RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 CYSTM1Q9H1C7 97 aa8.17□□□□□ -1.1
UBE3A-220ENST00000630424 Q6ZRN7 208 aaPredicted RBP8.17□□□□□ -1.1
UBE3A-220ENST00000630424 ZFHX4Q86UP3 3567 aa8.14□□□□□ -1.11
UBE3A-220ENST00000630424 Q5VV11 94 aa8.13□□□□□ -1.11
UBE3A-220ENST00000630424 H1FX-AS1Q4G0G2 97 aa8.13□□□□□ -1.11
UBE3A-220ENST00000630424 KRTAP11-1Q8IUC1 163 aa8.13□□□□□ -1.11
UBE3A-220ENST00000630424 ZZEF1O43149 2961 aa8.13□□□□□ -1.11
UBE3A-220ENST00000630424 LRBAP50851 2863 aa8.12□□□□□ -1.11
UBE3A-220ENST00000630424 NOTCH2NLQ7Z3S9 236 aa8.12□□□□□ -1.11
UBE3A-220ENST00000630424 DCHS2Q6V1P9 2916 aa8.12□□□□□ -1.11
UBE3A-220ENST00000630424 CELSR3Q9NYQ7 3312 aa8.1□□□□□ -1.11
UBE3A-220ENST00000630424 SPATA8Q6RVD6 105 aa8.1□□□□□ -1.11
UBE3A-220ENST00000630424 KRTAP21-3Q3LHN1 58 aa8.08□□□□□ -1.12
UBE3A-220ENST00000630424 KRTAP29-1A8MX34 341 aaPredicted RBP8.07□□□□□ -1.12
UBE3A-220ENST00000630424 ROMO1P60602 79 aa8.07□□□□□ -1.12
UBE3A-220ENST00000630424 ADGRG4Q8IZF6 3080 aa8.07□□□□□ -1.12
UBE3A-220ENST00000630424 NF1P21359 2839 aa8.06□□□□□ -1.12
UBE3A-220ENST00000630424 TENM1Q9UKZ4 2725 aa8.05□□□□□ -1.12
UBE3A-220ENST00000630424 ASPMQ8IZT6 3477 aa8.05□□□□□ -1.12
UBE3A-220ENST00000630424 BSNQ9UPA5 3926 aa8.04□□□□□ -1.12
UBE3A-220ENST00000630424 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
UBE3A-220ENST00000630424 KRTAP13-2Q52LG2 175 aa8.03□□□□□ -1.12
UBE3A-220ENST00000630424 C20orf166-AS1Q96NR2 134 aa8.03□□□□□ -1.12
UBE3A-220ENST00000630424 Q5XG85 94 aa8.01□□□□□ -1.13
UBE3A-220ENST00000630424 NBEAQ8NFP9 2946 aa8.01□□□□□ -1.13
UBE3A-220ENST00000630424 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
UBE3A-220ENST00000630424 A0A0A0MQY5 61 aa7.99□□□□□ -1.13
UBE3A-220ENST00000630424 DMXL1Q9Y485 3027 aa7.99□□□□□ -1.13
UBE3A-220ENST00000630424 KRTAP7-1Q8IUC3 87 aa7.98□□□□□ -1.13
UBE3A-220ENST00000630424 TENM2Q9NT68 2774 aa7.98□□□□□ -1.13
UBE3A-220ENST00000630424 A8MUU9 505 aa7.98□□□□□ -1.13
UBE3A-220ENST00000630424 ZANQ9Y493 2812 aa7.97□□□□□ -1.13
UBE3A-220ENST00000630424 CFAP47Q6ZTR5 3102 aa7.97□□□□□ -1.13
UBE3A-220ENST00000630424 LOC400499M0QZD8 3231 aa7.96□□□□□ -1.13
UBE3A-220ENST00000630424 SMG1Q96Q15 3661 aaKnown RBP7.92□□□□□ -1.14
UBE3A-220ENST00000630424 PKD1L1Q8TDX9 2849 aa7.92□□□□□ -1.14
UBE3A-220ENST00000630424 DCHS1Q96JQ0 3298 aa7.9□□□□□ -1.15
UBE3A-220ENST00000630424 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
UBE3A-220ENST00000630424 LAMA5O15230 3695 aa7.88□□□□□ -1.15
UBE3A-220ENST00000630424 A8MU10 97 aa7.84□□□□□ -1.16
UBE3A-220ENST00000630424 VWFP04275 2813 aa7.72□□□□□ -1.17
UBE3A-220ENST00000630424 FBN2P35556 2912 aa7.71□□□□□ -1.17
UBE3A-220ENST00000630424 SRRM2Q9UQ35 2752 aaKnown RBP7.69□□□□□ -1.18
UBE3A-220ENST00000630424 TNP1P09430 55 aa7.69□□□□□ -1.18
UBE3A-220ENST00000630424 H3BS24 57 aa7.67□□□□□ -1.18
UBE3A-220ENST00000630424 PDZD2O15018 2839 aa7.66□□□□□ -1.18
UBE3A-220ENST00000630424 A0A1B0GVY2 172 aa7.66□□□□□ -1.18
UBE3A-220ENST00000630424 XP32Q5T750 250 aa7.64□□□□□ -1.19
UBE3A-220ENST00000630424 ZFHX3Q15911 3703 aa7.63□□□□□ -1.19
UBE3A-220ENST00000630424 MXRA5Q9NR99 2828 aa7.63□□□□□ -1.19
UBE3A-220ENST00000630424 KRTAP1-4P0C5Y4 121 aa7.62□□□□□ -1.19
UBE3A-220ENST00000630424 KRTAP10-8P60410 259 aa7.62□□□□□ -1.19
UBE3A-220ENST00000630424 CSMD1Q96PZ7 3565 aa7.56□□□□□ -1.2
UBE3A-220ENST00000630424 KRTAP25-1Q3LHN0 102 aa7.56□□□□□ -1.2
UBE3A-220ENST00000630424 KRTAP10-10P60014 251 aa7.53□□□□□ -1.2
UBE3A-220ENST00000630424 CELSR1Q9NYQ6 3014 aa7.52□□□□□ -1.21
UBE3A-220ENST00000630424 VPS13CQ709C8 3753 aa7.52□□□□□ -1.21
UBE3A-220ENST00000630424 RELNP78509 3460 aa7.52□□□□□ -1.21
UBE3A-220ENST00000630424 TPRXLQ17RH7 258 aa7.52□□□□□ -1.21
UBE3A-220ENST00000630424 TGP01266 2768 aa7.5□□□□□ -1.21
UBE3A-220ENST00000630424 HRNRQ86YZ3 2850 aaPredicted RBP7.48□□□□□ -1.21
UBE3A-220ENST00000630424 SVEP1Q4LDE5 3571 aa7.48□□□□□ -1.21
UBE3A-220ENST00000630424 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
UBE3A-220ENST00000630424 A6NN06 94 aa7.45□□□□□ -1.22
UBE3A-220ENST00000630424 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
UBE3A-220ENST00000630424 KRTAP16-1A8MUX0 517 aa7.36□□□□□ -1.23
UBE3A-220ENST00000630424 KRTAP13-3Q3SY46 172 aa7.36□□□□□ -1.23
UBE3A-220ENST00000630424 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.24
UBE3A-220ENST00000630424 FBN1P35555 2871 aaKnown RBP7.32□□□□□ -1.24
UBE3A-220ENST00000630424 PP632Q6XCG6 107 aa7.32□□□□□ -1.24
UBE3A-220ENST00000630424 AKAP9Q99996 3911 aa7.23□□□□□ -1.25
UBE3A-220ENST00000630424 FBN3Q75N90 2809 aa7.22□□□□□ -1.25
UBE3A-220ENST00000630424 P0C880 135 aa7.22□□□□□ -1.25
UBE3A-220ENST00000630424 CSMD2Q7Z408 3487 aa7.2□□□□□ -1.26
UBE3A-220ENST00000630424 H0YAA0 97 aa7.19□□□□□ -1.26
UBE3A-220ENST00000630424 ZNF469Q96JG9 3925 aaPredicted RBP7.11□□□□□ -1.27
UBE3A-220ENST00000630424 NBPF19A0A087WUL8 3843 aa7.09□□□□□ -1.27
UBE3A-220ENST00000630424 CUBNO60494 3623 aa7.07□□□□□ -1.28
UBE3A-220ENST00000630424 COL7A1Q02388 2944 aa7.02□□□□□ -1.29
UBE3A-220ENST00000630424 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
UBE3A-220ENST00000630424 ANK3Q12955 4377 aaKnown RBP6.94□□□□□ -1.3
UBE3A-220ENST00000630424 MEGF8Q7Z7M0 2845 aa6.86□□□□□ -1.31
UBE3A-220ENST00000630424 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
UBE3A-220ENST00000630424 KRTAP13-4Q3LI77 160 aa6.74□□□□□ -1.33
UBE3A-220ENST00000630424 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
UBE3A-220ENST00000630424 CMYA5Q8N3K9 4069 aa6.68□□□□□ -1.34
UBE3A-220ENST00000630424 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
UBE3A-220ENST00000630424 MT1HL1P0DM35 61 aa6.62□□□□□ -1.35
UBE3A-220ENST00000630424 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
UBE3A-220ENST00000630424 ANK2Q01484 3957 aa6.6□□□□□ -1.35
UBE3A-220ENST00000630424 DNAH3Q8TD57 4116 aa6.6□□□□□ -1.35
UBE3A-220ENST00000630424 DNAH1Q9P2D7 4330 aa6.57□□□□□ -1.36
UBE3A-220ENST00000630424 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
UBE3A-220ENST00000630424 TRRAPQ9Y4A5 3859 aa6.51□□□□□ -1.37
UBE3A-220ENST00000630424 KRTAP10-6P60371 365 aaPredicted RBP6.47□□□□□ -1.37
UBE3A-220ENST00000630424 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
UBE3A-220ENST00000630424 DNHD1Q96M86 4753 aa6.36□□□□□ -1.39
UBE3A-220ENST00000630424 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
UBE3A-220ENST00000630424 LYSTQ99698 3801 aa6.33□□□□□ -1.4
UBE3A-220ENST00000630424 DYNC2H1Q8NCM8 4307 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms