RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 HTTP42858 3142 aa7.38□□□□□ -1.23
SYNGAP1-208ENST00000629380 ZANQ9Y493 2812 aa7.37□□□□□ -1.23
SYNGAP1-208ENST00000629380 VWFP04275 2813 aa7.37□□□□□ -1.23
SYNGAP1-208ENST00000629380 DCHS2Q6V1P9 2916 aa7.36□□□□□ -1.23
SYNGAP1-208ENST00000629380 RANBP2P49792 3224 aaKnown RBP7.36□□□□□ -1.23
SYNGAP1-208ENST00000629380 WDFY4Q6ZS81 3184 aa7.35□□□□□ -1.23
SYNGAP1-208ENST00000629380 PRUNE2Q8WUY3 3088 aa7.32□□□□□ -1.24
SYNGAP1-208ENST00000629380 COL12A1Q99715 3063 aa7.31□□□□□ -1.24
SYNGAP1-208ENST00000629380 KRTAP11-1Q8IUC1 163 aa7.3□□□□□ -1.24
SYNGAP1-208ENST00000629380 PKD1L1Q8TDX9 2849 aa7.27□□□□□ -1.25
SYNGAP1-208ENST00000629380 NBEAQ8NFP9 2946 aa7.26□□□□□ -1.25
SYNGAP1-208ENST00000629380 PRO2289Q9P1D8 64 aa7.26□□□□□ -1.25
SYNGAP1-208ENST00000629380 DMXL2Q8TDJ6 3036 aa7.26□□□□□ -1.25
SYNGAP1-208ENST00000629380 KRTAP13-2Q52LG2 175 aa7.25□□□□□ -1.25
SYNGAP1-208ENST00000629380 SRRM2Q9UQ35 2752 aaKnown RBP7.25□□□□□ -1.25
SYNGAP1-208ENST00000629380 KRTAP13-1Q8IUC0 172 aa7.22□□□□□ -1.25
SYNGAP1-208ENST00000629380 MXRA5Q9NR99 2828 aa7.2□□□□□ -1.26
SYNGAP1-208ENST00000629380 KRTAP10-8P60410 259 aa7.17□□□□□ -1.26
SYNGAP1-208ENST00000629380 FBN2P35556 2912 aa7.17□□□□□ -1.26
SYNGAP1-208ENST00000629380 LAMA3Q16787 3333 aa7.14□□□□□ -1.27
SYNGAP1-208ENST00000629380 P0C880 135 aa7.13□□□□□ -1.27
SYNGAP1-208ENST00000629380 HRNRQ86YZ3 2850 aaPredicted RBP7.11□□□□□ -1.27
SYNGAP1-208ENST00000629380 TENM2Q9NT68 2774 aa7.1□□□□□ -1.27
SYNGAP1-208ENST00000629380 LAMA1P25391 3075 aa7.06□□□□□ -1.28
SYNGAP1-208ENST00000629380 MKI67P46013 3256 aaKnown RBP7.03□□□□□ -1.28
SYNGAP1-208ENST00000629380 TPRXLQ17RH7 258 aa7.03□□□□□ -1.28
SYNGAP1-208ENST00000629380 XP32Q5T750 250 aa7.02□□□□□ -1.29
SYNGAP1-208ENST00000629380 H0YAA0 97 aa7.01□□□□□ -1.29
SYNGAP1-208ENST00000629380 KRTAP7-1Q8IUC3 87 aa7.01□□□□□ -1.29
SYNGAP1-208ENST00000629380 CELSR1Q9NYQ6 3014 aa7□□□□□ -1.29
SYNGAP1-208ENST00000629380 USP34Q70CQ2 3546 aa6.99□□□□□ -1.29
SYNGAP1-208ENST00000629380 REV3LO60673 3130 aa6.98□□□□□ -1.29
SYNGAP1-208ENST00000629380 COL7A1Q02388 2944 aa6.97□□□□□ -1.29
SYNGAP1-208ENST00000629380 BOD1L1Q8NFC6 3051 aa6.95□□□□□ -1.3
SYNGAP1-208ENST00000629380 XIRP2A4UGR9 3374 aa6.94□□□□□ -1.3
SYNGAP1-208ENST00000629380 FREM2Q5SZK8 3169 aa6.93□□□□□ -1.3
SYNGAP1-208ENST00000629380 KRTAP10-10P60014 251 aa6.93□□□□□ -1.3
SYNGAP1-208ENST00000629380 BRCA2P51587 3418 aa6.92□□□□□ -1.3
SYNGAP1-208ENST00000629380 DMXL1Q9Y485 3027 aa6.88□□□□□ -1.31
SYNGAP1-208ENST00000629380 ADGRG4Q8IZF6 3080 aa6.86□□□□□ -1.31
SYNGAP1-208ENST00000629380 ATMQ13315 3056 aa6.85□□□□□ -1.31
SYNGAP1-208ENST00000629380 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
SYNGAP1-208ENST00000629380 KRTAP1-4P0C5Y4 121 aa6.82□□□□□ -1.32
SYNGAP1-208ENST00000629380 COL6A3P12111 3177 aa6.82□□□□□ -1.32
SYNGAP1-208ENST00000629380 CDH23Q9H251 3354 aa6.76□□□□□ -1.33
SYNGAP1-208ENST00000629380 EYSQ5T1H1 3165 aa6.74□□□□□ -1.33
SYNGAP1-208ENST00000629380 KRTAP13-3Q3SY46 172 aa6.73□□□□□ -1.33
SYNGAP1-208ENST00000629380 MEGF8Q7Z7M0 2845 aa6.7□□□□□ -1.34
SYNGAP1-208ENST00000629380 KRTAP13-4Q3LI77 160 aa6.67□□□□□ -1.34
SYNGAP1-208ENST00000629380 UNC80Q8N2C7 3258 aa6.66□□□□□ -1.34
SYNGAP1-208ENST00000629380 CELSR3Q9NYQ7 3312 aa6.65□□□□□ -1.35
SYNGAP1-208ENST00000629380 SZT2Q5T011 3432 aa6.62□□□□□ -1.35
SYNGAP1-208ENST00000629380 DNAH14Q0VDD8 3507 aa6.6□□□□□ -1.35
SYNGAP1-208ENST00000629380 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
SYNGAP1-208ENST00000629380 SPTBN5Q9NRC6 3674 aaKnown RBP6.57□□□□□ -1.36
SYNGAP1-208ENST00000629380 FBN3Q75N90 2809 aa6.55□□□□□ -1.36
SYNGAP1-208ENST00000629380 FBN1P35555 2871 aaKnown RBP6.52□□□□□ -1.37
SYNGAP1-208ENST00000629380 NBPF19A0A087WUL8 3843 aa6.48□□□□□ -1.37
SYNGAP1-208ENST00000629380 CFAP47Q6ZTR5 3102 aa6.47□□□□□ -1.37
SYNGAP1-208ENST00000629380 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
SYNGAP1-208ENST00000629380 VCANP13611 3396 aa6.47□□□□□ -1.37
SYNGAP1-208ENST00000629380 INE1O15225 51 aa6.43□□□□□ -1.38
SYNGAP1-208ENST00000629380 SPEGQ15772 3267 aa6.41□□□□□ -1.38
SYNGAP1-208ENST00000629380 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
SYNGAP1-208ENST00000629380 ZFHX3Q15911 3703 aa6.34□□□□□ -1.39
SYNGAP1-208ENST00000629380 DMDP11532 3685 aa6.3□□□□□ -1.4
SYNGAP1-208ENST00000629380 OTOGQ6ZRI0 2925 aa6.28□□□□□ -1.4
SYNGAP1-208ENST00000629380 ZFHX4Q86UP3 3567 aa6.27□□□□□ -1.41
SYNGAP1-208ENST00000629380 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
SYNGAP1-208ENST00000629380 MYO15AQ9UKN7 3530 aa6.24□□□□□ -1.41
SYNGAP1-208ENST00000629380 SPENQ96T58 3664 aaKnown RBP6.16□□□□□ -1.42
SYNGAP1-208ENST00000629380 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
SYNGAP1-208ENST00000629380 WDFY3Q8IZQ1 3526 aa6.12□□□□□ -1.43
SYNGAP1-208ENST00000629380 SMG1Q96Q15 3661 aaKnown RBP6.05□□□□□ -1.44
SYNGAP1-208ENST00000629380 AKAP9Q99996 3911 aa6.04□□□□□ -1.44
SYNGAP1-208ENST00000629380 LOC400499M0QZD8 3231 aa6.04□□□□□ -1.44
SYNGAP1-208ENST00000629380 TRRAPQ9Y4A5 3859 aa6□□□□□ -1.45
SYNGAP1-208ENST00000629380 ALMS1Q8TCU4 4167 aa5.98□□□□□ -1.45
SYNGAP1-208ENST00000629380 VPS13CQ709C8 3753 aa5.98□□□□□ -1.45
SYNGAP1-208ENST00000629380 KRTAP3-1Q9BYR8 98 aa5.97□□□□□ -1.45
SYNGAP1-208ENST00000629380 KRTAP10-6P60371 365 aaPredicted RBP5.97□□□□□ -1.45
SYNGAP1-208ENST00000629380 MT1HL1P0DM35 61 aa5.96□□□□□ -1.45
SYNGAP1-208ENST00000629380 LAMA5O15230 3695 aa5.92□□□□□ -1.46
SYNGAP1-208ENST00000629380 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.46
SYNGAP1-208ENST00000629380 DCHS1Q96JQ0 3298 aa5.89□□□□□ -1.47
SYNGAP1-208ENST00000629380 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
SYNGAP1-208ENST00000629380 RELNP78509 3460 aa5.84□□□□□ -1.47
SYNGAP1-208ENST00000629380 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
SYNGAP1-208ENST00000629380 ANK3Q12955 4377 aaKnown RBP5.82□□□□□ -1.48
SYNGAP1-208ENST00000629380 ASPMQ8IZT6 3477 aa5.82□□□□□ -1.48
SYNGAP1-208ENST00000629380 BSNQ9UPA5 3926 aa5.76□□□□□ -1.49
SYNGAP1-208ENST00000629380 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
SYNGAP1-208ENST00000629380 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.49
SYNGAP1-208ENST00000629380 KRTAP3-2Q9BYR7 98 aa5.68□□□□□ -1.5
SYNGAP1-208ENST00000629380 LYSTQ99698 3801 aa5.67□□□□□ -1.5
SYNGAP1-208ENST00000629380 HUWE1Q7Z6Z7 4374 aaKnown RBP5.64□□□□□ -1.51
SYNGAP1-208ENST00000629380 KRTAP3-3Q9BYR6 98 aa5.64□□□□□ -1.51
SYNGAP1-208ENST00000629380 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
SYNGAP1-208ENST00000629380 LCE3AQ5TA76 89 aa5.6□□□□□ -1.51
SYNGAP1-208ENST00000629380 CSMD1Q96PZ7 3565 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms