A-214ENST00000636985 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
SCN2A-214ENST00000636985 LRBAP50851 2863 aa2.92□□□□□ -1.94
SCN2A-214ENST00000636985 FRYLO94915 3013 aa2.92□□□□□ -1.94
SCN2A-214ENST00000636985 CFAP54Q96N23 3096 aa2.92□□□□□ -1.94
SCN2A-214ENST00000636985 LAMA2P24043 3122 aaKnown RBP2.91□□□□□ -1.94
SCN2A-214ENST00000636985 FRYQ5TBA9 3013 aa2.91□□□□□ -1.94
SCN2A-214ENST00000636985 CEP350Q5VT06 3117 aa2.9□□□□□ -1.94
SCN2A-214ENST00000636985 ZANQ9Y493 2812 aa2.9□□□□□ -1.94
SCN2A-214ENST00000636985 KRTAP3-1Q9BYR8 98 aa2.9□□□□□ -1.95
SCN2A-214ENST00000636985 NF1P21359 2839 aa2.89□□□□□ -1.95
SCN2A-214ENST00000636985 TENM2Q9NT68 2774 aa2.88□□□□□ -1.95
SCN2A-214ENST00000636985 VPS13AQ96RL7 3174 aa2.88□□□□□ -1.95
SCN2A-214ENST00000636985 CELSR2Q9HCU4 2923 aa2.86□□□□□ -1.95
SCN2A-214ENST00000636985 C5orf42Q9H799 3197 aa2.86□□□□□ -1.95
SCN2A-214ENST00000636985 TRIOO75962 3097 aa2.85□□□□□ -1.95
SCN2A-214ENST00000636985 PCNTO95613 3336 aa2.85□□□□□ -1.95
SCN2A-214ENST00000636985 KRTAP12-3P60328 96 aa2.85□□□□□ -1.95
SCN2A-214ENST00000636985 ZFHX3Q15911 3703 aa2.84□□□□□ -1.96
SCN2A-214ENST00000636985 ZZEF1O43149 2961 aa2.82□□□□□ -1.96
SCN2A-214ENST00000636985 PDZD2O15018 2839 aa2.82□□□□□ -1.96
SCN2A-214ENST00000636985 VWFP04275 2813 aa2.82□□□□□ -1.96
SCN2A-214ENST00000636985 LAMA1P25391 3075 aa2.8□□□□□ -1.96
SCN2A-214ENST00000636985 RANBP2P49792 3224 aaKnown RBP2.8□□□□□ -1.96
SCN2A-214ENST00000636985 SRCAPQ6ZRS2 3230 aa2.8□□□□□ -1.96
SCN2A-214ENST00000636985 ASH1LQ9NR48 2969 aaKnown RBP2.79□□□□□ -1.96
SCN2A-214ENST00000636985 KRTAP3-2Q9BYR7 98 aa2.79□□□□□ -1.96
SCN2A-214ENST00000636985 GOLGB1Q14789 3259 aaKnown RBP2.78□□□□□ -1.96
SCN2A-214ENST00000636985 DCHS2Q6V1P9 2916 aa2.76□□□□□ -1.97
SCN2A-214ENST00000636985 PKD1L1Q8TDX9 2849 aa2.75□□□□□ -1.97
SCN2A-214ENST00000636985 KRTAP3-3Q9BYR6 98 aa2.73□□□□□ -1.97
SCN2A-214ENST00000636985 ATMQ13315 3056 aa2.71□□□□□ -1.98
SCN2A-214ENST00000636985 FBN2P35556 2912 aa2.7□□□□□ -1.98
SCN2A-214ENST00000636985 PRUNE2Q8WUY3 3088 aa2.7□□□□□ -1.98
SCN2A-214ENST00000636985 DMXL1Q9Y485 3027 aa2.7□□□□□ -1.98
SCN2A-214ENST00000636985 USP34Q70CQ2 3546 aa2.69□□□□□ -1.98
SCN2A-214ENST00000636985 SRRM2Q9UQ35 2752 aaKnown RBP2.68□□□□□ -1.98
SCN2A-214ENST00000636985 MEGF8Q7Z7M0 2845 aa2.68□□□□□ -1.98
SCN2A-214ENST00000636985 ADGRG4Q8IZF6 3080 aa2.67□□□□□ -1.98
SCN2A-214ENST00000636985 COL12A1Q99715 3063 aa2.67□□□□□ -1.98
SCN2A-214ENST00000636985 UTRNP46939 3433 aa2.67□□□□□ -1.98
SCN2A-214ENST00000636985 WDFY4Q6ZS81 3184 aa2.66□□□□□ -1.98
SCN2A-214ENST00000636985 MT1HL1P0DM35 61 aa2.66□□□□□ -1.98
SCN2A-214ENST00000636985 ALMS1Q8TCU4 4167 aa2.65□□□□□ -1.99
SCN2A-214ENST00000636985 FBN3Q75N90 2809 aa2.65□□□□□ -1.99
SCN2A-214ENST00000636985 SPTBN5Q9NRC6 3674 aaKnown RBP2.65□□□□□ -1.99
SCN2A-214ENST00000636985 DMXL2Q8TDJ6 3036 aa2.64□□□□□ -1.99
SCN2A-214ENST00000636985 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
SCN2A-214ENST00000636985 EYSQ5T1H1 3165 aa2.63□□□□□ -1.99
SCN2A-214ENST00000636985 OTOGQ6ZRI0 2925 aa2.62□□□□□ -1.99
SCN2A-214ENST00000636985 CRYBG3Q68DQ2 2970 aa2.62□□□□□ -1.99
SCN2A-214ENST00000636985 FREM2Q5SZK8 3169 aa2.61□□□□□ -1.99
SCN2A-214ENST00000636985 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
SCN2A-214ENST00000636985 AKAP9Q99996 3911 aa2.6□□□□□ -1.99
SCN2A-214ENST00000636985 KRTAP10-5P60370 271 aa2.6□□□□□ -1.99
SCN2A-214ENST00000636985 LAMA3Q16787 3333 aa2.59□□□□□ -1.99
SCN2A-214ENST00000636985 MKI67P46013 3256 aaKnown RBP2.57□□□□□ -2
SCN2A-214ENST00000636985 BOD1L1Q8NFC6 3051 aa2.57□□□□□ -2
SCN2A-214ENST00000636985 CRCT1Q9UGL9 99 aa2.56□□□□□ -2
SCN2A-214ENST00000636985 CELSR1Q9NYQ6 3014 aa2.56□□□□□ -2
SCN2A-214ENST00000636985 KRTAP10-4P60372 401 aaPredicted RBP2.56□□□□□ -2
SCN2A-214ENST00000636985 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
SCN2A-214ENST00000636985 REV3LO60673 3130 aa2.52□□□□□ -2.01
SCN2A-214ENST00000636985 KRTAP10-7P60409 375 aaPredicted RBP2.52□□□□□ -2.01
SCN2A-214ENST00000636985 HUWE1Q7Z6Z7 4374 aaKnown RBP2.51□□□□□ -2.01
SCN2A-214ENST00000636985 NBPF19A0A087WUL8 3843 aa2.51□□□□□ -2.01
SCN2A-214ENST00000636985 XIRP2A4UGR9 3374 aa2.49□□□□□ -2.01
SCN2A-214ENST00000636985 LORP23490 312 aaPredicted RBP2.48□□□□□ -2.01
SCN2A-214ENST00000636985 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
SCN2A-214ENST00000636985 CDH23Q9H251 3354 aa2.47□□□□□ -2.01
SCN2A-214ENST00000636985 FBN1P35555 2871 aaKnown RBP2.47□□□□□ -2.01
SCN2A-214ENST00000636985 CFAP47Q6ZTR5 3102 aa2.47□□□□□ -2.01
SCN2A-214ENST00000636985 BRCA2P51587 3418 aa2.46□□□□□ -2.02
SCN2A-214ENST00000636985 TRRAPQ9Y4A5 3859 aa2.46□□□□□ -2.02
SCN2A-214ENST00000636985 DNAH6Q9C0G6 4158 aa2.45□□□□□ -2.02
SCN2A-214ENST00000636985 DNAH14Q0VDD8 3507 aa2.45□□□□□ -2.02
SCN2A-214ENST00000636985 MT3P25713 68 aa2.44□□□□□ -2.02
SCN2A-214ENST00000636985 COL6A3P12111 3177 aa2.44□□□□□ -2.02
SCN2A-214ENST00000636985 SZT2Q5T011 3432 aa2.44□□□□□ -2.02
SCN2A-214ENST00000636985 VCANP13611 3396 aa2.43□□□□□ -2.02
SCN2A-214ENST00000636985 DNAH3Q8TD57 4116 aa2.43□□□□□ -2.02
SCN2A-214ENST00000636985 COL7A1Q02388 2944 aa2.43□□□□□ -2.02
SCN2A-214ENST00000636985 UNC80Q8N2C7 3258 aa2.43□□□□□ -2.02
SCN2A-214ENST00000636985 SPENQ96T58 3664 aaKnown RBP2.42□□□□□ -2.02
SCN2A-214ENST00000636985 ANK2Q01484 3957 aa2.41□□□□□ -2.02
SCN2A-214ENST00000636985 DMDP11532 3685 aa2.41□□□□□ -2.02
SCN2A-214ENST00000636985 CMYA5Q8N3K9 4069 aa2.41□□□□□ -2.02
SCN2A-214ENST00000636985 DNAH7Q8WXX0 4024 aa2.4□□□□□ -2.03
SCN2A-214ENST00000636985 LOC400499M0QZD8 3231 aa2.38□□□□□ -2.03
SCN2A-214ENST00000636985 HECTD4Q9Y4D8 3996 aa2.35□□□□□ -2.03
SCN2A-214ENST00000636985 LAMA5O15230 3695 aa2.35□□□□□ -2.03
SCN2A-214ENST00000636985 VPS13CQ709C8 3753 aa2.34□□□□□ -2.03
SCN2A-214ENST00000636985 MT2AP02795 61 aa2.34□□□□□ -2.03
SCN2A-214ENST00000636985 CUBNO60494 3623 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms