RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 UBR5O95071 2799 aaPredicted RBP3.61□□□□□ -1.83
SRGAP1-207ENST00000631006 A8MU10 97 aa3.61□□□□□ -1.83
SRGAP1-207ENST00000631006 A0A1B0GVY2 172 aa3.6□□□□□ -1.83
SRGAP1-207ENST00000631006 COL12A1Q99715 3063 aa3.6□□□□□ -1.83
SRGAP1-207ENST00000631006 KRTAP4-16G5E9R7 235 aaPredicted RBP3.59□□□□□ -1.84
SRGAP1-207ENST00000631006 Q6ZRN7 208 aaPredicted RBP3.57□□□□□ -1.84
SRGAP1-207ENST00000631006 ZZEF1O43149 2961 aa3.57□□□□□ -1.84
SRGAP1-207ENST00000631006 KRTAP13-2Q52LG2 175 aa3.57□□□□□ -1.84
SRGAP1-207ENST00000631006 SZT2Q5T011 3432 aa3.57□□□□□ -1.84
SRGAP1-207ENST00000631006 KRTAP29-1A8MX34 341 aaPredicted RBP3.57□□□□□ -1.84
SRGAP1-207ENST00000631006 CYSTM1Q9H1C7 97 aa3.57□□□□□ -1.84
SRGAP1-207ENST00000631006 KRTAP25-1Q3LHN0 102 aa3.56□□□□□ -1.84
SRGAP1-207ENST00000631006 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
SRGAP1-207ENST00000631006 BOD1L1Q8NFC6 3051 aa3.56□□□□□ -1.84
SRGAP1-207ENST00000631006 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
SRGAP1-207ENST00000631006 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
SRGAP1-207ENST00000631006 TENM1Q9UKZ4 2725 aa3.54□□□□□ -1.84
SRGAP1-207ENST00000631006 P0C880 135 aa3.54□□□□□ -1.84
SRGAP1-207ENST00000631006 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
SRGAP1-207ENST00000631006 NIPBLQ6KC79 2804 aaeCLIP3.53□□□□□ -1.84
SRGAP1-207ENST00000631006 HIVEP1P15822 2718 aa3.53□□□□□ -1.84
SRGAP1-207ENST00000631006 ATMQ13315 3056 aa3.53□□□□□ -1.85
SRGAP1-207ENST00000631006 A6NN06 94 aa3.52□□□□□ -1.85
SRGAP1-207ENST00000631006 TACC2O95359 2948 aa3.51□□□□□ -1.85
SRGAP1-207ENST00000631006 ADGRG4Q8IZF6 3080 aa3.51□□□□□ -1.85
SRGAP1-207ENST00000631006 CELSR2Q9HCU4 2923 aa3.5□□□□□ -1.85
SRGAP1-207ENST00000631006 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
SRGAP1-207ENST00000631006 NF1P21359 2839 aa3.49□□□□□ -1.85
SRGAP1-207ENST00000631006 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
SRGAP1-207ENST00000631006 TNRC18O15417 2968 aaPredicted RBP3.48□□□□□ -1.85
SRGAP1-207ENST00000631006 SPTBN5Q9NRC6 3674 aaKnown RBP3.48□□□□□ -1.85
SRGAP1-207ENST00000631006 XP32Q5T750 250 aa3.47□□□□□ -1.85
SRGAP1-207ENST00000631006 EYSQ5T1H1 3165 aa3.47□□□□□ -1.85
SRGAP1-207ENST00000631006 KRTAP13-1Q8IUC0 172 aa3.46□□□□□ -1.86
SRGAP1-207ENST00000631006 NBPF19A0A087WUL8 3843 aa3.45□□□□□ -1.86
SRGAP1-207ENST00000631006 KRTAP3-3Q9BYR6 98 aa3.45□□□□□ -1.86
SRGAP1-207ENST00000631006 KRTAP3-2Q9BYR7 98 aa3.45□□□□□ -1.86
SRGAP1-207ENST00000631006 NBEAQ8NFP9 2946 aa3.44□□□□□ -1.86
SRGAP1-207ENST00000631006 TPRXLQ17RH7 258 aa3.44□□□□□ -1.86
SRGAP1-207ENST00000631006 ASPMQ8IZT6 3477 aa3.43□□□□□ -1.86
SRGAP1-207ENST00000631006 KRTAP7-1Q8IUC3 87 aa3.43□□□□□ -1.86
SRGAP1-207ENST00000631006 TENM4Q6N022 2769 aa3.42□□□□□ -1.86
SRGAP1-207ENST00000631006 WDFY3Q8IZQ1 3526 aa3.42□□□□□ -1.86
SRGAP1-207ENST00000631006 CELSR1Q9NYQ6 3014 aa3.41□□□□□ -1.86
SRGAP1-207ENST00000631006 DMXL1Q9Y485 3027 aa3.4□□□□□ -1.87
SRGAP1-207ENST00000631006 DCHS2Q6V1P9 2916 aa3.39□□□□□ -1.87
SRGAP1-207ENST00000631006 TENM3Q9P273 2699 aa3.38□□□□□ -1.87
SRGAP1-207ENST00000631006 ZANQ9Y493 2812 aa3.37□□□□□ -1.87
SRGAP1-207ENST00000631006 PKD1L1Q8TDX9 2849 aa3.37□□□□□ -1.87
SRGAP1-207ENST00000631006 ZFHX4Q86UP3 3567 aa3.37□□□□□ -1.87
SRGAP1-207ENST00000631006 MYO15AQ9UKN7 3530 aa3.36□□□□□ -1.87
SRGAP1-207ENST00000631006 VWFP04275 2813 aa3.36□□□□□ -1.87
SRGAP1-207ENST00000631006 HRNRQ86YZ3 2850 aaPredicted RBP3.35□□□□□ -1.87
SRGAP1-207ENST00000631006 LOC400499M0QZD8 3231 aa3.35□□□□□ -1.87
SRGAP1-207ENST00000631006 LCE2DQ5TA82 110 aaPredicted RBP3.34□□□□□ -1.87
SRGAP1-207ENST00000631006 KRTAP1-4P0C5Y4 121 aa3.34□□□□□ -1.88
SRGAP1-207ENST00000631006 PDZD2O15018 2839 aa3.33□□□□□ -1.88
SRGAP1-207ENST00000631006 MXRA5Q9NR99 2828 aa3.33□□□□□ -1.88
SRGAP1-207ENST00000631006 TGP01266 2768 aa3.32□□□□□ -1.88
SRGAP1-207ENST00000631006 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
SRGAP1-207ENST00000631006 LAMA5O15230 3695 aa3.31□□□□□ -1.88
SRGAP1-207ENST00000631006 ZFHX3Q15911 3703 aa3.3□□□□□ -1.88
SRGAP1-207ENST00000631006 FBN2P35556 2912 aa3.29□□□□□ -1.88
SRGAP1-207ENST00000631006 H0YAA0 97 aa3.25□□□□□ -1.89
SRGAP1-207ENST00000631006 TENM2Q9NT68 2774 aa3.21□□□□□ -1.9
SRGAP1-207ENST00000631006 DCHS1Q96JQ0 3298 aa3.21□□□□□ -1.9
SRGAP1-207ENST00000631006 RELNP78509 3460 aa3.2□□□□□ -1.9
SRGAP1-207ENST00000631006 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
SRGAP1-207ENST00000631006 SPENQ96T58 3664 aaKnown RBP3.19□□□□□ -1.9
SRGAP1-207ENST00000631006 SRRM2Q9UQ35 2752 aaKnown RBP3.18□□□□□ -1.9
SRGAP1-207ENST00000631006 KRTAP15-1Q3LI76 137 aa3.17□□□□□ -1.9
SRGAP1-207ENST00000631006 COL7A1Q02388 2944 aa3.15□□□□□ -1.9
SRGAP1-207ENST00000631006 DMDP11532 3685 aa3.15□□□□□ -1.91
SRGAP1-207ENST00000631006 CSMD1Q96PZ7 3565 aa3.15□□□□□ -1.91
SRGAP1-207ENST00000631006 SMG1Q96Q15 3661 aaKnown RBP3.14□□□□□ -1.91
SRGAP1-207ENST00000631006 KRTAP13-4Q3LI77 160 aa3.14□□□□□ -1.91
SRGAP1-207ENST00000631006 MEGF8Q7Z7M0 2845 aa3.12□□□□□ -1.91
SRGAP1-207ENST00000631006 CRCT1Q9UGL9 99 aa3.11□□□□□ -1.91
SRGAP1-207ENST00000631006 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.91
SRGAP1-207ENST00000631006 CUBNO60494 3623 aa3.07□□□□□ -1.92
SRGAP1-207ENST00000631006 KRTAP12-1P59990 96 aa3.02□□□□□ -1.93
SRGAP1-207ENST00000631006 MUC3AQ02505 3323 aa3.02□□□□□ -1.93
SRGAP1-207ENST00000631006 FBN1P35555 2871 aaKnown RBP3.02□□□□□ -1.93
SRGAP1-207ENST00000631006 INE1O15225 51 aa3.01□□□□□ -1.93
SRGAP1-207ENST00000631006 SVEP1Q4LDE5 3571 aa2.99□□□□□ -1.93
SRGAP1-207ENST00000631006 OTOGQ6ZRI0 2925 aa2.98□□□□□ -1.93
SRGAP1-207ENST00000631006 TRRAPQ9Y4A5 3859 aa2.98□□□□□ -1.93
SRGAP1-207ENST00000631006 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
SRGAP1-207ENST00000631006 VPS13CQ709C8 3753 aa2.95□□□□□ -1.94
SRGAP1-207ENST00000631006 FBN3Q75N90 2809 aa2.95□□□□□ -1.94
SRGAP1-207ENST00000631006 LCE2BO14633 110 aa2.94□□□□□ -1.94
SRGAP1-207ENST00000631006 AKAP9Q99996 3911 aa2.93□□□□□ -1.94
SRGAP1-207ENST00000631006 BSNQ9UPA5 3926 aa2.93□□□□□ -1.94
SRGAP1-207ENST00000631006 CSMD2Q7Z408 3487 aa2.93□□□□□ -1.94
SRGAP1-207ENST00000631006 CSMD3Q7Z407 3707 aa2.91□□□□□ -1.94
SRGAP1-207ENST00000631006 KRTAP3-1Q9BYR8 98 aa2.88□□□□□ -1.95
SRGAP1-207ENST00000631006 LCE2CQ5TA81 110 aa2.87□□□□□ -1.95
SRGAP1-207ENST00000631006 KRTAP10-6P60371 365 aaPredicted RBP2.86□□□□□ -1.95
SRGAP1-207ENST00000631006 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
SRGAP1-207ENST00000631006 LORP23490 312 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms