RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 hDV103S1A0JD37 113 aa11.16□□□□□ -0.62
CLN5-216ENST00000636780 ZNF706Q9Y5V0 76 aaPredicted RBP11.14□□□□□ -0.63
CLN5-216ENST00000636780 NDUFS5O43920 106 aa11.14□□□□□ -0.63
CLN5-216ENST00000636780 NDUFB1O75438 58 aa11.14□□□□□ -0.63
CLN5-216ENST00000636780 C1orf64Q8NEQ6 169 aa11.13□□□□□ -0.63
CLN5-216ENST00000636780 MP68P56378 58 aa11.12□□□□□ -0.63
CLN5-216ENST00000636780 C8orf17Q9NRJ1 99 aa11.1□□□□□ -0.63
CLN5-216ENST00000636780 TRAV22A0A0B4J277 110 aa11.09□□□□□ -0.63
CLN5-216ENST00000636780 CD164Q04900 197 aa11.09□□□□□ -0.63
CLN5-216ENST00000636780 PCOTHQ58A44 107 aa11.09□□□□□ -0.63
CLN5-216ENST00000636780 SACSQ9NZJ4 4579 aa11.07□□□□□ -0.64
CLN5-216ENST00000636780 A0A1B0GVX0 72 aa11.05□□□□□ -0.64
CLN5-216ENST00000636780 A8MU10 97 aa11.05□□□□□ -0.64
CLN5-216ENST00000636780 CDK2AP2O75956 126 aa11.04□□□□□ -0.64
CLN5-216ENST00000636780 PSPHP1O15172 72 aa11.03□□□□□ -0.64
CLN5-216ENST00000636780 KRTAP13-2Q52LG2 175 aa11.03□□□□□ -0.64
CLN5-216ENST00000636780 Q1T7F1 81 aa10.99□□□□□ -0.65
CLN5-216ENST00000636780 RETNLBQ9BQ08 111 aa10.99□□□□□ -0.65
CLN5-216ENST00000636780 FAT1Q14517 4588 aa10.98□□□□□ -0.65
CLN5-216ENST00000636780 ASB16-AS1Q495Z4 193 aa10.97□□□□□ -0.65
CLN5-216ENST00000636780 Q6ZSA8 131 aa10.96□□□□□ -0.66
CLN5-216ENST00000636780 Q5W150 140 aa10.95□□□□□ -0.66
CLN5-216ENST00000636780 SMR3BP02814 79 aaPredicted RBP10.94□□□□□ -0.66
CLN5-216ENST00000636780 MRPL34Q9BQ48 92 aaKnown RBP10.94□□□□□ -0.66
CLN5-216ENST00000636780 RBM12B-AS1Q9P1G2 102 aa10.92□□□□□ -0.66
CLN5-216ENST00000636780 DYNC1H1Q14204 4646 aaKnown RBP10.9□□□□□ -0.66
CLN5-216ENST00000636780 KRTAP1-4P0C5Y4 121 aa10.89□□□□□ -0.67
CLN5-216ENST00000636780 A8MUN3 132 aa10.88□□□□□ -0.67
CLN5-216ENST00000636780 CYP4F30PQ9H0H9 118 aa10.88□□□□□ -0.67
CLN5-216ENST00000636780 KMT2CQ8NEZ4 4911 aaKnown RBP10.88□□□□□ -0.67
CLN5-216ENST00000636780 SSBP3-AS1Q7Z2R9 100 aa10.86□□□□□ -0.67
CLN5-216ENST00000636780 PLA2G1BP04054 148 aaKnown RBP10.85□□□□□ -0.67
CLN5-216ENST00000636780 KTN1-AS1Q86SY8 53 aa10.83□□□□□ -0.68
CLN5-216ENST00000636780 TP53AIP1Q9HCN2 124 aa10.82□□□□□ -0.68
CLN5-216ENST00000636780 H3BPC8 53 aa10.81□□□□□ -0.68
CLN5-216ENST00000636780 Q5VV11 94 aa10.8□□□□□ -0.68
CLN5-216ENST00000636780 Q8N9P0 234 aaPredicted RBP10.79□□□□□ -0.68
CLN5-216ENST00000636780 PRR26Q8N8Z3 221 aa10.77□□□□□ -0.69
CLN5-216ENST00000636780 LINC00313P59037 77 aa10.77□□□□□ -0.69
CLN5-216ENST00000636780 IGLV7-46A0A075B6I9 117 aa10.76□□□□□ -0.69
CLN5-216ENST00000636780 COA5Q86WW8 74 aa10.76□□□□□ -0.69
CLN5-216ENST00000636780 SPANXA2-OT1Q8N9U9 137 aa10.76□□□□□ -0.69
CLN5-216ENST00000636780 TYMSOSQ8TAI1 123 aa10.74□□□□□ -0.69
CLN5-216ENST00000636780 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
CLN5-216ENST00000636780 SPTSSBQ8NFR3 76 aa10.73□□□□□ -0.69
CLN5-216ENST00000636780 KRTAP13-3Q3SY46 172 aa10.71□□□□□ -0.69
CLN5-216ENST00000636780 APOBP04114 4563 aaKnown RBP10.71□□□□□ -0.7
CLN5-216ENST00000636780 CHKB-CPT1BH3BT56 60 aa10.69□□□□□ -0.7
CLN5-216ENST00000636780 HRES1P13985 223 aa10.67□□□□□ -0.7
CLN5-216ENST00000636780 RYR2Q92736 4967 aa10.67□□□□□ -0.7
CLN5-216ENST00000636780 SPAG11AQ6PDA7 123 aa10.66□□□□□ -0.7
CLN5-216ENST00000636780 LCA10Q71F78 164 aa10.66□□□□□ -0.7
CLN5-216ENST00000636780 A6NN06 94 aa10.64□□□□□ -0.71
CLN5-216ENST00000636780 KRTAP16-1A8MUX0 517 aa10.63□□□□□ -0.71
CLN5-216ENST00000636780 KRTAP21-3Q3LHN1 58 aa10.62□□□□□ -0.71
CLN5-216ENST00000636780 PRR15LQ9BU68 103 aa10.62□□□□□ -0.71
CLN5-216ENST00000636780 C8orf87E5RJ46 101 aa10.61□□□□□ -0.71
CLN5-216ENST00000636780 LRP1Q07954 4544 aaKnown RBP10.59□□□□□ -0.71
CLN5-216ENST00000636780 IGKV2D-30A0A075B6S6 120 aa10.59□□□□□ -0.71
CLN5-216ENST00000636780 LOC101927531A0A1B0GV80 90 aa10.59□□□□□ -0.71
CLN5-216ENST00000636780 IGKV2-30P06310 120 aa10.59□□□□□ -0.71
CLN5-216ENST00000636780 ATP11AUNQ6ZP68 121 aa10.58□□□□□ -0.72
CLN5-216ENST00000636780 A0A1B0GVY2 172 aa10.55□□□□□ -0.72
CLN5-216ENST00000636780 LIMD2Q9BT23 127 aa10.55□□□□□ -0.72
CLN5-216ENST00000636780 C9orf92A6NGG3 77 aa10.55□□□□□ -0.72
CLN5-216ENST00000636780 LINC00304Q8N9R0 145 aa10.54□□□□□ -0.72
CLN5-216ENST00000636780 A6NED7 52 aa10.52□□□□□ -0.72
CLN5-216ENST00000636780 SPINK1P00995 79 aa10.51□□□□□ -0.73
CLN5-216ENST00000636780 FAM229AH3BQW9 127 aa10.51□□□□□ -0.73
CLN5-216ENST00000636780 RYR3Q15413 4870 aa10.51□□□□□ -0.73
CLN5-216ENST00000636780 C7orf65Q6ZTY9 151 aa10.51□□□□□ -0.73
CLN5-216ENST00000636780 PKHD1L1Q86WI1 4243 aa10.49□□□□□ -0.73
CLN5-216ENST00000636780 Q75L30 129 aa10.49□□□□□ -0.73
CLN5-216ENST00000636780 KRTAP10-4P60372 401 aaPredicted RBP10.49□□□□□ -0.73
CLN5-216ENST00000636780 H3BS24 57 aa10.45□□□□□ -0.74
CLN5-216ENST00000636780 FLG2Q5D862 2391 aaPredicted RBP10.44□□□□□ -0.74
CLN5-216ENST00000636780 CDC42SE1Q9NRR8 79 aa10.43□□□□□ -0.74
CLN5-216ENST00000636780 MYCBP2O75592 4640 aa10.39□□□□□ -0.75
CLN5-216ENST00000636780 ACYP2P14621 99 aa10.38□□□□□ -0.75
CLN5-216ENST00000636780 Q8N1X5 172 aa10.38□□□□□ -0.75
CLN5-216ENST00000636780 DMBT1Q9UGM3 2413 aaPredicted RBP10.37□□□□□ -0.75
CLN5-216ENST00000636780 SPINK7P58062 85 aa10.37□□□□□ -0.75
CLN5-216ENST00000636780 DMAC1Q96GE9 116 aa10.36□□□□□ -0.75
CLN5-216ENST00000636780 PRAC1Q96KF2 57 aa10.35□□□□□ -0.75
CLN5-216ENST00000636780 HSPG2P98160 4391 aa10.34□□□□□ -0.75
CLN5-216ENST00000636780 LINC01558Q9Y6Z2 57 aa10.34□□□□□ -0.75
CLN5-216ENST00000636780 KRTAP17-1Q9BYP8 105 aa10.33□□□□□ -0.76
CLN5-216ENST00000636780 KIAA1109Q2LD37 5005 aa10.3□□□□□ -0.76
CLN5-216ENST00000636780 ADM2Q7Z4H4 148 aa10.27□□□□□ -0.77
CLN5-216ENST00000636780 TNXBP22105 4242 aa10.25□□□□□ -0.77
CLN5-216ENST00000636780 FAT3Q8TDW7 4589 aa10.24□□□□□ -0.77
CLN5-216ENST00000636780 RPS29P62273 56 aaKnown RBP10.18□□□□□ -0.78
CLN5-216ENST00000636780 LINC01554Q52M75 96 aa10.17□□□□□ -0.78
CLN5-216ENST00000636780 Q5VSD8 79 aa10.17□□□□□ -0.78
CLN5-216ENST00000636780 RYR1P21817 5038 aa10.16□□□□□ -0.78
CLN5-216ENST00000636780 EPPK1P58107 5090 aaKnown RBP10.16□□□□□ -0.78
CLN5-216ENST00000636780 A0A1B0GU69 56 aa10.12□□□□□ -0.79
CLN5-216ENST00000636780 A8MUU9 505 aa10.12□□□□□ -0.79
CLN5-216ENST00000636780 C20orf166-AS1Q96NR2 134 aa10.11□□□□□ -0.79
CLN5-216ENST00000636780 KRTAP3-1Q9BYR8 98 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms